Gene Details:
- MSU gene ID: LOC_Os08g44590
- RAPdb gene ID: Os08g0560000
- Gene Symbol: SLC1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Down-regulation of SLC1 and SLC2 at the same time in the SLC1-SLC2 RNAi lines resulted in a severe defect in early leaf development.
- Two dioxygenases, SLC1 and SLC2, play essential roles in shoot development of rice.
- Here, we report that two dioxygenase-encoding genes, SLC1 (slender and crinklyleaf 1) and SLC2 (slender and crinklyleaf 2), play essential roles in shoot development and SA production in rice (Oryza sativa).
- Collectively, our data revealed the importance of SLC1 and SLC2 in the shoot development of rice.
- Disruption of SLC1 or SLC2 led to dwarf plants.
- Enhanced SA level in the SLC1-OE plants and decreased SA level in the SLC1 and slc2 mutants were scored.
Function-related keywords:
- leaf , leaf-development , shoot , development , dwarf , sa , SA
Literature:
- Two SLENDER AND CRINKLY LEAF dioxygenases play an essential role in rice shoot development . DOI: 10.1093/jxb/erz501 ; PMID: 31701152
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os08g44590.1
GCACAAAGCAAACAGCTAATTTGTGTAGCGATCCAGCTACAGACAGACGACACCACAAACATAGCTAAGTAGCTTAGGCTTAGGCTTAGCTAAGTACAAGTGCACTTGCGCTTCAAATTTTGCCGGAAAAGCGACCACTAATTAAGCTACTGGCTAGAATGGCGATCGTTGACTTGGTCAATGCCGGAGAGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGGCGACGGCGGCGTGGACGACAGCCGCGAGTACTACTGCCGGCGAGGCGTCCGGCACCTGTGCGACAGCGGCATTACCAGGCTTCCCGGCAACTACGTCCTCCCGGCCTCCGACCGCCCTGGCCAAGCCGCCGGCGCCGCCGCCGCCGCCGGGGGGTCAGTGAAGCTCCCCGTGGTGGACCTGTCGCGCCTCCGCGTCCCTTCGGAGCGCGGCGCGGTGCTCCGGACGCTGGACGCGGCGTGCCGGGAGTACGGGTTCTTCCAGGTGGTGAACCACGGCGTGGGCGGCGAGGTGGTGGGCGGCATGCTCGACGTGGCGCGCCGCTTCTTCGAGCTGCCGCAGCCGGAGCGGGAGCGGTACATGTCCGCCGACGTGCGGGCGCCGGTGAGGTACGGCACCAGCTTCAACCAGGTGAGGGACGCCGTGCTGTGCTGGCGCGACTTCCTCAAGCTCGCCTGCATGCCGCTCGCCGCCGTCGTCGAGTCATGGCCCACCTCGCCGGCCGACCTGCGGGAGGTGGCGTCGAGGTACGCGGAGGCGAACCAGCGCGTGTTCATGGAGGTGATGGAGGCGGCGCTGGAGGCGCTGGGCGTGGGCGGCGGCGGCGTGATGGAGGACCTGGCGGCGGGGACACAGATGATGACGGTGAACTGCTACCCGGAGTGCCCGCAGCCGGAGCTGACGTTGGGGATGCCGCCGCACTCGGACTACGGCTTCCTCACGCTGGTGCTCCAGGACGAGGTGGCCGGACTCCAGGTGATGCACGCCGGCGAGTGGCTCACCGTCGACCCGCTCCCGGGCTCCTTCGTCGTCAACGTCGGCGACCACTTGGAGATATTGAGCAATGGACGGTACAGGAGCGTGCTGCACAGGGTGAAGGTGAACTCGAGGAGGCTTCGGGTGTCGGTGGCGTCGTTCCACAGCGTGGCGCCGGAGAGGGTGGTGTCGCCGGCGCCGGAGCTCATCGACGACCGCCACCCGCGCCGCTACATGGACACCGACCTCGCCACCTTCCTCGCCTACCTCGCCTCCGCCGCCGGCAACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGATCGATCCATTCTTAATTGGATCATCTCTACACTATAATTAACTGGATCGGAGTACTCCTGTAATTATAATTATAATTATATTAGCTACTACTACTCATGATCCACCCCCGGTAATTATAATTGCGGAATTGCCTTGGCTAAGTTAGCTCCAAACACAGCCCACAGATCATCGATATGATTGATCAAACTCGATCTCACTTAATTAATTATATAACTACTATATTCACCTATATAGCTAGCTTGCTGTTAGCAGCTTAATTGCCGGAGTAAAATTAAATCAAATCAATCGATCGATTGATCGACAAGAGAACAAGTCAACAGCAGGGCCCAACTCCCTGAACGAGGCAGAGGCAGGATTTGACCGGTCAAACCTAGCTTTTCAGCTTAATTGCCTTCCCAACAATTCGATTGGCGCGCATTGACTAGCTAATAATATCCATACATATGAGAGTATACTATAATTAAGTTGTCTTGTTCTCATCGATCGATTGGTCGTCTGAAAAAGCCAAAGCCAGCTGTGGGTTTGCGTATGTATGCATGTAGTATATTTTTTTTCTAGTTATTAAAATAGTAAGTTGTTGTTTTGACTTTTCAAAGTCAACGTGATTGTACCTTGACGTACATAGTACTGAATCATGTACGTCATCACATATATATATATATTCCGAAAGAGTGTTCATCTAATTAAAG
CDS Sequence
- >LOC_Os08g44590.1
ATGGCGATCGTTGACTTGGTCAATGCCGGAGAGCAGCAGCAGATGGGCAGCAAGAGAGCGGCGGCGGAGGATGGCGACGGCGGCGTGGACGACAGCCGCGAGTACTACTGCCGGCGAGGCGTCCGGCACCTGTGCGACAGCGGCATTACCAGGCTTCCCGGCAACTACGTCCTCCCGGCCTCCGACCGCCCTGGCCAAGCCGCCGGCGCCGCCGCCGCCGCCGGGGGGTCAGTGAAGCTCCCCGTGGTGGACCTGTCGCGCCTCCGCGTCCCTTCGGAGCGCGGCGCGGTGCTCCGGACGCTGGACGCGGCGTGCCGGGAGTACGGGTTCTTCCAGGTGGTGAACCACGGCGTGGGCGGCGAGGTGGTGGGCGGCATGCTCGACGTGGCGCGCCGCTTCTTCGAGCTGCCGCAGCCGGAGCGGGAGCGGTACATGTCCGCCGACGTGCGGGCGCCGGTGAGGTACGGCACCAGCTTCAACCAGGTGAGGGACGCCGTGCTGTGCTGGCGCGACTTCCTCAAGCTCGCCTGCATGCCGCTCGCCGCCGTCGTCGAGTCATGGCCCACCTCGCCGGCCGACCTGCGGGAGGTGGCGTCGAGGTACGCGGAGGCGAACCAGCGCGTGTTCATGGAGGTGATGGAGGCGGCGCTGGAGGCGCTGGGCGTGGGCGGCGGCGGCGTGATGGAGGACCTGGCGGCGGGGACACAGATGATGACGGTGAACTGCTACCCGGAGTGCCCGCAGCCGGAGCTGACGTTGGGGATGCCGCCGCACTCGGACTACGGCTTCCTCACGCTGGTGCTCCAGGACGAGGTGGCCGGACTCCAGGTGATGCACGCCGGCGAGTGGCTCACCGTCGACCCGCTCCCGGGCTCCTTCGTCGTCAACGTCGGCGACCACTTGGAGATATTGAGCAATGGACGGTACAGGAGCGTGCTGCACAGGGTGAAGGTGAACTCGAGGAGGCTTCGGGTGTCGGTGGCGTCGTTCCACAGCGTGGCGCCGGAGAGGGTGGTGTCGCCGGCGCCGGAGCTCATCGACGACCGCCACCCGCGCCGCTACATGGACACCGACCTCGCCACCTTCCTCGCCTACCTCGCCTCCGCCGCCGGCAACCACAAGTCCTTCCTCCACTCCAGGAGGCTCTACTGA
Protein Sequence
- >LOC_Os08g44590.1
MAIVDLVNAGEQQQMGSKRAAAEDGDGGVDDSREYYCRRGVRHLCDSGITRLPGNYVLPASDRPGQAAGAAAAAGGSVKLPVVDLSRLRVPSERGAVLRTLDAACREYGFFQVVNHGVGGEVVGGMLDVARRFFELPQPERERYMSADVRAPVRYGTSFNQVRDAVLCWRDFLKLACMPLAAVVESWPTSPADLREVASRYAEANQRVFMEVMEAALEALGVGGGGVMEDLAAGTQMMTVNCYPECPQPELTLGMPPHSDYGFLTLVLQDEVAGLQVMHAGEWLTVDPLPGSFVVNVGDHLEILSNGRYRSVLHRVKVNSRRLRVSVASFHSVAPERVVSPAPELIDDRHPRRYMDTDLATFLAYLASAAGNHKSFLHSRRLY*