Information report for OsPHL3
Gene Details
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Functional Descriptions
- OsPHL3 contains a MYB-CC domain, and was localized in the nucleus with transcriptional activation potential.
- Rice lines overexpressing OsPHL3 showed a delayed flowering time in the genetic background of TP309 under both long-day (Beijing) and short-day (Hainan) conditions.
- By contrast, the knockout rice lines of OsPHL3 by CRISPR/Cas9 technology promoted flowering time regardless of genetic backgrounds (i.
- Further analysis indicated that OsPHL3 delayed flowering time by down-regulating the expression of Hd3a and RFT1 through promoting Hd1 under long-day conditions (LDs), or suppressing Ehd1/Hd1 under short-day conditions (SDs).
Functional Keywords
Literature and News
Gene Resources
- UniProt: B9G2Q6
- EMBL: CM000146
- AlphaFoldDB: B9G2Q6
- EnsemblPlants: Os09t0299000-02
- Gramene: Os09t0299000-02
- KEGG: osa:4346660
- InterPro: IPR001005, IPR006447, IPR009057
- PANTHER: PTHR31499, PTHR31499:SF49
- SUPFAM: SSF46689
- PROSITE: PS51294
- Gene3D: 1.10.10.60
- OrthoDB: B9G2Q6
- SWISS-MODEL: B9G2Q6
Sequences
cDNA Sequence
- >LOC_Os09g12750.1
AGATTATACTACAACCCTCCAATCTATAAACACAGAAGTTGAAGAGAGAGAAAGAAGCAATAGAGGAGAGAGAAGAGAAGAGGTCAAGAAGAGAAGCAAGAGGAGAGAGGAGAATCGCTGCCTCTGCCACTGGAAAGCAGCAGCAGCAGGGGAGAGGCAGCAGGCAGCAGCAGAGGAGAAGCAAGAAGCAAGAAAGAGAGAGAAAGCGTTGGGACTTTTCATTGGATCCTCCGCTTTTGGGAGGAGCAGCAAAGGTCTCGTCTTTCCTCTCTTCTTCTCTTCCTTGTTGCCGGCGAGGAGGAAGAAGAAAGAGGAGGAGATGTTCCCGCCTGGGCTGATCCACCACCGGCCGGACGGCGGCGAGGCGGGGCGTGCGGCGGGGGGAGGGCCCAGCCTGGTGCTGACCGCCGATCCCAAGCCCCGCCTCCGGTGGACGGCCGACCTCCACGAGCGCTTCGTCGACGCCGTCGCCCAGCTCGGCGGCCCCGAGAAAGCAACACCTAAAACTATCTTGAGGACAATGGGTGTGAAGGGGCTCACTCTTTTCCACTTGAAGAGTCATCTTCAGAAATATAGACTGGGGAAACAATCTGGAAAAGAGGCATCGGAGCAATCTAAAGATGCATCCTATCTTCTAGATGCCCAAGGTGGAATGAGTGTGTCGCCTAGAGTTTCTACTCAAGATGTTAAAGAAAATCAAGAGGTCAAGGAAGCATTGCGAGCTCAGATGGAAATGCAACGAAGACTGCATGAACAAGTGGAGGTCCAGAAGCATGTGCAGATCAGAATGGAAGCCTACCAGAAGTACATCGACACTTTACTAGAGAAGGCATGCAAGATCGTCTCCGAGCAGCTTGCCTCAAGCGGCTTCAGCATCTCGGACAATGATCTCCCGGAGCTCTCTGGTGGTGTCATGTGCGGCTCCGCTGACACATTGAGCTCCTCCATCTTCCACCAGCTCTCTGTCAGCCCAATCAACCTGCATAGTCCTGAGGGCAAGCCGACGCCCTCGGGCATCGAAGGCCAAATGATCCTCCAGAAGTCACCTGAGCTTAAGCGCAAGTCTTGCTGAGCCGTGTCGTTCGACGCAATCTGGATGTGCAAACACCAGTTTTCTTGTCATGGGGGTAGTCATGTCGAATTTCGGAATTCGAATTTCGGTAAGAAGGGGGGATGCTCTGCCAATCTTGTAGAGGCCATCTTGTTCTCTGGCTAATGCATGCCAACATTGTCAAGTAGCAAGGTTTTCTCTCTTATGTTATCAATCCAATCAGCATATCTTATATAAAATGCCTAATGTGCTAGATCAAGTGCCTTCCTTGATAAATAATATTATTACCGTGAGATTTGGGTTCTGACATGATTAACTGATATATCCATCTGAAACAATTTCGAATATCAGTTCCTAGCTTTCTATGCA - >LOC_Os09g12750.2
AGATTATACTACAACCCTCCAATCTATAAACACAGAAGTTGAAGAGAGAGAAAGAAGCAATAGAGGAGAGAGAAGAGAAGAGGTCAAGAAGAGAAGCAAGAGGAGAGAGGAGAATCGCTGCCTCTGCCACTGGAAAGCAGCAGCAGCAGGGGAGAGGCAGCAGGCAGCAGCAGAGGAGAAGCAAGAAGCAAGAAAGAGAGAGAAAGCGTTGGGACTTTTCATTGGATCCTCCGCTTTTGGGAGGAGCAGCAAAGGTCTCGTCTTTCCTCTCTTCTTCTCTTCCTTGTTGCCGGCGAGGAGGAAGAAGAAAGAGGAGGAGATGTTCCCGCCTGGGCTGATCCACCACCGGCCGGACGGCGGCGAGGCGGGGCGTGCGGCGGGGGGAGGGCCCAGCCTGGTGCTGACCGCCGATCCCAAGCCCCGCCTCCGGTGGACGGCCGACCTCCACGAGCGCTTCGTCGACGCCGTCGCCCAGCTCGGCGGCCCCGAGAAAGCAACACCTAAAACTATCTTGAGGACAATGGGTGTGAAGGGGCTCACTCTTTTCCACTTGAAGAGTCATCTTCAGAAATATAGACTGGGGAAACAATCTGGAAAAGAGGCATCGGAGCAATCTAAAGATGCATCCTATCTTCTAGATGCCCAAGGTGGAATGAGTGTGTCGCCTAGAGTTTCTACTCAAGATGTTAAAGAAAATCAAGAGGTCAAGGAAGCATTGCGAGCTCAGATGGAAATGCAACGAAGACTGCATGAACAAGTGGAGGTCCAGAAGCATGTGCAGATCAGAATGGAAGCCTACCAGAAGTACATCGACACTTTACTAGAGAAGGCATGCAAGATCGTCTCCGAGCAGCTTGCCTCAAGCGGCTTCAGCATCTCGGACAATGATCTCCCGGAGCTCTCTGGTGGTGTCATGTGCGGCTCCGCTGACACATTGAGCTCCTCCATCTTCCACCAGCTCTCTGTCAGCCCAATCAACCTGCATAGTCCTGAGGGCAAGCCGACGCCCTCGGGCATCGAAGGCCAAATGATCCTCCAGAAGTCACCTGAGCTTAAGCGCAAGTCTTGCTGAGCCGTGTCGTTCGACGCAATCTGGATGTGCAAACACCAGTTTTCTTGTCATGGGGGTAGTCATGTCGAATTTCGGAATTCGAATTTCGGTAAGAAGGGGGGATGCTCTGCCAATCTTGTAGAGGCCATCTTGTTCTCTGGCTAATGCATGCCAACATTGTCAAGTAGCAAGGTTTTCTCTCTTATGTTATCAATCCAATCAGCATATCTTATATAAAATGCCTAATGTGCTAGATCAAGTGCCTTCCTTGATAAATAATATTATTACCGTGAGATTTGGGTTCTGACATGATTAACTGATATATCCATCTGAAACAATTTCGAATATCAGTTCCTAGCTTTCTATGCA
CDS Sequence
- >LOC_Os09g12750.1
