Information report for STR1
Gene Details
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Functional Descriptions
- Mutation of either of the Oryza sativa (rice) ABCG transporters blocked arbuscule growth of different AM fungi at a small and stunted stage, recapitulating the phenotype of Medicago truncatula stunted arbuscule 1 and 2 (STR1 and str2) mutants that are deficient in homologous ABCG genes.
- The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice.
- Analogous to STR1 and STR2, at the root cortex level, the antiSTR1 transcript is specifically detected in arbusculated cells, suggesting unexpected modes of STR1 regulation in rice.
- Malnutrition of the fungus underlying limited arbuscular growth was excluded by the absence of complementation of the STR1 phenotype by wild-type nurse plants.
- Strigolactones have previously been hypothesized to operate as intracellular hyphal branching signals and possible substrates of STR1 and STR2.
- However, full arbuscule development in the strigolactone biosynthesis mutants d10 and d17 suggested strigolactones to be unlikely substrates of STR1/STR2.
Functional Keywords
- transporter , root , growth , strigolactone , branching
Literature and News
Gene Resources
- UniProt: G9I8W9
- EMBL: AP014965, JN608807
- AlphaFoldDB: G9I8W9
- EnsemblPlants: Os09t0401100-01
- Gramene: Os09t0401100-01
- KEGG: osa:4346998
- Orthologous matrix: AMRGEIM
- InterPro: IPR003439, IPR003593, IPR013525
- PANTHER: PTHR48041, PTHR48041:SF73
- SUPFAM: SSF52540
- PROSITE: PS00211, PS50893
- Gene3D: 3.40.50.300
- OrthoDB: G9I8W9
- SWISS-MODEL: G9I8W9
- eggNOG: KOG0061
Sequences
cDNA Sequence
- >LOC_Os09g23640.1
ATGCAGCAGCAGCAGCGCAGCCGTGAGATGGCCAGGGCCGGCGAGCCAGCCGCCGCCCACCGCCACCGCGCCGAGAGGGCCGCCGCCGGCGAGCCGGCCACCCGAACTCACCGGACAGAGAGAGCCGGCGAGCCTGCCGCGGCCACCACCACCACCACCACCCGCCGGCCGCCGCCGACGACGACGGAGAGGAAGGAGAGCCTGGAGAGCCTCCTGGACGCGACGGACGCCGCCCGTGGCGGCCGTCGCGGCGGCGGCGGCGTGAAGGCGGCGGTGGCCAGCAGGCAAGGGCTGGAGTTCAAGAACCTGTCGTACAGCGTGGTGAAGAAGCAGAAGAAGGAGGGGGTGAAGGTGAAGAAGGAGGTGTACCTGCTCAACGACATCTCCGGCGAGGCCCCCCGCGGGCAGGTGACGGCGATCCTCGGCCCCAGCGGCGCCGGCAAGTCCACCTTCCTCGACGCCCTCGCCGGCCGGATCGCCAAGGGCAGCCTCGAGGGCTCCGTCCGCATCGACGGCCGAGCTGTCACGACGAGCTACATGAAGCAGATTTCATCCTACGTGATGCAAGATGATCAGTTGTTCCCGATGCTGACGGTGCTGGAGACGCTCACTTTCGCAGCTGAAGTGAGGCTGCCCCCATCACTCTCCAGAGCTGAGAAGCTCAAGCGAGTCTGGGAGCTCATCGATCAGCTTGGTTTGCAGACAACGGCTCACACGTACATTGGGGATGAAGGGACCCGAGGAGTCTCCGGTGGGGAACGCCGGAGGGTGTCGATCGGCATAGACATCATCCACAAACCTTCCCTCCTCTTCCTCGACGAGCCGACCTCCGGTCTCGACTCCACCAGCGCGCACAGCGTGGTGGAGAAGGTGAAGGACATCGCCAGAGGAGGGAGCATTGTGCTCATGACGATTCACCAGCCATCTTTCAGGATCCAGATGCTTCTTGACAGGCTTGTCATCCTCGCAAGGGGAAGGTTGATCTACCTAGGAAGCCCAAGCACACTGCAAACACACCTGGCTGGATTTGGCAGGCCGGTGCCGGATGGTGAGAACAGCATTGAGTATCTCCTGGATGTCATCAAGGAGTACGATGAATCAACATCGGGGCTTGAGCCTCTGGTTGCCTACCAGAGGGACGGCACGAAACCCGACGGCGCCGCGAAAACTCCGGTGCCAAGAACACCGAGAACGCCGCACCAGAAGTCGGTGCAGTTCAGGCAGATCCAACTCAAGAGCAACCAGTTCTCCCTCAACAGCGGCGCCGCCAATGGCAACACCTTCTCCAACTTCGAGTCGTCGTACAATGTCGATGGCGGCGGCGATGACGACGATGAGGATTTTGATAATTCGCTCGAGAGGAAGTTGCAGACGCCGATGCACGCCGGCGGTCCAGCTTCGGGGTACCAGCCGAGGCTGGCGTCACAGTTCTACAAGGATTTCTCGGTCTGGGTCTACCATGGCGTCACCGGGAGCACGCCGCACCGGCGGCCGACATGGACACCGGCGAGAACGCCGGTGTCGAGCTTCCAGCGTGGCCGCGCCGTGACAATGACGCCAACGCCGCAGAACAACCCGCAGCGGCGGCCTCCTCCGCCTCCGTCTCCACATGTGCCGGTGTTCAAGCCGGAGGAGCCGACGTACCACGAGTACGAGCTTGACCTGGAGCCGCCGCTGGACGCGCCGGAAGAGGACTACAACGGCGGCCATCGTCCCAAGTTCGCCAACCCGTGGCCGCGGGAGGTGGCGGTGCTGTCGTGGCGCACGGTGCTCAACGTGGTGCGCACGCCGGAGCTGTTCCTCTCTAGGGAGGTGGTGCTCGCGGCGATGGCGGTCATCCTCTCCACCATGTTCCGCCGCCTCGGCGCCGGCGACGTCCCGACGGTGAACCGGCTGCTCAACTTCTACATCTTCGCCGTCTGCCTCGTCTTCTTCTCCTCCAACGACGCCGTGCCAACCTTCATCCAGGAGCGGTTCATCTTCATCCGGGAGCGGTCGCACAACGCCTACAGGGCGTCGTCCTACGTCGTCGCCTCCCTCGTCGTCTACCTCCCCTTCTTCGCCGTGCAAGGGCTCACCTTCGCCGTGATCACCAAGCTGATGCTCCGGATGGAGAGCAGCCTGCTCCACTTCTGGGTCATCCTCTTCGCCTCCCTCATCACCACCAACGCCTACGTCATGCTCGTCTCGGCGCTCGTCCCCAGCTACATCACCGGCTACGCCGTCGTCATCGCGACGACGGCGCTCTTCTTCCTCACCTGCGGCTTCTTCCTCAAGCGGACGCTCATCCCGGTGGGGTGGAGGTGGCTGCACTACGCCTCCGCGATCAAGTACCCGTTCGAGGCGCTGCTGGTGAGCGAGTTCAAGGGGGGCCGGTGCTACGCCGGCGACCGCGCCGACCTCTCGCCGGGGCCGCTCGGGGGGTTCAAGCCCAGCAGCCTCCGGCGGGAGCTCAACGCCAGCGACGCGGCGTGCCCGTTGATGGGGCAGGACGTGCTCTCCACACTGGACATCACCATTGACAGCATCTGGGTTGATGTTGCCATCCTGCTTGCATGGGGTGTCCTCTATCGCCTCCTCTTCTATGTTGTCTTGAGGTTCTACTCCAAGAATGAGAGGAAGTGA
CDS Sequence
- >LOC_Os09g23640.1
ATGCAGCAGCAGCAGCGCAGCCGTGAGATGGCCAGGGCCGGCGAGCCAGCCGCCGCCCACCGCCACCGCGCCGAGAGGGCCGCCGCCGGCGAGCCGGCCACCCGAACTCACCGGACAGAGAGAGCCGGCGAGCCTGCCGCGGCCACCACCACCACCACCACCCGCCGGCCGCCGCCGACGACGACGGAGAGGAAGGAGAGCCTGGAGAGCCTCCTGGACGCGACGGACGCCGCCCGTGGCGGCCGTCGCGGCGGCGGCGGCGTGAAGGCGGCGGTGGCCAGCAGGCAAGGGCTGGAGTTCAAGAACCTGTCGTACAGCGTGGTGAAGAAGCAGAAGAAGGAGGGGGTGAAGGTGAAGAAGGAGGTGTACCTGCTCAACGACATCTCCGGCGAGGCCCCCCGCGGGCAGGTGACGGCGATCCTCGGCCCCAGCGGCGCCGGCAAGTCCACCTTCCTCGACGCCCTCGCCGGCCGGATCGCCAAGGGCAGCCTCGAGGGCTCCGTCCGCATCGACGGCCGAGCTGTCACGACGAGCTACATGAAGCAGATTTCATCCTACGTGATGCAAGATGATCAGTTGTTCCCGATGCTGACGGTGCTGGAGACGCTCACTTTCGCAGCTGAAGTGAGGCTGCCCCCATCACTCTCCAGAGCTGAGAAGCTCAAGCGAGTCTGGGAGCTCATCGATCAGCTTGGTTTGCAGACAACGGCTCACACGTACATTGGGGATGAAGGGACCCGAGGAGTCTCCGGTGGGGAACGCCGGAGGGTGTCGATCGGCATAGACATCATCCACAAACCTTCCCTCCTCTTCCTCGACGAGCCGACCTCCGGTCTCGACTCCACCAGCGCGCACAGCGTGGTGGAGAAGGTGAAGGACATCGCCAGAGGAGGGAGCATTGTGCTCATGACGATTCACCAGCCATCTTTCAGGATCCAGATGCTTCTTGACAGGCTTGTCATCCTCGCAAGGGGAAGGTTGATCTACCTAGGAAGCCCAAGCACACTGCAAACACACCTGGCTGGATTTGGCAGGCCGGTGCCGGATGGTGAGAACAGCATTGAGTATCTCCTGGATGTCATCAAGGAGTACGATGAATCAACATCGGGGCTTGAGCCTCTGGTTGCCTACCAGAGGGACGGCACGAAACCCGACGGCGCCGCGAAAACTCCGGTGCCAAGAACACCGAGAACGCCGCACCAGAAGTCGGTGCAGTTCAGGCAGATCCAACTCAAGAGCAACCAGTTCTCCCTCAACAGCGGCGCCGCCAATGGCAACACCTTCTCCAACTTCGAGTCGTCGTACAATGTCGATGGCGGCGGCGATGACGACGATGAGGATTTTGATAATTCGCTCGAGAGGAAGTTGCAGACGCCGATGCACGCCGGCGGTCCAGCTTCGGGGTACCAGCCGAGGCTGGCGTCACAGTTCTACAAGGATTTCTCGGTCTGGGTCTACCATGGCGTCACCGGGAGCACGCCGCACCGGCGGCCGACATGGACACCGGCGAGAACGCCGGTGTCGAGCTTCCAGCGTGGCCGCGCCGTGACAATGACGCCAACGCCGCAGAACAACCCGCAGCGGCGGCCTCCTCCGCCTCCGTCTCCACATGTGCCGGTGTTCAAGCCGGAGGAGCCGACGTACCACGAGTACGAGCTTGACCTGGAGCCGCCGCTGGACGCGCCGGAAGAGGACTACAACGGCGGCCATCGTCCCAAGTTCGCCAACCCGTGGCCGCGGGAGGTGGCGGTGCTGTCGTGGCGCACGGTGCTCAACGTGGTGCGCACGCCGGAGCTGTTCCTCTCTAGGGAGGTGGTGCTCGCGGCGATGGCGGTCATCCTCTCCACCATGTTCCGCCGCCTCGGCGCCGGCGACGTCCCGACGGTGAACCGGCTGCTCAACTTCTACATCTTCGCCGTCTGCCTCGTCTTCTTCTCCTCCAACGACGCCGTGCCAACCTTCATCCAGGAGCGGTTCATCTTCATCCGGGAGCGGTCGCACAACGCCTACAGGGCGTCGTCCTACGTCGTCGCCTCCCTCGTCGTCTACCTCCCCTTCTTCGCCGTGCAAGGGCTCACCTTCGCCGTGATCACCAAGCTGATGCTCCGGATGGAGAGCAGCCTGCTCCACTTCTGGGTCATCCTCTTCGCCTCCCTCATCACCACCAACGCCTACGTCATGCTCGTCTCGGCGCTCGTCCCCAGCTACATCACCGGCTACGCCGTCGTCATCGCGACGACGGCGCTCTTCTTCCTCACCTGCGGCTTCTTCCTCAAGCGGACGCTCATCCCGGTGGGGTGGAGGTGGCTGCACTACGCCTCCGCGATCAAGTACCCGTTCGAGGCGCTGCTGGTGAGCGAGTTCAAGGGGGGCCGGTGCTACGCCGGCGACCGCGCCGACCTCTCGCCGGGGCCGCTCGGGGGGTTCAAGCCCAGCAGCCTCCGGCGGGAGCTCAACGCCAGCGACGCGGCGTGCCCGTTGATGGGGCAGGACGTGCTCTCCACACTGGACATCACCATTGACAGCATCTGGGTTGATGTTGCCATCCTGCTTGCATGGGGTGTCCTCTATCGCCTCCTCTTCTATGTTGTCTTGAGGTTCTACTCCAAGAATGAGAGGAAGTGA
Protein Sequence
- >LOC_Os09g23640.1
MQQQQRSREMARAGEPAAAHRHRAERAAAGEPATRTHRTERAGEPAAATTTTTTRRPPPTTTERKESLESLLDATDAARGGRRGGGGVKAAVASRQGLEFKNLSYSVVKKQKKEGVKVKKEVYLLNDISGEAPRGQVTAILGPSGAGKSTFLDALAGRIAKGSLEGSVRIDGRAVTTSYMKQISSYVMQDDQLFPMLTVLETLTFAAEVRLPPSLSRAEKLKRVWELIDQLGLQTTAHTYIGDEGTRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAHSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDRLVILARGRLIYLGSPSTLQTHLAGFGRPVPDGENSIEYLLDVIKEYDESTSGLEPLVAYQRDGTKPDGAAKTPVPRTPRTPHQKSVQFRQIQLKSNQFSLNSGAANGNTFSNFESSYNVDGGGDDDDEDFDNSLERKLQTPMHAGGPASGYQPRLASQFYKDFSVWVYHGVTGSTPHRRPTWTPARTPVSSFQRGRAVTMTPTPQNNPQRRPPPPPSPHVPVFKPEEPTYHEYELDLEPPLDAPEEDYNGGHRPKFANPWPREVAVLSWRTVLNVVRTPELFLSREVVLAAMAVILSTMFRRLGAGDVPTVNRLLNFYIFAVCLVFFSSNDAVPTFIQERFIFIRERSHNAYRASSYVVASLVVYLPFFAVQGLTFAVITKLMLRMESSLLHFWVILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTLIPVGWRWLHYASAIKYPFEALLVSEFKGGRCYAGDRADLSPGPLGGFKPSSLRRELNASDAACPLMGQDVLSTLDITIDSIWVDVAILLAWGVLYRLLFYVVLRFYSKNERK*