Information report for Oshox4
Gene Details
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Functional Descriptions
- Oshox4 transcripts were detected in leaf and floral organ primordia but excluded from the shoot apical meristem and the protein was nuclear localized.
- Functional analysis of rice HOMEOBOX4 (Oshox4) gene reveals a negative function in gibberellin responses.
- Over-expression of Oshox4 in rice induced a semi-dwarf phenotype that could not be complemented by applied GA3.
- Interestingly, the expression of YAB1 that is involved in the negative feedback regulation of the GA biosynthesis was upregulated in the Oshox4 over-expressing plants.
- These data together suggest that Oshox4 may be involved in the negative regulation of GA signalling and may play a role to fine tune GA responses in rice.
Functional Keywords
- leaf , gibberellin , shoot , floral , dwarf , meristem , ga , shoot-apical-meristem
Literature and News
Gene Resources
- UniProt: Q6K498
- EMBL: AK099710, AP005574, AP008215
- AlphaFoldDB: Q6K498
- EnsemblPlants: Os09t0470500-01
- Gramene: Os09t0470500-01
- KEGG: dosa:Os09g0470500
- Orthologous matrix: SWWTEPT
- InterPro: IPR000047, IPR001356, IPR003106
- PANTHER: PTHR24326, PTHR24326:SF547
- SUPFAM: SSF46689
- PROSITE: PS00027, PS50071
- Gene3D: 1.10.10.60
- OrthoDB: Q6K498
- SWISS-MODEL: Q6K498
- Conserved Domain Database: cd00086
- eggNOG: KOG0483
Sequences
cDNA Sequence
- >LOC_Os09g29460.1
TTGCGAAAACAGAAAGGAAACCGAGAAAGAGAGAGAGAGAGAGAGAGGTAGGGAGGGAAGAAGAGTCACTCCACACTCCACACTCTCATCCCCTGGTCCCTTTCTTGGATCATGAGAAACCGCGCAACAAAATTGCAATTCTAGGCAGCATTTGGACCGGGGACTTGGCTACGTGGTGTTTGGCCATGGATCGCAGCGTGGAATTAAGACCGGCGAGGACTCAGCGACGGAGGCACCCGCGTCATTCCTACGCTTCTGTGCCCGTCGTCTTCTCGCAGTGAGAGAGAGAGAGAGATCGACCAGGCGTTCACTGAATTTTACTAGAACTCGGCATGAAGCGACCCGGCGGTGCCGGCGGCGGCGGAGGCAGCCCATCGCTCGTCACGATGGCTAATTCTAGTGATGATGGATATGGAGGGGTTGGGATGGAGGCGGAGGGGGACGTGGAGGAGGAGATGATGGCGTGCGGCGGCGGCGGGGAGAAGAAGCGGCGGCTGAGCGTGGAGCAGGTTCGCGCGCTGGAGCGGAGCTTCGAGGTGGAGAACAAGCTTGAGCCTGAGCGGAAGGCGCGGCTGGCGCGCGACCTCGGCCTGCAGCCGCGCCAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCGCGGTGGAAGACCAAGCAGCTCGAGCGCGACTACGCCGCGCTCCGCCATTCCTACGACTCCCTGCGCCTCGATCACGACGCGCTCCGCCGCGACAAGGACGCCCTCCTCGCCGAGATCAAGGAGCTGAAGGCGAAGCTCGGGGACGAGGAGGCGGCGGCGAGCTTCACGTCGGTGAAGGAGGAGCCGGCGGCCTCCGACGGGCCACCGGCGGCGGGATTTGGGTCGTCCGACAGCGACTCAAGCGCGGTGCTGAACGACGTGGACGCGGCCGGCGCCGCGCCCGCGGCGACGGACGCGCTGGCTCCGGAGGCGTGCACGTTTCTCGGCGCGCCGCCCGCCGCGGGCGCGGGCGCGGGCGCAGCGGCGGCGGCGAGCCACGAGGAGGTGTTCTTCCACGGCAATTTCCTCAAGGTGGAGGAGGACGAGACGGGGTTCCTCGACGACGACGAGCCGTGCGGCGGGTTCTTCGCCGACGATCAGCCCCCGCCGCTGTCGTCGTGGTGGGCCGAGCCCACGGAGCACTGGAACTGAAGCAAATCCGGCGTAACCGCAGCCGAGAGAGAGAGTTGGAAAACACTATGCCTGGGGGAATAAAGAATTCTGCAGGAAAGCAGGGTCTTATCTGCAATTTTGTAAAAAAAATGGACCTCTACGTACTTCTCTAGTCTCTTTTGCCAATTCTCGCGCACATTAGCTGTAGCACTGCAGTGTAGTAAAATCCTACTACTCCATTACCTCTCCAATTTCTAGCTCTCACTTCCCTACTTAAACTCATCTGAGCTCTAATGTAAGCATATGCCATCCAAAATGGACCATAAATATGTCACTAGCAGTAGGATGGTAATTAGGACTTTTTGAGGAAGTCTGGCTGAGCAAGGAAGGGGACGACTCAACGAACGGCCCACGGCCTGAACAGTGTCGCTGTTCGGTGGGCCCGGCGGCCACGAGGAGCAGCCGTTGGCTTCTTCCTCACTGACCGGGACTCTCGCCTCGCGGACAGCGATCCGACGACGTCGACCTGCTTTGGCTTCGCGCTTTCCACGGCCACGGCGCCGCCTGCTCCGGCCGCCTCCGCGAAAGCGTCGTTCCCTTTCGGAACTTGGAACAAAAGCTTGTGATTTCACCATGGCGATGTGATGGGATCAGAGCACAACCAGAGTTTCCCAAACCGCCGGGACTAGAGTTACCGCGCCCCGGCGGTAAGGACGGTAACAGCACGAAACCGTGTAAAATTTATCATTAATTATTTTTTAAATTTATTTGAATTTAAGAAGGTTACTACGGTTTTTCTTTTACC
CDS Sequence
- >LOC_Os09g29460.1
ATGAAGCGACCCGGCGGTGCCGGCGGCGGCGGAGGCAGCCCATCGCTCGTCACGATGGCTAATTCTAGTGATGATGGATATGGAGGGGTTGGGATGGAGGCGGAGGGGGACGTGGAGGAGGAGATGATGGCGTGCGGCGGCGGCGGGGAGAAGAAGCGGCGGCTGAGCGTGGAGCAGGTTCGCGCGCTGGAGCGGAGCTTCGAGGTGGAGAACAAGCTTGAGCCTGAGCGGAAGGCGCGGCTGGCGCGCGACCTCGGCCTGCAGCCGCGCCAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCGCGGTGGAAGACCAAGCAGCTCGAGCGCGACTACGCCGCGCTCCGCCATTCCTACGACTCCCTGCGCCTCGATCACGACGCGCTCCGCCGCGACAAGGACGCCCTCCTCGCCGAGATCAAGGAGCTGAAGGCGAAGCTCGGGGACGAGGAGGCGGCGGCGAGCTTCACGTCGGTGAAGGAGGAGCCGGCGGCCTCCGACGGGCCACCGGCGGCGGGATTTGGGTCGTCCGACAGCGACTCAAGCGCGGTGCTGAACGACGTGGACGCGGCCGGCGCCGCGCCCGCGGCGACGGACGCGCTGGCTCCGGAGGCGTGCACGTTTCTCGGCGCGCCGCCCGCCGCGGGCGCGGGCGCGGGCGCAGCGGCGGCGGCGAGCCACGAGGAGGTGTTCTTCCACGGCAATTTCCTCAAGGTGGAGGAGGACGAGACGGGGTTCCTCGACGACGACGAGCCGTGCGGCGGGTTCTTCGCCGACGATCAGCCCCCGCCGCTGTCGTCGTGGTGGGCCGAGCCCACGGAGCACTGGAACTGA
Protein Sequence
- >LOC_Os09g29460.1
MKRPGGAGGGGGSPSLVTMANSSDDGYGGVGMEAEGDVEEEMMACGGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVKEEPAASDGPPAAGFGSSDSDSSAVLNDVDAAGAAPAATDALAPEACTFLGAPPAAGAGAGAAAAASHEEVFFHGNFLKVEEDETGFLDDDEPCGGFFADDQPPPLSSWWAEPTEHWN*