Information report for UbL404
Gene Details
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Functional Descriptions
- Among the UbL40 family members, UbL404 may have a major role in the regulation of thermosensitive genic male sterility since the expression level of UbL404 was much higher than that of UbL401 and UbL402, consistent with the RNA-seq data in NIL5 and NIL8, and RT–PCR data in AnS-1 (Figs 4a,b and 5d; Supplementary Figs 10, 12, 13 and 15).
Functional Keywords
Literature and News
Homologs
- Actinidia chinensis: Achn077281, Achn051601
- Arabidopsis thaliana: AT3G09790
- Malus domestica: MDP0000263713
- Poncirus trifoliata: Ptrif.0005s0903
- Solanum lycopersicum: Solyc03g083350.3
- Solanum melongena: Sme2.5_04867.1_g00002.1
- Solanum tuberosum: PGSC0003DMG400009125
Sequences
cDNA Sequence
- >LOC_Os09g31031.1
CGGCGCGGCGCACCACTCCACCACCACCACCACCACTCCACCGATCGGCGAGAGCGCGGGGAGATCGTTCGACGGCGGCAAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGAATCAATCTCTTGGATCTCCGTGTGCGCAGCTACCATGTTATGTCCAGTTTAGAAGTACTCCGTAGTTGTTAATCTCTTGGAACTTCGTATGCCCAGCTACCATGTTATGTCCGTAGTCTAGAAGTAGTTGTGGTACTTAGTACGCTTGAGAGCTCTGGGTTGTTGCTTAAAGAAGTTGTAACCCTGCGAAGCTGCGACTGGGATGTTGAACCCTCTATCATCACTCTGAATGAAGAAGTTATCGTTACTAGTAGTAAATTTTTAATCTCCTCCCTTTTATTC - >LOC_Os09g31031.2
CGGCGCGGCGCACCACTCCACCACCACCACCACCACTCCACCGATCGGCGAGAGCGCGGGGAGATCGTTCGACGGCGGCAAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGAATCAATCTCTTGGATCTCCGTGTGCGCAGCTACCATGTTATGTCCAGTTTAGAAGTACTCCGTAGTTGTTAATCTCTTGGAACTTCGTATGCCCAGCTACCATGTTATGTCCGTAGTCTAGAAGTAGTTGTGGTACTTAGTACGCTTGAGAGCTCTGGGTTGTTGCTTAAAGAAGTTGTAACCCTGCGAAGCTGCGACTGGGATGTTGAACCCTCTATCATCACTCTGAATGAAGAAGTTATCGTTACTAGTAGTAAATTTTTAATCTCCTCCCTTTTATTC - >LOC_Os09g31031.3
CGGCGCGGCGCACCACTCCACCACCACCACCACCACTCCACCGATCGGCGAGAGCGCGGGGAGATCGTTCGACGGCGGCAAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGAATCAATCTCTTGGATCTCCGTGTGCGCAGCTACCATGTTATGTCCAGTTTAGAAGTACTCCGTAGTTGTTAATCTCTTGGAACTTCGTATGCCCAGCTACCATGTTATGTCCGTAGTCTAGAAGTAGTTGTGGTACTTAGTACGCTTGAGAGCTCTGGGTTGTTGCTTAAAGAAGTTGTAACCCTGCGAAGCTGCGACTGGGATGTTGAACCCTCTATCATCACTCTGAATGAAGAAGTTATCGTTACTAGTAGTAAATTTTTAATCTCCTCCCTTTTATTC
CDS Sequence
- >LOC_Os09g31031.1
ATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGA - >LOC_Os09g31031.2
ATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGA - >LOC_Os09g31031.3
ATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGA
Protein Sequence
- >LOC_Os09g31031.1
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGSRGGYTIQEPTLRALALKYREKKKVLCTPSHQVSPLPQEEVWPQQGAEVEEEVHQLAFDSVRHWKVFTS* - >LOC_Os09g31031.2
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGSRGGYTIQEPTLRALALKYREKKKVLCTPSHQVSPLPQEEVWPQQGAEVEEEVHQLAFDSVRHWKVFTS* - >LOC_Os09g31031.3
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGSRGGYTIQEPTLRALALKYREKKKVLCTPSHQVSPLPQEEVWPQQGAEVEEEVHQLAFDSVRHWKVFTS*