ATGTTCCCGCCTGGGCTGATCCACCACCGGCCGGACGGCGGCGAGGCGGGGCGTGCGGCGGGGGGAGGGCCCAGCCTGGTGCTGACCGCCGATCCCAAGCCCCGCCTCCGGTGGACGGCCGACCTCCACGAGCGCTTCGTCGACGCCGTCGCCCAGCTCGGCGGCCCCGAGAAAGCAACACCTAAAACTATCTTGAGGACAATGGGTGTGAAGGGGCTCACTCTTTTCCACTTGAAGAGTCATCTTCAGAAATATAGACTGGGGAAACAATCTGGAAAAGAGGCATCGGAGCAATCTAAAGATGCATCCTATCTTCTAGATGCCCAAGGTGGAATGAGTGTGTCGCCTAGAGTTTCTACTCAAGATGTTAAAGAAAATCAAGAGGTCAAGGAAGCATTGCGAGCTCAGATGGAAATGCAACGAAGACTGCATGAACAAGTGGAGGTCCAGAAGCATGTGCAGATCAGAATGGAAGCCTACCAGAAGTACATCGACACTTTACTAGAGAAGGCATGCAAGATCGTCTCCGAGCAGCTTGCCTCAAGCGGCTTCAGCATCTCGGACAATGATCTCCCGGAGCTCTCTGGTGGTGTCATGTGCGGCTCCGCTGACACATTGAGCTCCTCCATCTTCCACCAGCTCTCTGTCAGCCCAATCAACCTGCATAGTCCTGAGGGCAAGCCGACGCCCTCGGGCATCGAAGGCCAAATGATCCTCCAGAAGTCACCTGAGCTTAAGCGCAAGTCTTGCTGA - >LOC_Os09g12750.2
ATGTTCCCGCCTGGGCTGATCCACCACCGGCCGGACGGCGGCGAGGCGGGGCGTGCGGCGGGGGGAGGGCCCAGCCTGGTGCTGACCGCCGATCCCAAGCCCCGCCTCCGGTGGACGGCCGACCTCCACGAGCGCTTCGTCGACGCCGTCGCCCAGCTCGGCGGCCCCGAGAAAGCAACACCTAAAACTATCTTGAGGACAATGGGTGTGAAGGGGCTCACTCTTTTCCACTTGAAGAGTCATCTTCAGAAATATAGACTGGGGAAACAATCTGGAAAAGAGGCATCGGAGCAATCTAAAGATGCATCCTATCTTCTAGATGCCCAAGGTGGAATGAGTGTGTCGCCTAGAGTTTCTACTCAAGATGTTAAAGAAAATCAAGAGGTCAAGGAAGCATTGCGAGCTCAGATGGAAATGCAACGAAGACTGCATGAACAAGTGGAGGTCCAGAAGCATGTGCAGATCAGAATGGAAGCCTACCAGAAGTACATCGACACTTTACTAGAGAAGGCATGCAAGATCGTCTCCGAGCAGCTTGCCTCAAGCGGCTTCAGCATCTCGGACAATGATCTCCCGGAGCTCTCTGGTGGTGTCATGTGCGGCTCCGCTGACACATTGAGCTCCTCCATCTTCCACCAGCTCTCTGTCAGCCCAATCAACCTGCATAGTCCTGAGGGCAAGCCGACGCCCTCGGGCATCGAAGGCCAAATGATCCTCCAGAAGTCACCTGAGCTTAAGCGCAAGTCTTGCTGA
Protein Sequence
- >LOC_Os09g12750.1
MFPPGLIHHRPDGGEAGRAAGGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPKTILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEASEQSKDASYLLDAQGGMSVSPRVSTQDVKENQEVKEALRAQMEMQRRLHEQVEVQKHVQIRMEAYQKYIDTLLEKACKIVSEQLASSGFSISDNDLPELSGGVMCGSADTLSSSIFHQLSVSPINLHSPEGKPTPSGIEGQMILQKSPELKRKSC* - >LOC_Os09g12750.2
MFPPGLIHHRPDGGEAGRAAGGGPSLVLTADPKPRLRWTADLHERFVDAVAQLGGPEKATPKTILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEASEQSKDASYLLDAQGGMSVSPRVSTQDVKENQEVKEALRAQMEMQRRLHEQVEVQKHVQIRMEAYQKYIDTLLEKACKIVSEQLASSGFSISDNDLPELSGGVMCGSADTLSSSIFHQLSVSPINLHSPEGKPTPSGIEGQMILQKSPELKRKSC*