Gene Details:
- MSU gene ID: LOC_Os09g12150
- RAPdb gene ID: Os09g0292900
- Gene Symbol: IBF1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Real-time RT-PCR and GUS activity assays revealed that IBF1 specifically expressed in reproductive tissues.
- In the IBF1 mutant, brown pigments specifically accumulate in hull furrows during seed maturation and reach a maximum level in dry seeds.
Function-related keywords:
Literature:
- A novel gene IBF1 is required for the inhibition of brown pigment deposition in rice hull furrows . DOI: 10.1007/s00122-012-1840-8 ; PMID: 22419106
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os09g12150.1
GCGTGCGAGACGGCGTCGCGTCGCTCGCCACGACGGACATGCAGCACCTGCACGGCGACGTGCTCGAGTCGGCGGTGGAGCGCGTGCCGGCGCCCGATCTCGCCGCCGCGGCGCTGGTGTCACGGGAGTGGCTCCGCGCGGTGCGCGCCGCGCTGCGACGGCGCATGCTGCGGCTGCCGTGGCTCGTCGTCCACGTGATCCATCTCCGGGGCCAGCGGCGCCTCGCCGCGGCTTACGACCCGCGCTCCGGGGCGTGGCTCGCCGTGCCCACGGCGCCACCGGCGCGCCACGGCGCGACGTCGCCGCCGCAGCCGCACTCGCACGTCCGCCTGATGCGGGGCGCGAGCGGGGACCGCGTCTGCGCGCTCTCGCTCTCCGGGCTCGCCGTGGCGCGGGACGCTCTCGGGATGGACGACGACGCGCTCGTCGTCGCGCTCAAGGCCCCCGGCGTGTGGCGCGTCGATCCGGTGCTCGCCGCGGTGGGTGACCGCGTGGTCGCCATGGGCGGCGCGTGCCGGCTGGCGCTGGGTGACGGGGAGGACACCTCGGCCGTCGAGGTCCACGAGCGCGGCGGCTGGACGCACTGCGGCGCGGTGCCGACCGCGCTCCGGGAGTCCGCGGCGGCGGCAGCGACGTGGCTCTCGACGGCGGCGACGGATCAGAGAGTGTACGTCGCGGACAGAGCCACGGGGACGGCGAGCTGGTTCGACCCGGCGAAGCAGCAGTGGGGACCCACCTCCCGCCTCCGCCCTGACGCCACCGTCTCCACATGGGGCCTCGCCGCCGGCCGCGCCGGCGCCGAGAAGATCATCCTGTTCGGAGTGAAGCATGCAGACAGCCGAGTCGTCATCCGATCATGGGAGGTGGACGGCGACAGCCTCTCCCTGTCCCATGGCGCGGCGGCGGCGCACGACACGATGCCGAGCGAGATGTCCGAGAGGCTGTTCCCGCACGGCGACGACGGCGAGGAGGAGACGTCGTCGCCGTCGATCGGGGTGTGCGGCAACACCGCCGGTGGGTACGTGTACAATGCGGCCGTGCCGGCGACGGGCGCCGTCCTCTACGAGCTCCGGCGGGGCGGGGTGGAGGGCGGCGGCGTGGAGCGGTGGGCGTGGGTTGCGTGCGCGCCGGTGGTGGCCGAAGCGGAGGCGTTGGGACGCGTCATCCTCGCGTGTTCGCCGGTGGGGCTGCACGAGCTTGCGGACGAACGGCTTGCACACTGAACTAATAATGGCTATCGTGACATGTTGTCGATAGCCAGTTGAGCTTGTAATAAGCATATAGGGCTGTTACACTCTGAAAAATAAGTTTGGATACTCCCACCGGTTTTATAATAATTCTCGTTGTTTTGGACAATAATAACACGGCATATTCACTACATGACAA
CDS Sequence
- >LOC_Os09g12150.1
ATGCAGCACCTGCACGGCGACGTGCTCGAGTCGGCGGTGGAGCGCGTGCCGGCGCCCGATCTCGCCGCCGCGGCGCTGGTGTCACGGGAGTGGCTCCGCGCGGTGCGCGCCGCGCTGCGACGGCGCATGCTGCGGCTGCCGTGGCTCGTCGTCCACGTGATCCATCTCCGGGGCCAGCGGCGCCTCGCCGCGGCTTACGACCCGCGCTCCGGGGCGTGGCTCGCCGTGCCCACGGCGCCACCGGCGCGCCACGGCGCGACGTCGCCGCCGCAGCCGCACTCGCACGTCCGCCTGATGCGGGGCGCGAGCGGGGACCGCGTCTGCGCGCTCTCGCTCTCCGGGCTCGCCGTGGCGCGGGACGCTCTCGGGATGGACGACGACGCGCTCGTCGTCGCGCTCAAGGCCCCCGGCGTGTGGCGCGTCGATCCGGTGCTCGCCGCGGTGGGTGACCGCGTGGTCGCCATGGGCGGCGCGTGCCGGCTGGCGCTGGGTGACGGGGAGGACACCTCGGCCGTCGAGGTCCACGAGCGCGGCGGCTGGACGCACTGCGGCGCGGTGCCGACCGCGCTCCGGGAGTCCGCGGCGGCGGCAGCGACGTGGCTCTCGACGGCGGCGACGGATCAGAGAGTGTACGTCGCGGACAGAGCCACGGGGACGGCGAGCTGGTTCGACCCGGCGAAGCAGCAGTGGGGACCCACCTCCCGCCTCCGCCCTGACGCCACCGTCTCCACATGGGGCCTCGCCGCCGGCCGCGCCGGCGCCGAGAAGATCATCCTGTTCGGAGTGAAGCATGCAGACAGCCGAGTCGTCATCCGATCATGGGAGGTGGACGGCGACAGCCTCTCCCTGTCCCATGGCGCGGCGGCGGCGCACGACACGATGCCGAGCGAGATGTCCGAGAGGCTGTTCCCGCACGGCGACGACGGCGAGGAGGAGACGTCGTCGCCGTCGATCGGGGTGTGCGGCAACACCGCCGGTGGGTACGTGTACAATGCGGCCGTGCCGGCGACGGGCGCCGTCCTCTACGAGCTCCGGCGGGGCGGGGTGGAGGGCGGCGGCGTGGAGCGGTGGGCGTGGGTTGCGTGCGCGCCGGTGGTGGCCGAAGCGGAGGCGTTGGGACGCGTCATCCTCGCGTGTTCGCCGGTGGGGCTGCACGAGCTTGCGGACGAACGGCTTGCACACTGA
Protein Sequence
- >LOC_Os09g12150.1
MQHLHGDVLESAVERVPAPDLAAAALVSREWLRAVRAALRRRMLRLPWLVVHVIHLRGQRRLAAAYDPRSGAWLAVPTAPPARHGATSPPQPHSHVRLMRGASGDRVCALSLSGLAVARDALGMDDDALVVALKAPGVWRVDPVLAAVGDRVVAMGGACRLALGDGEDTSAVEVHERGGWTHCGAVPTALRESAAAAATWLSTAATDQRVYVADRATGTASWFDPAKQQWGPTSRLRPDATVSTWGLAAGRAGAEKIILFGVKHADSRVVIRSWEVDGDSLSLSHGAAAAHDTMPSEMSERLFPHGDDGEEETSSPSIGVCGNTAGGYVYNAAVPATGAVLYELRRGGVEGGGVERWAWVACAPVVAEAEALGRVILACSPVGLHELADERLAH*