Information report for PCF2;OsPCF2
Gene Details
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Functional Descriptions
- A supershift assay using an anti-PCF2 antibody showed the involvement of PCF2 in site IIa (site IIb) binding activities in rice nuclear extracts, particularly in meristematic tissues.
- Our results suggest that PCF1 and PCF2 are involved in meristematic tissue-specific expression of the rice PCNA gene through binding to sites IIa and IIb and formation of homodimers or heterodimers.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q6ZBH6
- EMBL: AK060536, AK119660, AP004632
- AlphaFoldDB: Q6ZBH6
- EnsemblPlants: Os08t0544800-01
- Gramene: Os08t0544800-01
- KEGG: dosa:Os08g0544800
- Orthologous matrix: GANHMIP
- InterPro: IPR005333, IPR017887
- PANTHER: PTHR31072, PTHR31072:SF183
- PROSITE: PS51369
- OrthoDB: Q6ZBH6
- SWISS-MODEL: Q6ZBH6
- eggNOG: ENOG502QR5H
Sequences
cDNA Sequence
- >LOC_Os08g43160.1
TTAAGACCGGGCCTAATCCAAATGGCCACTCGTAATACTGGCTTAATTACTCATCAATGCGTTGCAAACTTGACTAGAGTACAGTATCATGTGTGTGGGGCCCACGCGAGGCGGCCGGGTCCCCCGTGTCAGGAAGGGTGAGGAAGCGACAACGCGTCCTGGGCCGTCGGATCCGCACCGGCGCGCGGATTAATGCGGCGGGGCCCGGTACAGGTCACCACGGGTCCCCACCACGACCCGGTTGGGGCGGTGGCCCCGGGCCACATCGACCGCACAAGGGACCCCACCGCCAAGTGAGACCACCCCCACCACTTGATAAATCCAACTCACCCCATTCGCAGCAGCGAAGCGAAGCGAGTGAACACACACCTCTCCCCCCACCCTTTCCCGCAACACGCGAAAAGAGAGGCGAGGCGGAAACAAGCCCGGGCTTTTCCGTCTCGTCTCGTCTCCCTCCCAAACCGAACCAATCCAATCTCTTCTCATCCATCCCCATGGAGGCGCAGGCGCAGGACAAGGCGGAGGAGGGGGAGGAGGAGGGCACGCGGCAGCAACACGCGCAGGCTGGGCCGGTCGGTGCGGCTGGTGGTGGTGGTGGGGGGGGCGCGGCGGCTGTGGCGATGAGCGCCATCCCCATGAACAGCTGGCTCGTGCCCAAGCCCGAACCGGTGGAGTTCTTCGGCGGGATGGCCATGGTGCGCAAGCCGCCGCCGAGGAACCGGGACCGGCACACCAAGGTGGAGGGGCGCGGGAGGCGGATCCGCATGCCGGCGGCGTGCGCGGCCAGGATCTTCCAGCTCACGCGGGAGCTAGGGCACAAGTCCGACGGCGAGACCATCCGGTGGTTGCTGCAGCAGTCGGAGCCGGCAATCATCGCGGCCACCGGAACCGGCACCGTCCCGGCGATCGCGACCACCGTCGATGGCGTGCTCCGCATCCCCACCCAGTCGTCGTCGTCCTCTGGCCCGGCGTCCTCCGCGGTGGTCGACGGTGAGGAGTCCTCGGCCAAGCGACGCCGCAAGCTGCAGCCCACGCGCGCGGTGGCTGGCGCGTCTCCGCTGGCCACGGCGGCGCCCGCGGCGTACTACCCGGTCATCGCTGACCCTCTCCTGCAAGGTAGCGGCGGCGCGGCGATTTCAGTCCCGAGCGGCCTCGCTCCCATCACCGCCACCGGCGCTCCCCAAGGCCTCGTGCCCGTCTTCGCCGTCCCGGCCACTGGCAGCCCCGCGGTCGCCGGCGGCAACCGCATGATCCCGCAAGCCACCGCCGTATGGATGGTCCCGCAGCCCGCAGGCGCCGCGGGCGCGGGCAACCAACCCACGCAATTCTGGGCCATCCAATCCGCGCCCCAGCTCGTGAACTTCGCCGGCGCGCAGTTCCCGACGGCGATTAACGTCGCCGACTTCCAGCAGCAGCAACAACAGCAGCCGGTGTCAACAACCATCGTCCAGAACAGCAACTCGGGCGAGCACATGCACTTCTCCGGCGCCGACTCCCACGAGCAGCAGCGGCGCGGGCGGAAGGAAGGCAACAGCGGCGGCGTGGTGGACCACCCGGAGGAGGACGAAGACGACGACGACGACGAGCCGGTCTCCGACTCCAGCCCGGAAGAGTAGCAAACACACACAGCACAACACAAAAAAAGCAAGCGAGGCGAGCACTCCACTGCACGCCAAAAAGTCCACAAGTCCCCCCCACACACAAAGCTTAGGTTCCTTTTTGCTCCGATTCAATTTCTCGATCGTTTCTTTCCCGCAATATTCCTCATCCTTGTCATGATGAACTAGTAATTACTCCCGCGTGTTGTGCTGTGCTGTGCTGGTACTACTCCTTACTTTCCCGTCCTTAGCTCAGTGTTTAGTCTTAGAGAAGAAGAAGATGATGATGATTTAGCATGCAAATGAGCAGTTGACAATTTGACATAAGATTAAGTCTAATCCAGTACTACTTGCTGTGACA
CDS Sequence
- >LOC_Os08g43160.1
ATGGAGGCGCAGGCGCAGGACAAGGCGGAGGAGGGGGAGGAGGAGGGCACGCGGCAGCAACACGCGCAGGCTGGGCCGGTCGGTGCGGCTGGTGGTGGTGGTGGGGGGGGCGCGGCGGCTGTGGCGATGAGCGCCATCCCCATGAACAGCTGGCTCGTGCCCAAGCCCGAACCGGTGGAGTTCTTCGGCGGGATGGCCATGGTGCGCAAGCCGCCGCCGAGGAACCGGGACCGGCACACCAAGGTGGAGGGGCGCGGGAGGCGGATCCGCATGCCGGCGGCGTGCGCGGCCAGGATCTTCCAGCTCACGCGGGAGCTAGGGCACAAGTCCGACGGCGAGACCATCCGGTGGTTGCTGCAGCAGTCGGAGCCGGCAATCATCGCGGCCACCGGAACCGGCACCGTCCCGGCGATCGCGACCACCGTCGATGGCGTGCTCCGCATCCCCACCCAGTCGTCGTCGTCCTCTGGCCCGGCGTCCTCCGCGGTGGTCGACGGTGAGGAGTCCTCGGCCAAGCGACGCCGCAAGCTGCAGCCCACGCGCGCGGTGGCTGGCGCGTCTCCGCTGGCCACGGCGGCGCCCGCGGCGTACTACCCGGTCATCGCTGACCCTCTCCTGCAAGGTAGCGGCGGCGCGGCGATTTCAGTCCCGAGCGGCCTCGCTCCCATCACCGCCACCGGCGCTCCCCAAGGCCTCGTGCCCGTCTTCGCCGTCCCGGCCACTGGCAGCCCCGCGGTCGCCGGCGGCAACCGCATGATCCCGCAAGCCACCGCCGTATGGATGGTCCCGCAGCCCGCAGGCGCCGCGGGCGCGGGCAACCAACCCACGCAATTCTGGGCCATCCAATCCGCGCCCCAGCTCGTGAACTTCGCCGGCGCGCAGTTCCCGACGGCGATTAACGTCGCCGACTTCCAGCAGCAGCAACAACAGCAGCCGGTGTCAACAACCATCGTCCAGAACAGCAACTCGGGCGAGCACATGCACTTCTCCGGCGCCGACTCCCACGAGCAGCAGCGGCGCGGGCGGAAGGAAGGCAACAGCGGCGGCGTGGTGGACCACCCGGAGGAGGACGAAGACGACGACGACGACGAGCCGGTCTCCGACTCCAGCCCGGAAGAGTAG
Protein Sequence
- >LOC_Os08g43160.1
MEAQAQDKAEEGEEEGTRQQHAQAGPVGAAGGGGGGGAAAVAMSAIPMNSWLVPKPEPVEFFGGMAMVRKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIAATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPTRAVAGASPLATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPATGSPAVAGGNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQSAPQLVNFAGAQFPTAINVADFQQQQQQQPVSTTIVQNSNSGEHMHFSGADSHEQQRRGRKEGNSGGVVDHPEEDEDDDDDEPVSDSSPEE*