Gene Details:
- MSU gene ID: LOC_Os08g42440
- RAPdb gene ID: Os08g0536300
- Gene Symbol: OsCOL15
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Real-time quantitative RT-PCR analysis of flowering regulator gene expression suggested that OsCOL15 suppresses flowering by up-regulating the flowering repressor Grain number, plant height and heading date 7 (Ghd7) and down-regulating the flowering activator Rice Indeterminate 1 (RID1), thus leading to the down-regulation of the flowering activators Early heading date 1, Heading date 3a, and RICE FLOWERING LOCUS T1.
- We determined that OsCOL15 is most highly expressed in young organs and exhibits a diurnal expression pattern typical of other floral regulators.
- These results demonstrate that OsCOL15 is an important floral regulator acting upstream of Ghd7 and RID1 in the rice photoperiodic flowering-time regulatory network.
- Consistent with a function in transcriptional regulation, OsCOL15 localized to the nucleus.
Function-related keywords:
- grain , grain-number , floral , nucleus , height , heading-date , plant-height
Literature:
- The rice CONSTANS-like protein OsCOL15 suppresses flowering by promoting Ghd7 and repressing RID1 . DOI: 10.1016/j.bbrc.2017.11.095 ; PMID: 29154991
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os08g42440.1
GCTCCGCACCGGATCTCATCTCATTCTCGCCGTCTTCTCTTCTCCACCACCTCGCTGCCTTCTCCCTCCTCCTCATTCCTGCATTGCATTGCTTCCGAGCTCAAAAGTCGTCGTAGACCCCCGCCTCCTTCCTCCTCCTCCTCGCGCTTCGATTTGGTTTGGTTTGATTCGGTTTGCGAGATGAAGGATGGTGGTGGAGGAGGAGGGAGGGGGCAGCAGCAGCAGTGGCCTTGCGACTACTGCGGGGAGGCGGCGGCGGCGCTGCACTGCAGGGCGGACGCCGCGAGGCTGTGCGTCGCCTGCGACCGCCACGTGCACGCCGCCAACGCGCTCTCGCGGAAGCACGTCCGCGCCCCGCTCTGCGCCGCCTGCGCCGCCAGGCCGGCCGCCGCGCGCGTCGCCTCCGCCTCGGCGCCGGCGTTCCTGTGCGCGGACTGCGACACCGGGTGCGGCGGCGACGACGGCGCGGCCTTGCGGGTGCCCGTCGAGGGGTTCTCCGGGTGCCCCGCCGCCGCCGAGCTCGCCGCGTCGTGGGGGCTCGACCTCCCCGGCGGCTGCGGCGGCGAGGAGGAGGAGGCCGACGACGCGTTCTTCTCGGCGCTCGACTACTCCATGCTCGCCGTCGACCCCGTGCTGCGCGACCTCTACGTGCCATGCGACCCGCCCGAGGTGGTGGTGGCCGGCGGCGGGCGGCGACTCAAGGGGGAGGCGCTCGGCCACCAGCTCGCCGAGATGGCGCGCCGGGAGGCCGAGACGGCGCACCCGCACACGCAGCCGCACTCGGATCTGAGCCCCCGCACGCCTCGCCGGACCTCCGCCGCGGCGAGCGGCCGCCTGCAGGAAAAGCAAGCTCCCCCGCCGTTGCCTCATGCTGCTGCGACGGCGGCGCCGCTGCCGTACACTTCACTGCTCATGATGGCGCCGGCCAACTGCACCGAGCTCATGGAAAACAACCGTGTTGGAGACGAAGATGAAAATGTTCTGTGGGAGAGCACCGCGCCATCAGTGCCACCAACCCAGATATGGGATTTTAATTTGGGAAAATCAAGGGATCACAATGAGAACTCTGCACTTGAAGTTGGATTTGGCTCAAACAATGGAGGCTTTATGATTAAGAGTTATAATGACATGCTCAAGGAGATTTCTTCTGGGACAACGAAGGATCTGGAAGATATTTATGACTCAAGATATTTTGCAGCTGCCGAAGATATCATGTCGACTAATGTCTGTCAGCTGTCATCGAAAAATCCAAGCACCAGGAGCAACAAACGGAAGGCGAGCTCATGCGCTTCGACGATCGATGGACCGACAACTTCCACAAGCCATGTACCTGCTGCTTCAGGGGCATTGGGGGGCTCTTCGAACGACAGAGGATCGGCTCTCCCCAAGGAGATTTCCTTCTGTGATCAGACCGTCGTCCCTACCGGAGCCGATCAGAGGCCATGTACCATCAAGATCGACAGCGAGACGCTCGCGCAGAACAGGGACAGCGCGATGCAGCGGTACAGGGAGAAGAAGAAGAACCGCAGGTATGAGAAGCACATCAGGTACGAGTCGAGGAAGCTGAGAGCGGACACGAGGAAGAGGGTGAAAGGCCGGTTTGTGAAGTCGAACGGAGCACCTGATGATGTCAGCAATGGCGGGTGATCTCATCCCTGCAATCCCTGATAGCTAGCTGCAATGTACGTAGCCTGGCTTTTTGACGTTGCAGAGATCGATGTGGCCATATATATGCTGAGAGCTAAGTCTGAAATATGTTGCGTATGTTGTTACAACCTATGCACGCTCTGCTTAAGTCTGTCTGCTGCTGCATGTATTGTTCAGCTAAAATTTTTGCGTCCAAGAGTCGATCTTGATAATTAAGTACCCCTACTACAAATCTACACTACATACTGTAATAGACCTTAGATTTTTTTTCTCATCTCCTCGTAGAAATATATGGCATTTTATATATACGTAAATATGCACAAATAGCCACATTAATTATATATATGCACGAGATCATACTGAAATATGTTTCAGTCTGATTATGATTCTGATATACATATCCATGCATAAATCTCTACCGGCAATAAA
CDS Sequence
- >LOC_Os08g42440.1
ATGAAGGATGGTGGTGGAGGAGGAGGGAGGGGGCAGCAGCAGCAGTGGCCTTGCGACTACTGCGGGGAGGCGGCGGCGGCGCTGCACTGCAGGGCGGACGCCGCGAGGCTGTGCGTCGCCTGCGACCGCCACGTGCACGCCGCCAACGCGCTCTCGCGGAAGCACGTCCGCGCCCCGCTCTGCGCCGCCTGCGCCGCCAGGCCGGCCGCCGCGCGCGTCGCCTCCGCCTCGGCGCCGGCGTTCCTGTGCGCGGACTGCGACACCGGGTGCGGCGGCGACGACGGCGCGGCCTTGCGGGTGCCCGTCGAGGGGTTCTCCGGGTGCCCCGCCGCCGCCGAGCTCGCCGCGTCGTGGGGGCTCGACCTCCCCGGCGGCTGCGGCGGCGAGGAGGAGGAGGCCGACGACGCGTTCTTCTCGGCGCTCGACTACTCCATGCTCGCCGTCGACCCCGTGCTGCGCGACCTCTACGTGCCATGCGACCCGCCCGAGGTGGTGGTGGCCGGCGGCGGGCGGCGACTCAAGGGGGAGGCGCTCGGCCACCAGCTCGCCGAGATGGCGCGCCGGGAGGCCGAGACGGCGCACCCGCACACGCAGCCGCACTCGGATCTGAGCCCCCGCACGCCTCGCCGGACCTCCGCCGCGGCGAGCGGCCGCCTGCAGGAAAAGCAAGCTCCCCCGCCGTTGCCTCATGCTGCTGCGACGGCGGCGCCGCTGCCGTACACTTCACTGCTCATGATGGCGCCGGCCAACTGCACCGAGCTCATGGAAAACAACCGTGTTGGAGACGAAGATGAAAATGTTCTGTGGGAGAGCACCGCGCCATCAGTGCCACCAACCCAGATATGGGATTTTAATTTGGGAAAATCAAGGGATCACAATGAGAACTCTGCACTTGAAGTTGGATTTGGCTCAAACAATGGAGGCTTTATGATTAAGAGTTATAATGACATGCTCAAGGAGATTTCTTCTGGGACAACGAAGGATCTGGAAGATATTTATGACTCAAGATATTTTGCAGCTGCCGAAGATATCATGTCGACTAATGTCTGTCAGCTGTCATCGAAAAATCCAAGCACCAGGAGCAACAAACGGAAGGCGAGCTCATGCGCTTCGACGATCGATGGACCGACAACTTCCACAAGCCATGTACCTGCTGCTTCAGGGGCATTGGGGGGCTCTTCGAACGACAGAGGATCGGCTCTCCCCAAGGAGATTTCCTTCTGTGATCAGACCGTCGTCCCTACCGGAGCCGATCAGAGGCCATGTACCATCAAGATCGACAGCGAGACGCTCGCGCAGAACAGGGACAGCGCGATGCAGCGGTACAGGGAGAAGAAGAAGAACCGCAGGTATGAGAAGCACATCAGGTACGAGTCGAGGAAGCTGAGAGCGGACACGAGGAAGAGGGTGAAAGGCCGGTTTGTGAAGTCGAACGGAGCACCTGATGATGTCAGCAATGGCGGGTGA
Protein Sequence
- >LOC_Os08g42440.1
MKDGGGGGGRGQQQQWPCDYCGEAAAALHCRADAARLCVACDRHVHAANALSRKHVRAPLCAACAARPAAARVASASAPAFLCADCDTGCGGDDGAALRVPVEGFSGCPAAAELAASWGLDLPGGCGGEEEEADDAFFSALDYSMLAVDPVLRDLYVPCDPPEVVVAGGGRRLKGEALGHQLAEMARREAETAHPHTQPHSDLSPRTPRRTSAAASGRLQEKQAPPPLPHAAATAAPLPYTSLLMMAPANCTELMENNRVGDEDENVLWESTAPSVPPTQIWDFNLGKSRDHNENSALEVGFGSNNGGFMIKSYNDMLKEISSGTTKDLEDIYDSRYFAAAEDIMSTNVCQLSSKNPSTRSNKRKASSCASTIDGPTTSTSHVPAASGALGGSSNDRGSALPKEISFCDQTVVPTGADQRPCTIKIDSETLAQNRDSAMQRYREKKKNRRYEKHIRYESRKLRADTRKRVKGRFVKSNGAPDDVSNGG*