Information report for SLC1
Gene Details
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Functional Descriptions
- Down-regulation of SLC1 and SLC2 at the same time in the SLC1-SLC2 RNAi lines resulted in a severe defect in early leaf development.
- Two dioxygenases, SLC1 and SLC2, play essential roles in shoot development of rice.
- Here, we report that two dioxygenase-encoding genes, SLC1 (slender and crinklyleaf 1) and SLC2 (slender and crinklyleaf 2), play essential roles in shoot development and SA production in rice (Oryza sativa).
- Collectively, our data revealed the importance of SLC1 and SLC2 in the shoot development of rice.
- Disruption of SLC1 or SLC2 led to dwarf plants.
- Enhanced SA level in the SLC1-OE plants and decreased SA level in the SLC1 and slc2 mutants were scored.
Functional Keywords
- leaf , leaf-development , shoot , development , dwarf , sa , SA
Literature and News
Gene Resources
- UniProt: Q6YYX9
- EMBL: AK107117, AK107230, AP005524
- AlphaFoldDB: Q6YYX9
- EnsemblPlants: Os08t0560000-01
- Gramene: Os08t0560000-01
- KEGG: dosa:Os08g0560000, osa:4346321
- InterPro: IPR005123, IPR026992, IPR027443
Sequences
cDNA Sequence
- >LOC_Os08g44590.1
GCACAAAGCAAACAGCTAATTTGTGTAGCGATCCAGCTACAGACAGACGACACCACAAACATAGCTAAGTAGCTTAGGCTTAGGCTTAGCTAAGTACAAGTGCACTTGCGCTTCAAATTTTGCCGGAAAAGCGACCACTAATTAAGCTACTGGCTAGAATGGCGATCGTTGACTTGGTCAATGCCGGAGAGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGGCGACGGCGGCGTGGACGACAGCCGCGAGTACTACTGCCGGCGAGGCGTCCGGCACCTGTGCGACAGCGGCATTACCAGGCTTCCCGGCAACTACGTCCTCCCGGCCTCCGACCGCCCTGGCCAAGCCGCCGGCGCCGCCGCCGCCGCCGGGGGGTCAGTGAAGCTCCCCGTGGTGGACCTGTCGCGCCTCCGCGTCCCTTCGGAGCGCGGCGCGGTGCTCCGGACGCTGGACGCGGCGTGCCGGGAGTACGGGTTCTTCCAGGTGGTGAACCACGGCGTGGGCGGCGAGGTGGTGGGCGGCATGCTCGACGTGGCGCGCCGCTTCTTCGAGCTGCCGCAGCCGGAGCGGGAGCGGTACATGTCCGCCGACGTGCGGGCGCCGGTGAGGTACGGCACCAGCTTCAACCAGGTGAGGGACGCCGTGCTGTGCTGGCGCGACTTCCTCAAGCTCGCCTGCATGCCGCTCGCCGCCGTCGTCGAGTCATGGCCCACCTCGCCGGCCGACCTGCGGGAGGTGGCGTCGAGGTACGCGGAGGCGAACCAGCGCGTGTTCATGGAGGTGATGGAGGCGGCGCTGGAGGCGCTGGGCGTGGGCGGCGGCGGCGTGATGGAGGACCTGGCGGCGGGGACACAGATGATGACGGTGAACTGCTACCCGGAGTGCCCGCAGCCGGAGCTGACGTTGGGGATGCCGCCGCACTCGGACTACGGCTTCCTCACGCTGGTGCTCCAGGACGAGGTGGCCGGACTCCAGGTGATGCACGCCGGCGAGTGGCTCACCGTCGACCCGCTCCCGGGCTCCTTCGTCGTCAACGTCGGCGACCACTTGGAGATATTGAGCAATGGACGGTACAGGAGCGTGCTGCACAGGGTGAAGGTGAACTCGAGGAGGCTTCGGGTGTCGGTGGCGTCGTTCCACAGCGTGGCGCCGGAGAGGGTGGTGTCGCCGGCGCCGGAGCTCATCGACGACCGCCACCCGCGCCGCTACATGGACACCGACCTCGCCACCTTCCTCGCCTACCTCGCCTCCGCCGCCGGCAACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGATCGATCCATTCTTAATTGGATCATCTCTACACTATAATTAACTGGATCGGAGTACTCCTGTAATTATAATTATAATTATATTAGCTACTACTACTCATGATCCACCCCCGGTAATTATAATTGCGGAATTGCCTTGGCTAAGTTAGCTCCAAACACAGCCCACAGATCATCGATATGATTGATCAAACTCGATCTCACTTAATTAATTATATAACTACTATATTCACCTATATAGCTAGCTTGCTGTTAGCAGCTTAATTGCCGGAGTAAAATTAAATCAAATCAATCGATCGATTGATCGACAAGAGAACAAGTCAACAGCAGGGCCCAACTCCCTGAACGAGGCAGAGGCAGGATTTGACCGGTCAAACCTAGCTTTTCAGCTTAATTGCCTTCCCAACAATTCGATTGGCGCGCATTGACTAGCTAATAATATCCATACATATGAGAGTATACTATAATTAAGTTGTCTTGTTCTCATCGATCGATTGGTCGTCTGAAAAAGCCAAAGCCAGCTGTGGGTTTGCGTATGTATGCATGTAGTATATTTTTTTTCTAGTTATTAAAATAGTAAGTTGTTGTTTTGACTTTTCAAAGTCAACGTGATTGTACCTTGACGTACATAGTACTGAATCATGTACGTCATCACATATATATATATATTCCGAAAGAGTGTTCATCTAATTAAAG
CDS Sequence
- >LOC_Os08g44590.1
ATGGCGATCGTTGACTTGGTCAATGCCGGAGAGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGGCGACGGCGGCGTGGACGACAGCCGCGAGTACTACTGCCGGCGAGGCGTCCGGCACCTGTGCGACAGCGGCATTACCAGGCTTCCCGGCAACTACGTCCTCCCGGCCTCCGACCGCCCTGGCCAAGCCGCCGGCGCCGCCGCCGCCGCCGGGGGGTCAGTGAAGCTCCCCGTGGTGGACCTGTCGCGCCTCCGCGTCCCTTCGGAGCGCGGCGCGGTGCTCCGGACGCTGGACGCGGCGTGCCGGGAGTACGGGTTCTTCCAGGTGGTGAACCACGGCGTGGGCGGCGAGGTGGTGGGCGGCATGCTCGACGTGGCGCGCCGCTTCTTCGAGCTGCCGCAGCCGGAGCGGGAGCGGTACATGTCCGCCGACGTGCGGGCGCCGGTGAGGTACGGCACCAGCTTCAACCAGGTGAGGGACGCCGTGCTGTGCTGGCGCGACTTCCTCAAGCTCGCCTGCATGCCGCTCGCCGCCGTCGTCGAGTCATGGCCCACCTCGCCGGCCGACCTGCGGGAGGTGGCGTCGAGGTACGCGGAGGCGAACCAGCGCGTGTTCATGGAGGTGATGGAGGCGGCGCTGGAGGCGCTGGGCGTGGGCGGCGGCGGCGTGATGGAGGACCTGGCGGCGGGGACACAGATGATGACGGTGAACTGCTACCCGGAGTGCCCGCAGCCGGAGCTGACGTTGGGGATGCCGCCGCACTCGGACTACGGCTTCCTCACGCTGGTGCTCCAGGACGAGGTGGCCGGACTCCAGGTGATGCACGCCGGCGAGTGGCTCACCGTCGACCCGCTCCCGGGCTCCTTCGTCGTCAACGTCGGCGACCACTTGGAGATATTGAGCAATGGACGGTACAGGAGCGTGCTGCACAGGGTGAAGGTGAACTCGAGGAGGCTTCGGGTGTCGGTGGCGTCGTTCCACAGCGTGGCGCCGGAGAGGGTGGTGTCGCCGGCGCCGGAGCTCATCGACGACCGCCACCCGCGCCGCTACATGGACACCGACCTCGCCACCTTCCTCGCCTACCTCGCCTCCGCCGCCGGCAACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGA
Protein Sequence
- >LOC_Os08g44590.1
MAIVDLVNAGEQQQMGSKRAAAEDGDGGVDDSREYYCRRGVRHLCDSGITRLPGNYVLPASDRPGQAAGAAAAAGGSVKLPVVDLSRLRVPSERGAVLRTLDAACREYGFFQVVNHGVGGEVVGGMLDVARRFFELPQPERERYMSADVRAPVRYGTSFNQVRDAVLCWRDFLKLACMPLAAVVESWPTSPADLREVASRYAEANQRVFMEVMEAALEALGVGGGGVMEDLAAGTQMMTVNCYPECPQPELTLGMPPHSDYGFLTLVLQDEVAGLQVMHAGEWLTVDPLPGSFVVNVGDHLEILSNGRYRSVLHRVKVNSRRLRVSVASFHSVAPERVVSPAPELIDDRHPRRYMDTDLATFLAYLASAAGNHKSFLHSRRLY*