Information report for OsMSH6
Gene Details
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Functional Descriptions
- Our data suggests that OsMSH6 (LOC_Os09g24220) is important in ensuring genome stability by recognizing mismatches that arise spontaneously and provides useful information for investigating the function of the OsMSH6 gene in DNA repair and exploiting MMR mutants in rice induced mutation breeding.
Functional Keywords
Literature and News
- Specific-Locus Amplified Fragment Sequencing Reveals Spontaneous Single-Nucleotide Mutations in Rice OsMsh6 Mutants . DOI: 10.1155/2017/4816973 ; PMID: 28589142
- Effects of OsMSH6 Mutations on Microsatellite Stability and Homeologous Recombination in Rice . DOI: 10.3389/fpls.2020.00220 ; PMID: 32194600
Sequences
cDNA Sequence
- >LOC_Os09g24220.1
ATGGCGTCGCCGTCGTCGCGCCGCCTCAGCAACGGCCGCTCCCCGCTCCTCCGCAAGCAGAGCCAGATCACCGCCTTCTTCTCCTCCCCCACCGCCAAGCCCTCGCCCTCGCCGCTGAACCCTAGGGCGACGAAGCCCCCTCTCGCCGTCCCCTCCCCTCCCCCTCCCAACCCGCCATCCCCGCCGCAGGAGGAGGAGACGGCGGTGGGGAGGCGGCTGCGGGTGTACTGGCCGCTGGACGACGCGTGGTACGAGGGGAGGGTGGAGGGCTACGACGTGGGGTCCAGGCGGCACCGCGTCAGGTACGACGACGGCGAGGAGGAGGTGGTGGACCTCGCGAGCGAGAGGTACGAGTGGGCCGCCGCCGCCGATGAGGAGGAGGTGACCCCGCAGCCGTCGAGGAAGCTGCGGCGGCTCCGGCGGATGTCGGATGCCGCAACGGCCAAGTCACCTGGTGCGGTGGATGGTGGTGGGGGTGGGGATGAGACTGCGGATTCCGCTGAGGAGGAGGACGAGGACTGGAAGAATGATGCTGCGGCAGAGAATGATTCGGAGGAGGTGGAGCTGGATGATGAAGAAGACGATGAGGAGGAGGTTGTTGCTGTGAAAACAAGAAAGGGAAAGAAAAATAACCCTTTGTCGACGTCGGCTTCGACGCCAAAATTAGCATCCGGTTTGGGCTCGGCTTCTATTTCAGGGTCCACATTGTCGAAGAAGAGGAGAAAAGTCGATGCGGGTGCGTTGGACTGCGCTAAAAAGTTCAGCTTTGAACCAGCTAATACCACTGGAAAAGTCGAATTGAAAGTGCCAATCAGCTGTAGCCAGAGGGAGCAGCCGTTAGAGAATGCTCTCACCGCTCTTACTGGAGAGGTCGCCGAGCGCTTTGCGCAGCGGCAAGCAGAAAAGTTTAAATTCCTTGGGGAAGGGCGTAAGGATGCGAAAGGGAGACGACCCGGAAACCCCAACTATGATCCTAGAACTCTTTCCTTGCCTTCCCAGTTCTTGAATAGCTTGACAGGCGGACAGAGGCAATGGTGGGAATTTAAATCACAGCACATGGATAAAGTTCTGTTCTTCAAGTATACTGCTGTCACTGCACAATCCAGCTTTTGTTTTAATTCTTATGGCATAACGGGTGACAAGCCTCACTGTGGATTCCCGGAGAAGAATTTTGAATTGAATTTGGAGAAATTAGCTAAGAAGGGTTATCGAGTTCTGGTTATCGAGCAGACTGAAACACCGGAGCAGCTTGACCTCCGCCGTAAAGAAACTGGTGTAAAAGACAAGGTTGTGAGGCGTGAAATATGTGCAATGGTCACAAAAGGAACATTGACAGAAGGGGAGTCTCTGCTGGCAAATCCAGATCCATCATATCTATTTTCTGTGGCTGAAAGTTATCAGTGTGGTTCAGAGAAGGATCAAGATGGTCATACAATTGGTGTTTGCATAGTTGATGTTTCAACAAGCAAATTTATTGTAGGACAGTTCCAAGATGATGCTGAACGCCATGGGCTATGTTCTATTTTATCTGAGATTAGGCCTGCAGAAATCATAAAACCAGCTAAAATGTTGAGTCCAGAAACTGAGAAAGCACTGAAGAGCAATACGAGAGACCCTTTAATAAACAATTTGCTTCCATCCATGGAGTTCTGGGATGCAGAGAAAACTATTCATGAAATAAAGCAATACTATTGCTCATTGGACACACCTGGTGCCGGTGCACAAATCAGTTCTGCCTATCTGCCTGAGCTATTGAGTGAGCTAATTGAAGCGGGAGACAAAACATATGCACTTTCTGCTCTTGGTGGTTCTTTGTTTTATTTAAGGCAATCCCTTCTGGATGAGAAATTGCTTCCATGTGCTGAGTTTGAGCGCCTTACATGCTCAGGGCTCACCAACCCTATCCGCAAGCATATGATACTTGATGCGGCAGCATTGGAAAATCTGGAAATTTTAGAAAATGCAAGAAATGGTGGTCTCTCAGGGACATTGTATGCGCAGTTAAATCATTGTGTTACTGGATTTGGAAAAAGGTTGCTTAAAAGGTGGATTGCAAGGCCATTGTATGAACGCCAGGCAATACTACAGCGTCAAAGTGCCATCGCTACTTTCAAGGGATCTGGGCATGAATGTGCTATCCAATTCCGTAAGGATCTGTCTCGGCTTCCAGACATGGAGCGCCTACTTGCACGCCTTTTTTCTAGCTGTGATAAGAATGGAAGAAGTTCAAAGTCAGTTGTTCTTTATGAAGATGCATCAAAGAGACTGCTTCATCAGTTTACTGCTGCTCTTCGTGGTTGCCAGCAGATGTTCCAAGCATGCTCTTCTATTAGTATGTTGACAAGCACAGATGGATCTTCTCTATTAAATGATTTGTTATCACTAGGCAAAGGGCTACCACATGTTTCTTCTATTCTGGACCACTTCAGAGATGCATTTGATTGGTCAGAAGCAGACAGGAATGGTCGGATCATACCTCATGAAGGTTGTGATCCTCAATATGATGCTGCTTGCATTGCAATTGAGGAGATTGAATCCAGTCTTCAAAAATACCTGAAGGAACAAAGAAAGCTATTGAGTGATTCATCGGTAAAATATGTAGATGTTGGAAAGGATACGTACCTCCTTGAAGTGTCTGAGAACCTGCGAGGTTCTGTTCCCCATAACTATGAGTTGCAGTCTACAAAAAAGGGTTTCTATCGGTACTGGACGCCAGAAGTAAAAGAATTAATATCAGAACTTTCTAAGGCTGAGGCAGAGAAAGAGGCAAAATTGAAATGCATTCTTCAGAATCTGATTCAACTCTTTGTTGAGCATCACAGCAAGTGGAGACAATTGGTTTCTGTAGTTGCTGAGCTTGATGTTTTGATTAGTCTTGCTATTGCCAGTGATTTTTTTGAGGGACCAACTTGCTGTCCAATTATCAAAGAATCATATGGTCCAGATGATACTCCTACTCTCCATGCAAGAAATTTAGGGCACCCCACCCTCCGAAGTGATTCTTTAGGCAGTGGATCTTTTGTACCCAATGACATTAAGATGGGTGGGCCTGGAAATGCCAGCTTTATTGTTCTTACTGGCCCAAATATGGGTGGAAAATCAACTCTTTTGCGTCAAGTTTGTCTTACCATAATTTTGGCACAGATTGGAGCAAATGTTCCTGCTGAAAGCTTTGAACTTTCTCTTGTTGACCGTATGTTTGTTCGAATGGGAGCAAGGGATCATATTATGGCTGGGCAAAGTACGTTCTTAGTGGAGCTCATGGAAACTGCTTCTGTGCTTTCATCAGCAACCAAGAATTCTCTTGTGGCTTTAGATGAGCTTGGGCGCGGTACATCAACCTCTGATGGACAAGCTATTGCGGCATCTGTTCTAGAATATCTAGTTCATCATGTGCAGTGCCTAGGCTTATTTTCAACACACTACCATAGGTTAGCAGCAGAAAATAAGGATAGCAAGGTATCACTCTGCCATATGGCATGTGAGATAAGCAAGGGAGAAGGAGGTTTGGAAGAAGTTACTTTCCTCTACAAGTTAACGCCTGGTTCATGCCCCAAAAGCTATGGTGTAAATGTTGCTCGATTGGCAGGAATACCTGCATCAGTGCTTCAAAGGGCTAATGAGAAGTCAAGTGACTTCGAGGCCAGTTACGGGAAGCGACCCGGTATAACAAAGAATAAGCCCAGCTGTGCACAGGAGGATAAATTTGCCGCCATCAAGGATCTGTTCCGCGTCGTGAAGGCAATGCATCATCGGGAGGATCATGCATCAAGTTTAGGCATGCTCCATGAAGTGCAGAAGCGTGCTAAGGTGCAGGTCATTGGAGAATAA
CDS Sequence
- >LOC_Os09g24220.1
ATGGCGTCGCCGTCGTCGCGCCGCCTCAGCAACGGCCGCTCCCCGCTCCTCCGCAAGCAGAGCCAGATCACCGCCTTCTTCTCCTCCCCCACCGCCAAGCCCTCGCCCTCGCCGCTGAACCCTAGGGCGACGAAGCCCCCTCTCGCCGTCCCCTCCCCTCCCCCTCCCAACCCGCCATCCCCGCCGCAGGAGGAGGAGACGGCGGTGGGGAGGCGGCTGCGGGTGTACTGGCCGCTGGACGACGCGTGGTACGAGGGGAGGGTGGAGGGCTACGACGTGGGGTCCAGGCGGCACCGCGTCAGGTACGACGACGGCGAGGAGGAGGTGGTGGACCTCGCGAGCGAGAGGTACGAGTGGGCCGCCGCCGCCGATGAGGAGGAGGTGACCCCGCAGCCGTCGAGGAAGCTGCGGCGGCTCCGGCGGATGTCGGATGCCGCAACGGCCAAGTCACCTGGTGCGGTGGATGGTGGTGGGGGTGGGGATGAGACTGCGGATTCCGCTGAGGAGGAGGACGAGGACTGGAAGAATGATGCTGCGGCAGAGAATGATTCGGAGGAGGTGGAGCTGGATGATGAAGAAGACGATGAGGAGGAGGTTGTTGCTGTGAAAACAAGAAAGGGAAAGAAAAATAACCCTTTGTCGACGTCGGCTTCGACGCCAAAATTAGCATCCGGTTTGGGCTCGGCTTCTATTTCAGGGTCCACATTGTCGAAGAAGAGGAGAAAAGTCGATGCGGGTGCGTTGGACTGCGCTAAAAAGTTCAGCTTTGAACCAGCTAATACCACTGGAAAAGTCGAATTGAAAGTGCCAATCAGCTGTAGCCAGAGGGAGCAGCCGTTAGAGAATGCTCTCACCGCTCTTACTGGAGAGGTCGCCGAGCGCTTTGCGCAGCGGCAAGCAGAAAAGTTTAAATTCCTTGGGGAAGGGCGTAAGGATGCGAAAGGGAGACGACCCGGAAACCCCAACTATGATCCTAGAACTCTTTCCTTGCCTTCCCAGTTCTTGAATAGCTTGACAGGCGGACAGAGGCAATGGTGGGAATTTAAATCACAGCACATGGATAAAGTTCTGTTCTTCAAGTATACTGCTGTCACTGCACAATCCAGCTTTTGTTTTAATTCTTATGGCATAACGGGTGACAAGCCTCACTGTGGATTCCCGGAGAAGAATTTTGAATTGAATTTGGAGAAATTAGCTAAGAAGGGTTATCGAGTTCTGGTTATCGAGCAGACTGAAACACCGGAGCAGCTTGACCTCCGCCGTAAAGAAACTGGTGTAAAAGACAAGGTTGTGAGGCGTGAAATATGTGCAATGGTCACAAAAGGAACATTGACAGAAGGGGAGTCTCTGCTGGCAAATCCAGATCCATCATATCTATTTTCTGTGGCTGAAAGTTATCAGTGTGGTTCAGAGAAGGATCAAGATGGTCATACAATTGGTGTTTGCATAGTTGATGTTTCAACAAGCAAATTTATTGTAGGACAGTTCCAAGATGATGCTGAACGCCATGGGCTATGTTCTATTTTATCTGAGATTAGGCCTGCAGAAATCATAAAACCAGCTAAAATGTTGAGTCCAGAAACTGAGAAAGCACTGAAGAGCAATACGAGAGACCCTTTAATAAACAATTTGCTTCCATCCATGGAGTTCTGGGATGCAGAGAAAACTATTCATGAAATAAAGCAATACTATTGCTCATTGGACACACCTGGTGCCGGTGCACAAATCAGTTCTGCCTATCTGCCTGAGCTATTGAGTGAGCTAATTGAAGCGGGAGACAAAACATATGCACTTTCTGCTCTTGGTGGTTCTTTGTTTTATTTAAGGCAATCCCTTCTGGATGAGAAATTGCTTCCATGTGCTGAGTTTGAGCGCCTTACATGCTCAGGGCTCACCAACCCTATCCGCAAGCATATGATACTTGATGCGGCAGCATTGGAAAATCTGGAAATTTTAGAAAATGCAAGAAATGGTGGTCTCTCAGGGACATTGTATGCGCAGTTAAATCATTGTGTTACTGGATTTGGAAAAAGGTTGCTTAAAAGGTGGATTGCAAGGCCATTGTATGAACGCCAGGCAATACTACAGCGTCAAAGTGCCATCGCTACTTTCAAGGGATCTGGGCATGAATGTGCTATCCAATTCCGTAAGGATCTGTCTCGGCTTCCAGACATGGAGCGCCTACTTGCACGCCTTTTTTCTAGCTGTGATAAGAATGGAAGAAGTTCAAAGTCAGTTGTTCTTTATGAAGATGCATCAAAGAGACTGCTTCATCAGTTTACTGCTGCTCTTCGTGGTTGCCAGCAGATGTTCCAAGCATGCTCTTCTATTAGTATGTTGACAAGCACAGATGGATCTTCTCTATTAAATGATTTGTTATCACTAGGCAAAGGGCTACCACATGTTTCTTCTATTCTGGACCACTTCAGAGATGCATTTGATTGGTCAGAAGCAGACAGGAATGGTCGGATCATACCTCATGAAGGTTGTGATCCTCAATATGATGCTGCTTGCATTGCAATTGAGGAGATTGAATCCAGTCTTCAAAAATACCTGAAGGAACAAAGAAAGCTATTGAGTGATTCATCGGTAAAATATGTAGATGTTGGAAAGGATACGTACCTCCTTGAAGTGTCTGAGAACCTGCGAGGTTCTGTTCCCCATAACTATGAGTTGCAGTCTACAAAAAAGGGTTTCTATCGGTACTGGACGCCAGAAGTAAAAGAATTAATATCAGAACTTTCTAAGGCTGAGGCAGAGAAAGAGGCAAAATTGAAATGCATTCTTCAGAATCTGATTCAACTCTTTGTTGAGCATCACAGCAAGTGGAGACAATTGGTTTCTGTAGTTGCTGAGCTTGATGTTTTGATTAGTCTTGCTATTGCCAGTGATTTTTTTGAGGGACCAACTTGCTGTCCAATTATCAAAGAATCATATGGTCCAGATGATACTCCTACTCTCCATGCAAGAAATTTAGGGCACCCCACCCTCCGAAGTGATTCTTTAGGCAGTGGATCTTTTGTACCCAATGACATTAAGATGGGTGGGCCTGGAAATGCCAGCTTTATTGTTCTTACTGGCCCAAATATGGGTGGAAAATCAACTCTTTTGCGTCAAGTTTGTCTTACCATAATTTTGGCACAGATTGGAGCAAATGTTCCTGCTGAAAGCTTTGAACTTTCTCTTGTTGACCGTATGTTTGTTCGAATGGGAGCAAGGGATCATATTATGGCTGGGCAAAGTACGTTCTTAGTGGAGCTCATGGAAACTGCTTCTGTGCTTTCATCAGCAACCAAGAATTCTCTTGTGGCTTTAGATGAGCTTGGGCGCGGTACATCAACCTCTGATGGACAAGCTATTGCGGCATCTGTTCTAGAATATCTAGTTCATCATGTGCAGTGCCTAGGCTTATTTTCAACACACTACCATAGGTTAGCAGCAGAAAATAAGGATAGCAAGGTATCACTCTGCCATATGGCATGTGAGATAAGCAAGGGAGAAGGAGGTTTGGAAGAAGTTACTTTCCTCTACAAGTTAACGCCTGGTTCATGCCCCAAAAGCTATGGTGTAAATGTTGCTCGATTGGCAGGAATACCTGCATCAGTGCTTCAAAGGGCTAATGAGAAGTCAAGTGACTTCGAGGCCAGTTACGGGAAGCGACCCGGTATAACAAAGAATAAGCCCAGCTGTGCACAGGAGGATAAATTTGCCGCCATCAAGGATCTGTTCCGCGTCGTGAAGGCAATGCATCATCGGGAGGATCATGCATCAAGTTTAGGCATGCTCCATGAAGTGCAGAAGCGTGCTAAGGTGCAGGTCATTGGAGAATAA
Protein Sequence
- >LOC_Os09g24220.1
MASPSSRRLSNGRSPLLRKQSQITAFFSSPTAKPSPSPLNPRATKPPLAVPSPPPPNPPSPPQEEETAVGRRLRVYWPLDDAWYEGRVEGYDVGSRRHRVRYDDGEEEVVDLASERYEWAAAADEEEVTPQPSRKLRRLRRMSDAATAKSPGAVDGGGGGDETADSAEEEDEDWKNDAAAENDSEEVELDDEEDDEEEVVAVKTRKGKKNNPLSTSASTPKLASGLGSASISGSTLSKKRRKVDAGALDCAKKFSFEPANTTGKVELKVPISCSQREQPLENALTALTGEVAERFAQRQAEKFKFLGEGRKDAKGRRPGNPNYDPRTLSLPSQFLNSLTGGQRQWWEFKSQHMDKVLFFKYTAVTAQSSFCFNSYGITGDKPHCGFPEKNFELNLEKLAKKGYRVLVIEQTETPEQLDLRRKETGVKDKVVRREICAMVTKGTLTEGESLLANPDPSYLFSVAESYQCGSEKDQDGHTIGVCIVDVSTSKFIVGQFQDDAERHGLCSILSEIRPAEIIKPAKMLSPETEKALKSNTRDPLINNLLPSMEFWDAEKTIHEIKQYYCSLDTPGAGAQISSAYLPELLSELIEAGDKTYALSALGGSLFYLRQSLLDEKLLPCAEFERLTCSGLTNPIRKHMILDAAALENLEILENARNGGLSGTLYAQLNHCVTGFGKRLLKRWIARPLYERQAILQRQSAIATFKGSGHECAIQFRKDLSRLPDMERLLARLFSSCDKNGRSSKSVVLYEDASKRLLHQFTAALRGCQQMFQACSSISMLTSTDGSSLLNDLLSLGKGLPHVSSILDHFRDAFDWSEADRNGRIIPHEGCDPQYDAACIAIEEIESSLQKYLKEQRKLLSDSSVKYVDVGKDTYLLEVSENLRGSVPHNYELQSTKKGFYRYWTPEVKELISELSKAEAEKEAKLKCILQNLIQLFVEHHSKWRQLVSVVAELDVLISLAIASDFFEGPTCCPIIKESYGPDDTPTLHARNLGHPTLRSDSLGSGSFVPNDIKMGGPGNASFIVLTGPNMGGKSTLLRQVCLTIILAQIGANVPAESFELSLVDRMFVRMGARDHIMAGQSTFLVELMETASVLSSATKNSLVALDELGRGTSTSDGQAIAASVLEYLVHHVQCLGLFSTHYHRLAAENKDSKVSLCHMACEISKGEGGLEEVTFLYKLTPGSCPKSYGVNVARLAGIPASVLQRANEKSSDFEASYGKRPGITKNKPSCAQEDKFAAIKDLFRVVKAMHHREDHASSLGMLHEVQKRAKVQVIGE*