Information report for Sub1B
Gene Details
|
|
Functional Descriptions
- Sequencing the Sub1 region in an FR13A-derived line revealed the presence of three genes encoding putative ethylene responsive factors (ERF), Sub1A, Sub1B and Sub1C and Sub1A were subsequently identified as the major determinant of submergence tolerance.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q6EN65
- EMBL: AK068688, AK106057, AP014965
- AlphaFoldDB: Q6EN65
- EnsemblPlants: Os09t0287000-01
- Gramene: Os09t0287000-01
- KEGG: osa:4346629
- Orthologous matrix: SKARVWI
- InterPro: IPR001471, IPR016177, IPR036955
- PANTHER: PTHR31190, PTHR31190:SF434
- SUPFAM: SSF54171
- PROSITE: PS51032
- Gene3D: 3.30.730.10
- OrthoDB: Q6EN65
- SWISS-MODEL: Q6EN65
- Conserved Domain Database: cd00018
- eggNOG: ENOG502QV26
Sequences
cDNA Sequence
- >LOC_Os09g11480.1
AGATATTCAGACACACACCTTCAATAACTTGCAAGGATAACTCAAACTACTTGAATCAGATCAGACAAAAACATCATAAGAATATCACGATGTGTGGAGGAGCACTGATCCCGAACGACTATGGCGACAAGCCGCCGCCGCCGCCGTCGGAGTCGTCGGAGTGGGACGCCACAACGAAGATGAAGAAGAAGAAGAAGCGTGGTGGCGGCGGCGACGACGACTGGGAGGCCGCCTTCCGGGAGTTCATCGCTGGCGACGACGACGACGACGACGGCGGCGTTTCCATGTTCCCTTCTGGTGCAGGGACGATGGAGACGACCACAGAGGTGGCGCCGGCGGCGGCGGTGGTGGAGAGGCCGCGGCGGCGGCGAAGGGTGAGGCGGAGCTACCCGTACCGCGGCGTCCGGCAGCGGCCGTGGGGGCGGTGGGCGTCGGAGATCCGCGACCCCGTCAAGGGCGCCCGCGTCTGGCTCGGCACCTTCGACACCGCCGTCGAGGCCGCGCGCGCCTACGACGCCGAGGCGCGCCGCATCCACGGCCACAAGGCAAGGACCAACTTCCCGCCCGACGAGCCTCCGCTGCCGGCGCCATCGCAGGCGCCGTTCTGCTTCCTGCTCGACGACGACGACGACGACGACGGCGTGGCCCGTGGAAACAGCCCGGCGTCGTCGTCGGCGCCGGACAGAGCCTCCGCTTGCACGACGTCGTCGACGGTGGCGTCCGGCGAGCGAGGCGATGAGCTCATACTGCTGGAGTGCTGCTCCGACGACGTGATGGACAGCCTCCTCGCCGGCTTCGACGTGTCCAGCGAACCACGCAGTGTTTTGGGAATGGTTAATTAGCAGCGCGCACGCCTGATTAGATCGGTACATGTGAAGTACAAGAGAAGTAGTTACTACTAGCTAGGAGCAAATTAACTTGGAGTGCAAGAATAAAATATGCATGTCTCTGCACTACTACTGTAGTGTTAGCAAGTTTGCTCATTGTTCTGTTGTATCCTTTCATGTCCATTTCAGACTTCCCAATGCTACATAAGGATGTACATATGTATGATGTTGTGTGCCTTGTTAATCAATGAATGTAAATATCTTTATATTGCTTTTGTACAACAAAAA - >LOC_Os09g11480.2
AGATATTCAGACACACACCTTCAATAACTTGCAAGGATAACTCAAACTACTTGAATCAGATCAGACAAAAACATCATAAGAATATCACGATGTGTGGAGGAGCACTGATCCCGAACGACTATGGCGACAAGCCGCCGCCGCCGCCGTCGGAGTCGTCGGAGTGGGACGCCACAACGAAGATGAAGAAGAAGAAGAAGCGTGGTGGCGGCGGCGACGACGACTGGGAGGCCGCCTTCCGGGAGTTCATCGCTGGCGACGACGACGACGACGACGGCGGCGTTTCCATGTTCCCTTCTGGTGCAGGGACGATGGAGACGACCACAGAGGTGGCGCCGGCGGCGGCGGTGGTGGAGAGGCCGCGGCGGCGGCGAAGGGTGAGGCGGAGCTACCCGTACCGCGGCGTCCGGCAGCGGCCGTGGGGGCGGTGGGCGTCGGAGATCCGCGACCCCGTCAAGGGCGCCCGCGTCTGGCTCGGCACCTTCGACACCGCCGTCGAGGCCGCGCGCGCCTACGACGCCGAGGCGCGCCGCATCCACGGCCACAAGGCAAGGACCAACTTCCCGCCCGACGAGCCTCCGCTGCCGGCGCCATCGCAGGCGCCGTTCTGCTTCCTGCTCGACGACGACGACGACGACGACGGCGTGGCCCGTGGAAACAGCCCGGCGTCGTCGTCGGCGCCGGACAGAGCCTCCGCTTGCACGACGTCGTCGACGGTGGCGTCCGGCGAGCGAGGCGATGAGCTCATACTGCTGGAGTGCTGCTCCGACGACGTGATGGACAGCCTCCTCGCCGGCTTCGACGTGTCCAGCGAACCACGCAGTGTTTTGGGAATGGTTAATTAGCAGCGCGCACGCCTGATTAGATCGGTACATGTGAAGTACAAGAGAAGTAGTTACTACTAGCTAGGAGCAAATTAACTTGGAGTGCAAGAATAAAATATGCATGTCTCTGCACTACTACTGTAGTGTTAGCAAGTTTGCTCATTGTTCTGTTGTATCCTTTCATGTCCATTTCAGACTTCCCAATGCTACATAAGGATGTACATATGTATGATGTTGTGTGCCTTGTTAATCAATGAATGTAAATATCTTTATATTGCTTTTGTACAACAAAAA
CDS Sequence
- >LOC_Os09g11480.1
ATGTGTGGAGGAGCACTGATCCCGAACGACTATGGCGACAAGCCGCCGCCGCCGCCGTCGGAGTCGTCGGAGTGGGACGCCACAACGAAGATGAAGAAGAAGAAGAAGCGTGGTGGCGGCGGCGACGACGACTGGGAGGCCGCCTTCCGGGAGTTCATCGCTGGCGACGACGACGACGACGACGGCGGCGTTTCCATGTTCCCTTCTGGTGCAGGGACGATGGAGACGACCACAGAGGTGGCGCCGGCGGCGGCGGTGGTGGAGAGGCCGCGGCGGCGGCGAAGGGTGAGGCGGAGCTACCCGTACCGCGGCGTCCGGCAGCGGCCGTGGGGGCGGTGGGCGTCGGAGATCCGCGACCCCGTCAAGGGCGCCCGCGTCTGGCTCGGCACCTTCGACACCGCCGTCGAGGCCGCGCGCGCCTACGACGCCGAGGCGCGCCGCATCCACGGCCACAAGGCAAGGACCAACTTCCCGCCCGACGAGCCTCCGCTGCCGGCGCCATCGCAGGCGCCGTTCTGCTTCCTGCTCGACGACGACGACGACGACGACGGCGTGGCCCGTGGAAACAGCCCGGCGTCGTCGTCGGCGCCGGACAGAGCCTCCGCTTGCACGACGTCGTCGACGGTGGCGTCCGGCGAGCGAGGCGATGAGCTCATACTGCTGGAGTGCTGCTCCGACGACGTGATGGACAGCCTCCTCGCCGGCTTCGACGTGTCCAGCGAACCACGCAGTGTTTTGGGAATGGTTAATTAG - >LOC_Os09g11480.2
ATGTGTGGAGGAGCACTGATCCCGAACGACTATGGCGACAAGCCGCCGCCGCCGCCGTCGGAGTCGTCGGAGTGGGACGCCACAACGAAGATGAAGAAGAAGAAGAAGCGTGGTGGCGGCGGCGACGACGACTGGGAGGCCGCCTTCCGGGAGTTCATCGCTGGCGACGACGACGACGACGACGGCGGCGTTTCCATGTTCCCTTCTGGTGCAGGGACGATGGAGACGACCACAGAGGTGGCGCCGGCGGCGGCGGTGGTGGAGAGGCCGCGGCGGCGGCGAAGGGTGAGGCGGAGCTACCCGTACCGCGGCGTCCGGCAGCGGCCGTGGGGGCGGTGGGCGTCGGAGATCCGCGACCCCGTCAAGGGCGCCCGCGTCTGGCTCGGCACCTTCGACACCGCCGTCGAGGCCGCGCGCGCCTACGACGCCGAGGCGCGCCGCATCCACGGCCACAAGGCAAGGACCAACTTCCCGCCCGACGAGCCTCCGCTGCCGGCGCCATCGCAGGCGCCGTTCTGCTTCCTGCTCGACGACGACGACGACGACGACGGCGTGGCCCGTGGAAACAGCCCGGCGTCGTCGTCGGCGCCGGACAGAGCCTCCGCTTGCACGACGTCGTCGACGGTGGCGTCCGGCGAGCGAGGCGATGAGCTCATACTGCTGGAGTGCTGCTCCGACGACGTGATGGACAGCCTCCTCGCCGGCTTCGACGTGTCCAGCGAACCACGCAGTGTTTTGGGAATGGTTAATTAG
Protein Sequence
- >LOC_Os09g11480.1
MCGGALIPNDYGDKPPPPPSESSEWDATTKMKKKKKRGGGGDDDWEAAFREFIAGDDDDDDGGVSMFPSGAGTMETTTEVAPAAAVVERPRRRRRVRRSYPYRGVRQRPWGRWASEIRDPVKGARVWLGTFDTAVEAARAYDAEARRIHGHKARTNFPPDEPPLPAPSQAPFCFLLDDDDDDDGVARGNSPASSSAPDRASACTTSSTVASGERGDELILLECCSDDVMDSLLAGFDVSSEPRSVLGMVN* - >LOC_Os09g11480.2
MCGGALIPNDYGDKPPPPPSESSEWDATTKMKKKKKRGGGGDDDWEAAFREFIAGDDDDDDGGVSMFPSGAGTMETTTEVAPAAAVVERPRRRRRVRRSYPYRGVRQRPWGRWASEIRDPVKGARVWLGTFDTAVEAARAYDAEARRIHGHKARTNFPPDEPPLPAPSQAPFCFLLDDDDDDDGVARGNSPASSSAPDRASACTTSSTVASGERGDELILLECCSDDVMDSLLAGFDVSSEPRSVLGMVN*