Gene Details:

Functional Descriptions:

  • Here, we observed that suppression of Oryza sativa Trithorax1 (OsTrx1), an ortholog of ATX1, delayed flowering time in rice (Oryza sativa).
  • Our results suggest that OsTrx1 plays an important role in regulating flowering time in rice by modulating chromatin structure.
  • However, the Grain number, plant height, and heading date7 (Ghd7) pathway was altered in OsTrx1.
  • OsHUB2 inhibits function of OsTrx1 in heading date in rice.
  • Together, our results (i) reveal that OsHUB2 represses the function of OsTrx1 and H3K4me3 levels at Ehd1 and (ii) suggest that OsHUB2-mediated H2B ubiquitination plays critical roles together with H3K4me3 in rice heading date regulation.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os09g04890.1
    AAAAGGAAATCGGGAAATCAATCCCCATCGTCCCCCAAGCCTCCGGGGGCCGACCGGAGTGAGGAGGGGGGCGAGGGGCGTCCTCCGGCGGGAAACGGCAAAAAATTTTCGCGAGGGCCTCAGGGCCCCCAAAACTTCCCTCCCCCGGAACCCCAAATCCCTAAACCCCTCCAGTGGCGAAGCCCTAGAGCCGAAACCCTAGCCAGCCCAGCCATGGTGATCGCGGTGGAGGGGGGCTTCGTGCACGAGGAGGAGGAGGTGGACCACCCAATTCGCTACCTCCCACTTGGCCGCGTCTACTCCTCCTCTGCTCCGTGCCCTCTCCCCAAGAAGCCCCGCTCCGCCGAGGACGGCAAGCCCCCCGTGATCGTCTACTACCGCCGCCGCCGTAAGAAGCCGCGGGTCGAGGGGCCACCTCCCTCGCCTGCCACAGCACCACCGATGCTGCACCCCCGGGAGGACGACGAGGATGAGGAGGTTACACGGCGGAAGGGTTCTCTCAAGTACGAGCTGCTGAGCCTGGGGCAAGCCCCGCCCGCATTAGGCGGGGATGGGGAGGAGCCCGCGCGGCGGCGCTGCCTGAGGCGTAGCGGAGGGGCTGAGAGGAGGGGTTACTTCTCTGAACCCAAGAGGCGGCAGCGGCAGGGCGTGCACAAGGAAGCTGCCTCCTCGGCTGGGAGGAGATGGTTGGAGTTGGAAATTGAGGCTGCGGATCCACTGGCCTTTGTGGGATTAGGATGCAAGGTTTTCTGGCCCCTCGATGAGGATTGGTACAAGGGTTCTATCACAGGGTACAATGAAGCGACTAAGAAACATTCCGTAAAGTATGATGATGGCGAATCAGAGGACCTTAACCTAGCTGATGAAAGGATAAAATTTTCTATTTCATCTGAAGAAATGAAGTGCAGGAACTTGAAATTTGGAATTTCCAATCTGAACAAGAGGGGCTATGATGAGTTGCTTGCCCTTGCTGTTAGCCTTCATGATTACCAAGGTCTTGATCCAGGTGATCTTGTGTGGGCTAAACTTACAGGTCATGCCATGTGGCCAGCTGTTGTGGTGGATGAATCAAATGTTCCTGCTAACAGGGCTTTGAAGCCAGGCCGACTAGATCAGTCGATACTTGTTCAATTCTTTGGTACTCATGATTTTGCCAGGATTAAGTTGAAGCAAGCGGTGCCCTTTCTGAATGGCCTTCTTTCTTCTTTGCATCTTAAATGCAAGCAAGCACGCTTCTATCGGAGTTTAGAAGAAGCCAAGGAGTTTCTCTGCACACAGCTTCTCCCAGAAAATATGTTGCAACTACAGAAATCCATGGAAAAGGGCAGTTCTGATGCTAATTCCAATAAAGATGTACATTCTTGTGACAATTTATCTGAAGATAAAACAGCTGAAAGCGGAGGGGATTATGATGAGATGACTCCAATAGAACTAGGAAATCTTCGTGTGAGCAAATTAGGTAGGATAGTAACTGACTCAGACTATTTCCATAACAAAAAGCATATATGGCCTGAAGGGTATACTGCTTTCAGGAAGTTCAGATCAGTGAAAGATCCACATGTAGTAATACTTTACAAAATGGAGGTACTGAGGAATTCAGATATAAAAGCTCGGCCATTGTTTAGGGTCACATCAGAAGATGGAACACAGATTGATGGCTCTACCCCAAATACATGTTGGAAGGAGATATATTGTAGATTAAAGGAAAAACAGCGCAATGTGGCCTCTGGATTGGACAGAGATGTTTGTCAGGGATCTGGTTCCTATATGTTTGGCTTTTCAAATCCACAAATACGGCAACTTATTCAGGAGTTACCCAATGCAAGGTCATGCTTAAAGTATTTTGAAAATGCTGGAGACACCTTTCGTGGGTATAGAGCTGTTCATGTAAATTGGAAAGATCTAGACTATTGTAGTGTTTGTGATATGGATGAGGAATACGAAGACAATTTGTTCTTGCAATGTGATAAGTGCCGTATGATGGTACATGCTAGATGCTATGGTGAACTCGAACCATTGAATGGAGTCCTTTGGCTTTGCAACCTGTGTCGACCTGAGGCGCCTCGTGTTTCTCCACGATGCTGTCTTTGTCCAGTAACAGGGGGCGCAATGAAACCAACAACAGATGGTCGTTGGGCTCATCTTGCATGTGCTATATGGATTCCTGAAACTTGCTTAAAAGATGTGAAGAGAATGGAACCGATTGATGGATTGAGCAGAATCAACAAGGACCGCTGGAAACTTCTATGCAGCATTTGCGGAGTTGCTTATGGAGCTTGCATACAGTGTTCTCATCCTACCTGTCGTGTTGCATATCACCCTCTTTGTGCACGTGCTGCTGATCTTTGTGTTGAGCTTGAAGATGATGACAAAATCCACCTCATGTTACTTGATGAGGATGAGGACCCATGTATTCGTCTACTTTCATACTGCAAGAAGCACAGACAACCATCGACTGAACGTCCATCTCTTGAAAGTAACCTTGCTAAGCCTGCTGTGGTAGTTCAGACAGATGCAGTTCCACCATCCGGTTGTGCAAGGACTGAACCTTATAATATCCATGGGAGAAGGGGCCAAAAGCAACCTCAAGTTATGGCTACCGCTTCTGTAAAACGTTTATATGTAGAGAATATGCCTTATATTGTTAGTGGTTTCTGCCAAAATAGAGTAGGCCATGATGCTATCAGTGAACCAATTCAATCAGTTGGCTTTTTGGATGTTGCACATCAAGAAGCTGTTGGCAACGTGTCTTCTATGATTGAAAAGTATAAAAGCATGAAGGCTACATTCAGGAGGAGACTAGCTTTTGGAAAGTCAAGAATTCATGGATTTGGTGTCTTTGCAAAGGTTTCGCACAAGGCAGGCGACATGATGATTGAGTACATCGGAGAGCTCGTCAGGCCACCAATATCAGACATTAGAGAGCGGCGCATATACAACTCTTTAGTGGGTGCTGGGACGTACATGTTCAGGATAGATGATGAGCGTGTTATAGATGCTACGCGGGCAGGAAGCATTGCCCATTTAATTAATCATTCTTGTGAGCCGAATTGTTATTCACGCGTCATAAGTGTTCTCGGGGATGAGCATATCATCATTTTTGCAAAGCGGGATATAAATCCATGGGAAGAGTTGACTTATGATTATAGGTTTGTTTCGAGTGATCAGCGACTTCCTTGTTATTGTGGATTCCCAAAATGCCGTGGAGTTGTTAACGATGTTGAAGCAGAGGGGCAATCAGCCAAAATAAGGGTCAATAGAAGTGAATTATTTCAACAATGATCAGACTGAGGGATCGTATTTAGAATTGCCCCAGGGTACTGGATTGCGAACTGTGCTCCTTCGGGGCTAGTGGCAAAATTGCAAAAATTTGCCTCAGTTTTTCATGTGAGAAATGCTAATTATTCTTTGCTCACATTTACACAAGAATGCCATCGTAATTGTACATCTATTCTGACATAGGTCTGGCATTCCATTTGTTATTGGTACCATAATTGGAACTTACTTTGTGGTGGCATAATCAAAATATTCAGATCTTCTCATGTAATTTGTCCATTTGTCATCAGTTATATGTTGGCCCTATCAACCAAATGAGTCGAAA
CDS Sequence
  • >LOC_Os09g04890.1
    ATGGTGATCGCGGTGGAGGGGGGCTTCGTGCACGAGGAGGAGGAGGTGGACCACCCAATTCGCTACCTCCCACTTGGCCGCGTCTACTCCTCCTCTGCTCCGTGCCCTCTCCCCAAGAAGCCCCGCTCCGCCGAGGACGGCAAGCCCCCCGTGATCGTCTACTACCGCCGCCGCCGTAAGAAGCCGCGGGTCGAGGGGCCACCTCCCTCGCCTGCCACAGCACCACCGATGCTGCACCCCCGGGAGGACGACGAGGATGAGGAGGTTACACGGCGGAAGGGTTCTCTCAAGTACGAGCTGCTGAGCCTGGGGCAAGCCCCGCCCGCATTAGGCGGGGATGGGGAGGAGCCCGCGCGGCGGCGCTGCCTGAGGCGTAGCGGAGGGGCTGAGAGGAGGGGTTACTTCTCTGAACCCAAGAGGCGGCAGCGGCAGGGCGTGCACAAGGAAGCTGCCTCCTCGGCTGGGAGGAGATGGTTGGAGTTGGAAATTGAGGCTGCGGATCCACTGGCCTTTGTGGGATTAGGATGCAAGGTTTTCTGGCCCCTCGATGAGGATTGGTACAAGGGTTCTATCACAGGGTACAATGAAGCGACTAAGAAACATTCCGTAAAGTATGATGATGGCGAATCAGAGGACCTTAACCTAGCTGATGAAAGGATAAAATTTTCTATTTCATCTGAAGAAATGAAGTGCAGGAACTTGAAATTTGGAATTTCCAATCTGAACAAGAGGGGCTATGATGAGTTGCTTGCCCTTGCTGTTAGCCTTCATGATTACCAAGGTCTTGATCCAGGTGATCTTGTGTGGGCTAAACTTACAGGTCATGCCATGTGGCCAGCTGTTGTGGTGGATGAATCAAATGTTCCTGCTAACAGGGCTTTGAAGCCAGGCCGACTAGATCAGTCGATACTTGTTCAATTCTTTGGTACTCATGATTTTGCCAGGATTAAGTTGAAGCAAGCGGTGCCCTTTCTGAATGGCCTTCTTTCTTCTTTGCATCTTAAATGCAAGCAAGCACGCTTCTATCGGAGTTTAGAAGAAGCCAAGGAGTTTCTCTGCACACAGCTTCTCCCAGAAAATATGTTGCAACTACAGAAATCCATGGAAAAGGGCAGTTCTGATGCTAATTCCAATAAAGATGTACATTCTTGTGACAATTTATCTGAAGATAAAACAGCTGAAAGCGGAGGGGATTATGATGAGATGACTCCAATAGAACTAGGAAATCTTCGTGTGAGCAAATTAGGTAGGATAGTAACTGACTCAGACTATTTCCATAACAAAAAGCATATATGGCCTGAAGGGTATACTGCTTTCAGGAAGTTCAGATCAGTGAAAGATCCACATGTAGTAATACTTTACAAAATGGAGGTACTGAGGAATTCAGATATAAAAGCTCGGCCATTGTTTAGGGTCACATCAGAAGATGGAACACAGATTGATGGCTCTACCCCAAATACATGTTGGAAGGAGATATATTGTAGATTAAAGGAAAAACAGCGCAATGTGGCCTCTGGATTGGACAGAGATGTTTGTCAGGGATCTGGTTCCTATATGTTTGGCTTTTCAAATCCACAAATACGGCAACTTATTCAGGAGTTACCCAATGCAAGGTCATGCTTAAAGTATTTTGAAAATGCTGGAGACACCTTTCGTGGGTATAGAGCTGTTCATGTAAATTGGAAAGATCTAGACTATTGTAGTGTTTGTGATATGGATGAGGAATACGAAGACAATTTGTTCTTGCAATGTGATAAGTGCCGTATGATGGTACATGCTAGATGCTATGGTGAACTCGAACCATTGAATGGAGTCCTTTGGCTTTGCAACCTGTGTCGACCTGAGGCGCCTCGTGTTTCTCCACGATGCTGTCTTTGTCCAGTAACAGGGGGCGCAATGAAACCAACAACAGATGGTCGTTGGGCTCATCTTGCATGTGCTATATGGATTCCTGAAACTTGCTTAAAAGATGTGAAGAGAATGGAACCGATTGATGGATTGAGCAGAATCAACAAGGACCGCTGGAAACTTCTATGCAGCATTTGCGGAGTTGCTTATGGAGCTTGCATACAGTGTTCTCATCCTACCTGTCGTGTTGCATATCACCCTCTTTGTGCACGTGCTGCTGATCTTTGTGTTGAGCTTGAAGATGATGACAAAATCCACCTCATGTTACTTGATGAGGATGAGGACCCATGTATTCGTCTACTTTCATACTGCAAGAAGCACAGACAACCATCGACTGAACGTCCATCTCTTGAAAGTAACCTTGCTAAGCCTGCTGTGGTAGTTCAGACAGATGCAGTTCCACCATCCGGTTGTGCAAGGACTGAACCTTATAATATCCATGGGAGAAGGGGCCAAAAGCAACCTCAAGTTATGGCTACCGCTTCTGTAAAACGTTTATATGTAGAGAATATGCCTTATATTGTTAGTGGTTTCTGCCAAAATAGAGTAGGCCATGATGCTATCAGTGAACCAATTCAATCAGTTGGCTTTTTGGATGTTGCACATCAAGAAGCTGTTGGCAACGTGTCTTCTATGATTGAAAAGTATAAAAGCATGAAGGCTACATTCAGGAGGAGACTAGCTTTTGGAAAGTCAAGAATTCATGGATTTGGTGTCTTTGCAAAGGTTTCGCACAAGGCAGGCGACATGATGATTGAGTACATCGGAGAGCTCGTCAGGCCACCAATATCAGACATTAGAGAGCGGCGCATATACAACTCTTTAGTGGGTGCTGGGACGTACATGTTCAGGATAGATGATGAGCGTGTTATAGATGCTACGCGGGCAGGAAGCATTGCCCATTTAATTAATCATTCTTGTGAGCCGAATTGTTATTCACGCGTCATAAGTGTTCTCGGGGATGAGCATATCATCATTTTTGCAAAGCGGGATATAAATCCATGGGAAGAGTTGACTTATGATTATAGGTTTGTTTCGAGTGATCAGCGACTTCCTTGTTATTGTGGATTCCCAAAATGCCGTGGAGTTGTTAACGATGTTGAAGCAGAGGGGCAATCAGCCAAAATAAGGGTCAATAGAAGTGAATTATTTCAACAATGA
Protein Sequence
  • >LOC_Os09g04890.1
    MVIAVEGGFVHEEEEVDHPIRYLPLGRVYSSSAPCPLPKKPRSAEDGKPPVIVYYRRRRKKPRVEGPPPSPATAPPMLHPREDDEDEEVTRRKGSLKYELLSLGQAPPALGGDGEEPARRRCLRRSGGAERRGYFSEPKRRQRQGVHKEAASSAGRRWLELEIEAADPLAFVGLGCKVFWPLDEDWYKGSITGYNEATKKHSVKYDDGESEDLNLADERIKFSISSEEMKCRNLKFGISNLNKRGYDELLALAVSLHDYQGLDPGDLVWAKLTGHAMWPAVVVDESNVPANRALKPGRLDQSILVQFFGTHDFARIKLKQAVPFLNGLLSSLHLKCKQARFYRSLEEAKEFLCTQLLPENMLQLQKSMEKGSSDANSNKDVHSCDNLSEDKTAESGGDYDEMTPIELGNLRVSKLGRIVTDSDYFHNKKHIWPEGYTAFRKFRSVKDPHVVILYKMEVLRNSDIKARPLFRVTSEDGTQIDGSTPNTCWKEIYCRLKEKQRNVASGLDRDVCQGSGSYMFGFSNPQIRQLIQELPNARSCLKYFENAGDTFRGYRAVHVNWKDLDYCSVCDMDEEYEDNLFLQCDKCRMMVHARCYGELEPLNGVLWLCNLCRPEAPRVSPRCCLCPVTGGAMKPTTDGRWAHLACAIWIPETCLKDVKRMEPIDGLSRINKDRWKLLCSICGVAYGACIQCSHPTCRVAYHPLCARAADLCVELEDDDKIHLMLLDEDEDPCIRLLSYCKKHRQPSTERPSLESNLAKPAVVVQTDAVPPSGCARTEPYNIHGRRGQKQPQVMATASVKRLYVENMPYIVSGFCQNRVGHDAISEPIQSVGFLDVAHQEAVGNVSSMIEKYKSMKATFRRRLAFGKSRIHGFGVFAKVSHKAGDMMIEYIGELVRPPISDIRERRIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCEPNCYSRVISVLGDEHIIIFAKRDINPWEELTYDYRFVSSDQRLPCYCGFPKCRGVVNDVEAEGQSAKIRVNRSELFQQ*