Gene Details:
- MSU gene ID: LOC_Os08g45030
- RAPdb gene ID: Os08g0564300
- Gene Symbol: SD8
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Genome-edited SD8 could optimize rice architecture by reducing plant height and flag leaf angle without yield penalty.
- Genome-edited ATP BINDING CASSETTE B1 transporter SD8 knockouts have optimized rice architecture without yield penalty.
- Moreover, SD8 knockouts may even have the potential for increased yield under high density planting in rice.
Function-related keywords:
- leaf , yield , architecture , transporter , height , plant-height , leaf-angle
Literature:
- Genome-edited ATP BINDING CASSETTE B1 transporter SD8 knockouts show optimized rice architecture without yield penalty . DOI: 10.1016/j.xplc.2022.100347 ; PMID: 35690904
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os08g45030.1
GTCGTCCCCTCTTACCACCAGCCATAAGCCATTAGGCAAGGCAATCCTCCTCCTCCTCCTTGCTCACAGTCACAGATGGGAAGAGAGGAATTGAGCAACTCGTCAACTCAAGAATTGGAGGGTTGAGCTAGAATTATTAGGAAGTAGAGCTAGAATTAGAGAAGAGCAGAGCAGCAAGAGATTATTAGTACAGGAACAGGAGAGCAGAGCAGAGTGCGATCGAGCAAGGGCAGGGCGGCGGTAGGCTAGGCATGGAGGAGGAGATAAAGGGCCGCGTCGTCGTCCTCGGCGCCGATGCCGCCGCCGACCCGGAGCTCGAGGCCTTCCATCTCCCCTCCGCCGACCAGCCCCCGCACTCGCACCTCCTCCACCACCACCATTCTCCACAATCCCATCCTCAACCTGATGCACCAGCAGCAGCAGCGCCACCGCCACCTGCTCCCCTTACTCCTCCTCCTCCTAAGTCGCCGCCGCCGCCTCCCCACATCCAAACCACCGACCTTCCACCGCCCAAGCCCCTCCCGCCGGCCCCGCTCCGTCAACTCTTCAGCTTCGCCGACGGCCTCGACTACGTCCTCATGACCCTGGGCACGCTGGGCGCCCTCGTCCACGGCTGCTCCCTCCCGGTCTTCCTCCGCTTCTTCGCCGACCTCGTCGACTCCTTCGGCTCCCACGCCGCCCACCCGGACACCATGCTCCGCCTCGTCGTCAAGTACGCCTTCTACTTCCTCGTCGTCGGCGCCGCCATCTGGGCCTCCTCCTGGGCCGAGATCTCCTGCTGGATGTGGACCGGCGAGCGGCAGTCCACCCGGATGCGCATCCGCTACCTCCACGCCGCCCTCCACCAGGACGTCTCCTTCTTCGACACCGACGTCCGCACCTCCGACGTCATCCACGCCATCAACGCCGACGCTGTCGTCGTCCAGGACGCCATCAGCGAGAAGCTCGGCAACCTCATCCACTACCTCGCCACCTTCGTCTCCGGCTTCGTCGTCGGATTCACCGCCGCCTGGCAGCTCGCCCTCGTCACCCTCGCCGTCGTCCCGCTCATCGCCGTCATCGGCGGCCTCAGCGCCGCCGCGCTCGCCAAGCTCTCCTCCAGGAGCCAGGACGCGCTGTCCGACGCCAGCGGCATCGCGGAGCAGGCGCTGGCGCAGATACGCATCGTGCAGTCGTTCGTGGGCGAGGAGCGGGTGATGCGGGCCTACTCGGCGGCGCTGGCCGTGGCGCAGCGGATCGGCTACCGCTCCGGCTTCGCCAAGGGCATCGGACTGGGCGGCACCTACTTCACCGTCTTCTGCTGCTACGCGCTGCTCCTCTGGTACGGGGGTCACCTCGTCCGACGCGCCCACACCAACGGAGGCCTCGCCATCGCCACCATGTTCTCAGTAATGATAGGCGGCCTGGCTCTTGGGCAGTCGGCTCCGAGCATGGCGGCGTTCGCCAAGGCGCGGGTGGCGGCGGCGAAGATATTCCGGATGATGGAGCACAAGCCGAGCATGGAGCGGGAGGGCGGGGTGGAGCTGGAGGCGGTGACGGGGCGGGTGGAGCTGCGGGATGTGGAGTTCTCGTACCCGTCGCGGCCAGACGTGGGGATCCTGCGGGGGTTGTCGCTGAGCGTGCCGGCGGGGAAGACGATCGCGCTGGTGGGGAGCTCCGGGTCAGGGAAGAGCACGGTGGTGTCGCTGATCGAGAGGTTCTACGAGCCCAACGCCGGGACCATCCTGCTGGACGGCCACGACCTGAGGGACCTCAACCTGCGGTGGCTGCGCCGCCAGATTGGTCTGGTGAGCCAGGAGCCGGCGCTGTTCGCCACCACCATCCGGGAGAACCTGCTGCTGGGGAGGGACGGCGCCACGCAGGAGGAGTTGGAGGAGGCCGCCAGGGTCGCCAACGCCCACTCCTTCATCGTCAAGCTCCCCGACGCCTACAACACGCAGGTTGGGGAGCGCGGGCTGCAGTTGTCGGGCGGGCAGAAGCAGCGGATCGCCATCGCGCGCGCCATGCTCCGGAACCCGGCCATCCTGCTGCTGGACGAGGCCACCAGCGCGCTGGACTCGGAGTCGGAGAAGCTGGTGCAGGAGGCGCTGGACCGCTTCATGATCGGGCGCACCACGCTGGTGATCGCGCACCGCCTCTCCACCATCCGCAAGGCCGACCTCGTGGCCGTCCTCCAGGGCGGGGCCATCTCCGAGGTGGGCACGCACGACGAGCTCATGGCCCGCGGGGATGGCACCTACGCCAGGCTCATCCGAATGCAGGAGCAGGCGCACGAGGCCGCGCTCGTCGCCGCTCGCCGGAGCAGCGCGCGACCATCCAGCGCCCGCAACTCCGTCAGCTCGCCCATCATCACGCGTAACTCCTCCTACGGCCGTTCCCCCTACTCCCGCCGCCTCTCCGACGCCGACTTCATCACCGGCCTCGGCCTCGGAGTCGACAGCAAGCAGCAGCAGCAGCAGCACTACTTCCGCGTGCAGGCCAGCTCCTTCTGGCGGCTGGCCAAGATGAACTCGCCCGAGTGGGGGTACGCGCTCGTCGCGTCGCTGGGCTCCATGGTGTGCGGCTCCTTCAGCGCCATCTTCGCCTACGTCCTCAGCGCCGTGCTCAGCGTGTACTACGCCCCCGACGCCGCCTACATGGACCGCCAGATCGCCAAGTACTGCTACCTCCTCATCGGCATGTCCTCCGCCGCCCTGCTCTTCAACACTGTCCAGCACCTCTTCTGGGACACCGTCGGCGAGAACCTCACCAAGCGCGTCCGCGAGAGGATGCTCGCCGCCGTGCTCCGCAACGAGATCGCCTGGTTCGACATGGAGGACAACTCCAGCGCCCGCATCGCCGCCAGGCTGGCGCTGGACGCCCAGAACGTGCGCTCCGCCATCGGCGACCGCATCTCCATCATCGTCCAGAACTCGGCGCTCATGCTGGTGGCCTGCACCGCCGGCTTCGTCCTGCAGTGGCGCCTCGCGCTGGTGCTGCTGGCCGTCTTCCCGCTGGTGGTGGCCGCCACCGTTCTGCAGAAGATGTTCCTCAAGGGGTTCTCGGGCGACCTGGAGCGGGCGCACGCGAGGGCGACGCAGATCGCGGGAGAGGCGGTGGCGAACGTGCGCACCGTGGCGGCGTTCGGGTCGGAGGCGAAGATCGTGGGGCTGTTCGAGGCGAACCTGGCGGGGCCGCTCCGGCGGTGCTTCTGGAAGGGGCAGATCGCCGGGAGCGGGTACGGGGTGGCGCAGTTCCTGCTGTACGCGTCGTACGCGCTGGGGCTGTGGTACGCGGCGTGGCTGGTGAAGCACGGCGTGTCGGACTTCTCCAAGACCATCCGGGTGTTCATGGTGCTGATGGTGTCGGCCAACGGCGCCGCGGAGACGCTGACGCTGGCGCCGGACTTCGTGAAGGGCGGGCGGGCGATGCAGGCGGTGTTCGAGGCGATGGACCGGAGGACAGAGATCGAGCCGGACGACGTGGACGCGGCGGCGGTGCCGGAGCGGCCCCGGGGGGAGGTTGAGCTGAAGCACGTGGACTTCGCGTACCCGTCGCGGCCGGAGGTGCAGGTGTTCCGGGACCTGAGCCTGAGGGCGCGGGCGGGGCGGACGCTGGCGCTGGTGGGGGCGAGCGGGTGCGGCAAGAGCTCGGTGCTGGCGCTGGTGCAGCGCTTCTACGAGCCCAACTCCGGGCGGGTGCTCCTGGACGGCCGGGACCTGCGCAAGTTCAACCTGCGGTCCCTGCGTCGCGCCATGGCGCTGGTGCCGCAGGAGCCCTTCCTTTTCGCGGCCACCATCCACGACAACATCGCGTACGGGCGCGAGGGGGCGACGGAGGCGGAGGTGGTGGAGGCGGCGACGGCGGCCAACGCGCACAAGTTCATATCGGCGCTGCCGGAGGGGTACGGGACGTTGGTCGGGGAGCGCGGGGTGCAGCTGTCGGGCGGGCAGCGCCAGCGGATCGCCATCGCGCGGGCGCTGGTGAAGCAGGCGCCCATCCTGCTGCTGGACGAGGCCACCAGCGCGCTGGACGCCGAGTCGGAGCGGAGCGTGCAGGAGGCGCTCGCCTCCTCCTCTGGCTCCGGCCGCACCACCATCGTGGTGGCCCACCGTCTGGCCACCGTCCGCAACGCCCACACCATCGCCGTCATCGACGACGGCAAGGTGGCGGAGCAGGGCTCGCACTCCCACCTGCTCAACCACCACCCCGATGGCTGCTACGCGCGCATGCTGCAGCTCCAGCGCCTCTCCCACTCCCACGTTGCGCCGGGCCCCTCCTCCTCAACAACAACACACGGCACCTAGTATTCGTTTTGATACAACAACATGTTCTTCTTTTGCTGTGTGTTCTTGCTGCTGCTGCTGCTAGATGTTCTAAGAATGAATTAATGAAATGAATTACTATACTGCTAGCTAGCTAGCTCATGATACTACTAGTACTGTGTCCATCGATGGATCATTTTAGCTCGATTCTTCGATTAGTTTGTCCGGAAATCAAGGACCAGCACAAAAGCAGCATGCTCAGTTCGATTAGTTGAGGATGATTGATACACCACCACTGCTGCTGCTGCTGCTGCTGGAGTAGTATAATATTACTCCATTACCAAGTCAATTCGATCAGCAGGTATGACCCGGGA
CDS Sequence
- >LOC_Os08g45030.1
ATGGAGGAGGAGATAAAGGGCCGCGTCGTCGTCCTCGGCGCCGATGCCGCCGCCGACCCGGAGCTCGAGGCCTTCCATCTCCCCTCCGCCGACCAGCCCCCGCACTCGCACCTCCTCCACCACCACCATTCTCCACAATCCCATCCTCAACCTGATGCACCAGCAGCAGCAGCGCCACCGCCACCTGCTCCCCTTACTCCTCCTCCTCCTAAGTCGCCGCCGCCGCCTCCCCACATCCAAACCACCGACCTTCCACCGCCCAAGCCCCTCCCGCCGGCCCCGCTCCGTCAACTCTTCAGCTTCGCCGACGGCCTCGACTACGTCCTCATGACCCTGGGCACGCTGGGCGCCCTCGTCCACGGCTGCTCCCTCCCGGTCTTCCTCCGCTTCTTCGCCGACCTCGTCGACTCCTTCGGCTCCCACGCCGCCCACCCGGACACCATGCTCCGCCTCGTCGTCAAGTACGCCTTCTACTTCCTCGTCGTCGGCGCCGCCATCTGGGCCTCCTCCTGGGCCGAGATCTCCTGCTGGATGTGGACCGGCGAGCGGCAGTCCACCCGGATGCGCATCCGCTACCTCCACGCCGCCCTCCACCAGGACGTCTCCTTCTTCGACACCGACGTCCGCACCTCCGACGTCATCCACGCCATCAACGCCGACGCTGTCGTCGTCCAGGACGCCATCAGCGAGAAGCTCGGCAACCTCATCCACTACCTCGCCACCTTCGTCTCCGGCTTCGTCGTCGGATTCACCGCCGCCTGGCAGCTCGCCCTCGTCACCCTCGCCGTCGTCCCGCTCATCGCCGTCATCGGCGGCCTCAGCGCCGCCGCGCTCGCCAAGCTCTCCTCCAGGAGCCAGGACGCGCTGTCCGACGCCAGCGGCATCGCGGAGCAGGCGCTGGCGCAGATACGCATCGTGCAGTCGTTCGTGGGCGAGGAGCGGGTGATGCGGGCCTACTCGGCGGCGCTGGCCGTGGCGCAGCGGATCGGCTACCGCTCCGGCTTCGCCAAGGGCATCGGACTGGGCGGCACCTACTTCACCGTCTTCTGCTGCTACGCGCTGCTCCTCTGGTACGGGGGTCACCTCGTCCGACGCGCCCACACCAACGGAGGCCTCGCCATCGCCACCATGTTCTCAGTAATGATAGGCGGCCTGGCTCTTGGGCAGTCGGCTCCGAGCATGGCGGCGTTCGCCAAGGCGCGGGTGGCGGCGGCGAAGATATTCCGGATGATGGAGCACAAGCCGAGCATGGAGCGGGAGGGCGGGGTGGAGCTGGAGGCGGTGACGGGGCGGGTGGAGCTGCGGGATGTGGAGTTCTCGTACCCGTCGCGGCCAGACGTGGGGATCCTGCGGGGGTTGTCGCTGAGCGTGCCGGCGGGGAAGACGATCGCGCTGGTGGGGAGCTCCGGGTCAGGGAAGAGCACGGTGGTGTCGCTGATCGAGAGGTTCTACGAGCCCAACGCCGGGACCATCCTGCTGGACGGCCACGACCTGAGGGACCTCAACCTGCGGTGGCTGCGCCGCCAGATTGGTCTGGTGAGCCAGGAGCCGGCGCTGTTCGCCACCACCATCCGGGAGAACCTGCTGCTGGGGAGGGACGGCGCCACGCAGGAGGAGTTGGAGGAGGCCGCCAGGGTCGCCAACGCCCACTCCTTCATCGTCAAGCTCCCCGACGCCTACAACACGCAGGTTGGGGAGCGCGGGCTGCAGTTGTCGGGCGGGCAGAAGCAGCGGATCGCCATCGCGCGCGCCATGCTCCGGAACCCGGCCATCCTGCTGCTGGACGAGGCCACCAGCGCGCTGGACTCGGAGTCGGAGAAGCTGGTGCAGGAGGCGCTGGACCGCTTCATGATCGGGCGCACCACGCTGGTGATCGCGCACCGCCTCTCCACCATCCGCAAGGCCGACCTCGTGGCCGTCCTCCAGGGCGGGGCCATCTCCGAGGTGGGCACGCACGACGAGCTCATGGCCCGCGGGGATGGCACCTACGCCAGGCTCATCCGAATGCAGGAGCAGGCGCACGAGGCCGCGCTCGTCGCCGCTCGCCGGAGCAGCGCGCGACCATCCAGCGCCCGCAACTCCGTCAGCTCGCCCATCATCACGCGTAACTCCTCCTACGGCCGTTCCCCCTACTCCCGCCGCCTCTCCGACGCCGACTTCATCACCGGCCTCGGCCTCGGAGTCGACAGCAAGCAGCAGCAGCAGCAGCACTACTTCCGCGTGCAGGCCAGCTCCTTCTGGCGGCTGGCCAAGATGAACTCGCCCGAGTGGGGGTACGCGCTCGTCGCGTCGCTGGGCTCCATGGTGTGCGGCTCCTTCAGCGCCATCTTCGCCTACGTCCTCAGCGCCGTGCTCAGCGTGTACTACGCCCCCGACGCCGCCTACATGGACCGCCAGATCGCCAAGTACTGCTACCTCCTCATCGGCATGTCCTCCGCCGCCCTGCTCTTCAACACTGTCCAGCACCTCTTCTGGGACACCGTCGGCGAGAACCTCACCAAGCGCGTCCGCGAGAGGATGCTCGCCGCCGTGCTCCGCAACGAGATCGCCTGGTTCGACATGGAGGACAACTCCAGCGCCCGCATCGCCGCCAGGCTGGCGCTGGACGCCCAGAACGTGCGCTCCGCCATCGGCGACCGCATCTCCATCATCGTCCAGAACTCGGCGCTCATGCTGGTGGCCTGCACCGCCGGCTTCGTCCTGCAGTGGCGCCTCGCGCTGGTGCTGCTGGCCGTCTTCCCGCTGGTGGTGGCCGCCACCGTTCTGCAGAAGATGTTCCTCAAGGGGTTCTCGGGCGACCTGGAGCGGGCGCACGCGAGGGCGACGCAGATCGCGGGAGAGGCGGTGGCGAACGTGCGCACCGTGGCGGCGTTCGGGTCGGAGGCGAAGATCGTGGGGCTGTTCGAGGCGAACCTGGCGGGGCCGCTCCGGCGGTGCTTCTGGAAGGGGCAGATCGCCGGGAGCGGGTACGGGGTGGCGCAGTTCCTGCTGTACGCGTCGTACGCGCTGGGGCTGTGGTACGCGGCGTGGCTGGTGAAGCACGGCGTGTCGGACTTCTCCAAGACCATCCGGGTGTTCATGGTGCTGATGGTGTCGGCCAACGGCGCCGCGGAGACGCTGACGCTGGCGCCGGACTTCGTGAAGGGCGGGCGGGCGATGCAGGCGGTGTTCGAGGCGATGGACCGGAGGACAGAGATCGAGCCGGACGACGTGGACGCGGCGGCGGTGCCGGAGCGGCCCCGGGGGGAGGTTGAGCTGAAGCACGTGGACTTCGCGTACCCGTCGCGGCCGGAGGTGCAGGTGTTCCGGGACCTGAGCCTGAGGGCGCGGGCGGGGCGGACGCTGGCGCTGGTGGGGGCGAGCGGGTGCGGCAAGAGCTCGGTGCTGGCGCTGGTGCAGCGCTTCTACGAGCCCAACTCCGGGCGGGTGCTCCTGGACGGCCGGGACCTGCGCAAGTTCAACCTGCGGTCCCTGCGTCGCGCCATGGCGCTGGTGCCGCAGGAGCCCTTCCTTTTCGCGGCCACCATCCACGACAACATCGCGTACGGGCGCGAGGGGGCGACGGAGGCGGAGGTGGTGGAGGCGGCGACGGCGGCCAACGCGCACAAGTTCATATCGGCGCTGCCGGAGGGGTACGGGACGTTGGTCGGGGAGCGCGGGGTGCAGCTGTCGGGCGGGCAGCGCCAGCGGATCGCCATCGCGCGGGCGCTGGTGAAGCAGGCGCCCATCCTGCTGCTGGACGAGGCCACCAGCGCGCTGGACGCCGAGTCGGAGCGGAGCGTGCAGGAGGCGCTCGCCTCCTCCTCTGGCTCCGGCCGCACCACCATCGTGGTGGCCCACCGTCTGGCCACCGTCCGCAACGCCCACACCATCGCCGTCATCGACGACGGCAAGGTGGCGGAGCAGGGCTCGCACTCCCACCTGCTCAACCACCACCCCGATGGCTGCTACGCGCGCATGCTGCAGCTCCAGCGCCTCTCCCACTCCCACGTTGCGCCGGGCCCCTCCTCCTCAACAACAACACACGGCACCTAG
Protein Sequence
- >LOC_Os08g45030.1
MEEEIKGRVVVLGADAAADPELEAFHLPSADQPPHSHLLHHHHSPQSHPQPDAPAAAAPPPPAPLTPPPPKSPPPPPHIQTTDLPPPKPLPPAPLRQLFSFADGLDYVLMTLGTLGALVHGCSLPVFLRFFADLVDSFGSHAAHPDTMLRLVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIRYLHAALHQDVSFFDTDVRTSDVIHAINADAVVVQDAISEKLGNLIHYLATFVSGFVVGFTAAWQLALVTLAVVPLIAVIGGLSAAALAKLSSRSQDALSDASGIAEQALAQIRIVQSFVGEERVMRAYSAALAVAQRIGYRSGFAKGIGLGGTYFTVFCCYALLLWYGGHLVRRAHTNGGLAIATMFSVMIGGLALGQSAPSMAAFAKARVAAAKIFRMMEHKPSMEREGGVELEAVTGRVELRDVEFSYPSRPDVGILRGLSLSVPAGKTIALVGSSGSGKSTVVSLIERFYEPNAGTILLDGHDLRDLNLRWLRRQIGLVSQEPALFATTIRENLLLGRDGATQEELEEAARVANAHSFIVKLPDAYNTQVGERGLQLSGGQKQRIAIARAMLRNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQGGAISEVGTHDELMARGDGTYARLIRMQEQAHEAALVAARRSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDADFITGLGLGVDSKQQQQQHYFRVQASSFWRLAKMNSPEWGYALVASLGSMVCGSFSAIFAYVLSAVLSVYYAPDAAYMDRQIAKYCYLLIGMSSAALLFNTVQHLFWDTVGENLTKRVRERMLAAVLRNEIAWFDMEDNSSARIAARLALDAQNVRSAIGDRISIIVQNSALMLVACTAGFVLQWRLALVLLAVFPLVVAATVLQKMFLKGFSGDLERAHARATQIAGEAVANVRTVAAFGSEAKIVGLFEANLAGPLRRCFWKGQIAGSGYGVAQFLLYASYALGLWYAAWLVKHGVSDFSKTIRVFMVLMVSANGAAETLTLAPDFVKGGRAMQAVFEAMDRRTEIEPDDVDAAAVPERPRGEVELKHVDFAYPSRPEVQVFRDLSLRARAGRTLALVGASGCGKSSVLALVQRFYEPNSGRVLLDGRDLRKFNLRSLRRAMALVPQEPFLFAATIHDNIAYGREGATEAEVVEAATAANAHKFISALPEGYGTLVGERGVQLSGGQRQRIAIARALVKQAPILLLDEATSALDAESERSVQEALASSSGSGRTTIVVAHRLATVRNAHTIAVIDDGKVAEQGSHSHLLNHHPDGCYARMLQLQRLSHSHVAPGPSSSTTTHGT*