Gene Details:

Functional Descriptions:

  • These data suggested that the YLC1 protein may be involved in Chl and lutein accumulation and chloroplast development at early leaf development in rice.
  • Real-time PCR analyses showed that the expression levels of the genes associated with Chl biosynthesis and photosynthesis were affected in YLC1 mutant at different temperatures.
  • In this study, we characterized a rice mutant named young leaf chlorosis 1 (YLC1) from a (6)(0)Co-irradiated population.
  • The Young Leaf Chlorosis 1 (YLC1) gene was isolated via map-based cloning and identified to encode a protein of unknown function belonging to the DUF3353 superfamily.
  • In rice protoplasts, the YLC1 protein displayed a typical chloroplast location pattern.
  • Differential protein abundances of OsV5A and OsV5B in rice seedlings at different leaf developmental stages were also revealed.
  • Deficiency of OsV5A and OsV5B occurred in pre-emerged and emerging leaves in OsV5A seedlings at 22 °C, leading to reduced POR accumulation and chlorophyll content.
  • OsV5A apparently developed a specialized role for regulating POR abundances at the leaf pre-emergence stage while the same function is performed by OsV5B during leaf emergence and expansion.
  • Both OsV5A and OsV5B are localized in the chloroplast envelope and thylakoid membranes.
  • OsV5A and OsV5B interact with two rice PORs (OsPORA and OsPORB) inside chloroplasts and they stabilize OsPORB in vitro under oxidative stress.
  • Map-based cloning revealed that OsV5A is a J-like protein with four transmembrane domains.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os09g21250.1
    ATGCAGGCGACGGCCGCGCTCTTCCTCGTCCGCCCGCTCCCGCGTCCCCACTACCGGTGCTTGCATGGGTTGCGGGGAGGCGTCTCGCTGGCCCCGCCGCGGCGGCGGCTGGTGGCGCGGGGCCCGCGGTGCTCCATGAGCCTCTCCATCGGCGGCGGCGCGGGCGCGGGCGCCGGCGGGGACCGCGGGTTCAGCTACGAGCACGTTCCAGTGTTTCCAAGATACCGGATTCGTGATCCCTACAAGCTTCTTGGTGTTGATCGTGATGCAGCTGAAGAAGAGATCAGGAGTGCTAGAAATTTCCTTATTCAACAGTATGCTGGGCATGAACCAAGTGAAGAAGCTATTGAAGGTGCATACGAGAAGATAATAATGAAGAGCTACCAGCAGCGGAAAAAGACTAAGATTAATCTGAAAACTAAGCTAAAAAAGCGAGTTGAGGAATCCCCGTCATGGGTAAAGGCACTGCTTGGATATTTTGAGGTGCCACAAATGGATATCATTTCAAGAAGATTGTTCTTTTTCGCTTTCATTGCTGGTTGGAGCATAGCGACTTCTGCTGAGAATGGACCTGCATTCCAGCTTGCAATATCTCTCTTCTCGTGCATATATTTCCTTAATGATAAGATGAAGAACCTCATGAGGGCATCAACAACTGGGTTTGGAGTGCTTGTTGGTGGCTGGATAATTGGCTCTCTATTGGTCCCACTTATCCCAACATTCATCATCCCACCCTCTTGGTCCCTTGAGCTACTTACATCATTAGTTGCATATGTCTTCCTGTTCCTGGGTTGCACTTTCCTCAAATGAAAACCTTGTAAATCTTGTAACCGTAAATTGTAGAATTGCTTGCAGAAATTTTGCAACTACTGACATCTCCACTATGGGTCTCGGAAAAGTTTTGTAGAATGACATCACTTTGAGGTTCTCCTCTTCTTCCATATGGTCAAGCCTCAGAATTTTCTGTTCAGCACTTCTCTGAAACAAGAAAATCAATCTGTCCACAACTTCAGGTCATTTTACTCTATCGTTTAGCCTTTTTTCTTTTTGGAACACATTAATCTAATATAACCCGATTGATTATT
CDS Sequence
  • >LOC_Os09g21250.1
    ATGCAGGCGACGGCCGCGCTCTTCCTCGTCCGCCCGCTCCCGCGTCCCCACTACCGGTGCTTGCATGGGTTGCGGGGAGGCGTCTCGCTGGCCCCGCCGCGGCGGCGGCTGGTGGCGCGGGGCCCGCGGTGCTCCATGAGCCTCTCCATCGGCGGCGGCGCGGGCGCGGGCGCCGGCGGGGACCGCGGGTTCAGCTACGAGCACGTTCCAGTGTTTCCAAGATACCGGATTCGTGATCCCTACAAGCTTCTTGGTGTTGATCGTGATGCAGCTGAAGAAGAGATCAGGAGTGCTAGAAATTTCCTTATTCAACAGTATGCTGGGCATGAACCAAGTGAAGAAGCTATTGAAGGTGCATACGAGAAGATAATAATGAAGAGCTACCAGCAGCGGAAAAAGACTAAGATTAATCTGAAAACTAAGCTAAAAAAGCGAGTTGAGGAATCCCCGTCATGGGTAAAGGCACTGCTTGGATATTTTGAGGTGCCACAAATGGATATCATTTCAAGAAGATTGTTCTTTTTCGCTTTCATTGCTGGTTGGAGCATAGCGACTTCTGCTGAGAATGGACCTGCATTCCAGCTTGCAATATCTCTCTTCTCGTGCATATATTTCCTTAATGATAAGATGAAGAACCTCATGAGGGCATCAACAACTGGGTTTGGAGTGCTTGTTGGTGGCTGGATAATTGGCTCTCTATTGGTCCCACTTATCCCAACATTCATCATCCCACCCTCTTGGTCCCTTGAGCTACTTACATCATTAGTTGCATATGTCTTCCTGTTCCTGGGTTGCACTTTCCTCAAATGA
Protein Sequence
  • >LOC_Os09g21250.1
    MQATAALFLVRPLPRPHYRCLHGLRGGVSLAPPRRRLVARGPRCSMSLSIGGGAGAGAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAIEGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFAFIAGWSIATSAENGPAFQLAISLFSCIYFLNDKMKNLMRASTTGFGVLVGGWIIGSLLVPLIPTFIIPPSWSLELLTSLVAYVFLFLGCTFLK*