Gene Details:
- MSU gene ID: LOC_Os08g37890
- RAPdb gene ID: Os08g0485500
- Gene Symbol: AL8 RAE2 GAD1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Our findings illuminate the molecular function of RAE2 in awn development and shed light on the independent domestication histories of Asian and African cultivated rice.
- The RAE2 precursor is specifically cleaved by SLP1 in the rice spikelet, where the mature RAE2 peptide subsequently induces awn elongation.
- GAD1 Encodes a Secreted Peptide That Regulates Grain Number, Grain Length and Awn Development in Rice Domestication.
- A frame-shift insertion in GAD1 destroyed the conserved cysteine residues of the peptide, resulting in a loss of function, and causing the increased number of grains per panicle, shorter grains and awnless phenotype characteristic of cultivated rice.
Function-related keywords:
Literature:
- Genome-wide association study using whole-genome sequencing rapidly identifies new genes influencing agronomic traits in rice . DOI: 10.1038/ng.3596 ; PMID: 27322545
- Loss of function at RAE2, a previously unidentified EPFL, is required for awnlessness in cultivated Asian rice . DOI: 10.1073/pnas.1604849113 ; PMID: 27466405
- GAD1 Encodes a Secreted Peptide That Regulates Grain Number, Grain Length, and Awn Development in Rice Domestication . DOI: 10.1105/tpc.16.00379 ; PMID: 27634315
- Explore the genetics of weedy traits using rice 3K database . DOI: 10.1186/s40529-020-00309-y ; PMID: 33432466
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os08g37890.1
GTCCTGCCGCCCTGGAAATTGTGCCTATGTAAAGTGTAGCCGGCCACACGTTGTTTCTTCCTTTCCTTCACATCTCACAGCCCCGTCTTGCTGCTTCCAGTCCAGCCCGCTCGCCGTCTCGCCATTTTGACCAGACCACCTCGCTGCCTCTGCTCTGCTCAGTGCTGCTCACTGCCTCACTCACACTGTCACAGTGCTCTTCTGGGTATAAGTAGCTGGGCGCGCGGCGTCACCTTCCTTGGCTGCCCGTGAGCTTCCCGCGCGCGCCATGGCACGGCCTCGTGGGCGTGGGCGAGCTTCTTGGTAGGCGAGGTGTCGCCGGCGATCGAGTTGTCTCGAGAACTCAGCTATGAGGACGGCGGCCACGCCGCCTCTCGCCGCCGCCGCCGCCGCCGTCGCGGCAGTGTTCCTCTCTGCGTTGCTGCTCGCCTCCGCCTCCGCCTCCGCCTCCAGGCTCCCTCCTCCTCGCCGTCTTCTTCCCCTGGTTGGTGGCGAGGTGGCGGTGGCGGTGGTGGCTGGGGAGGAGGAGAAGGTGCGGCTGGGGTCGAGCCCGCCGAGCTGCTACAGCAAGTGCTACGGGTGCAGCCCGTGCGTCGCGGTGCAGGTGCCCACCTTGTCCGCCCCGTCCGTCCCCGCCGCCGCCGCGCCGCGCACGACGCCGCGCCGCTCGTGGCGACGTTCACCAACTACAAGCCGCTAGGGTGGAAGTGCCAGTGCCGCGACCGCCTGTTCGACCCCTGACCCTGAGGCGCGCGCGCCCCGTGGCGCGCCGTGGCGTGGCGTGGCGCGTGCATGGCGGGGCTCGCGCTCGCGCTCTCGCTGTGAATTACGGTGTGTGTGGCCGCGTCGCGTGCCCGGCAGCACATGGCGCTGCACTGCTGCTGATGCTGGTGGTGGTGGAATCGTTGTCGTCGCGTCGGGCTGAGAGGGATTGTTGATAGATTCCGTGTAATATGCCAGGACAAAATTTTGTCACCGCTGCTGCTGCCCATGCAGCTGGATCGGCTCGGCTACTTTCACCACCTATACTGTATCTTTCACTGGCATCTGCTCGCCGTTTTGGAATCTCTGCGGTGTGGGGTTGCCTCTTGCATGTACACATGTTTTTCATGTATCGATCCATGCCTCCTCCATGGAATCTAATGGGAATCCATCATCGTTCATGCTGGATGGATGGATGGATGTAGTGAATGGTAGTTTTTCTTATTTTTGTTGGAGATGGATATTTTTTACTTTACATCTAATCGGATATATGTTGTCTTTTAAATTGAGAATTTAGCTACTCAAACAATCCATTCTGAAATTCGTTCAAACGAAGATTTGAACTTAAG
CDS Sequence
- >LOC_Os08g37890.1
ATGAGGACGGCGGCCACGCCGCCTCTCGCCGCCGCCGCCGCCGCCGTCGCGGCAGTGTTCCTCTCTGCGTTGCTGCTCGCCTCCGCCTCCGCCTCCGCCTCCAGGCTCCCTCCTCCTCGCCGTCTTCTTCCCCTGGTTGGTGGCGAGGTGGCGGTGGCGGTGGTGGCTGGGGAGGAGGAGAAGGTGCGGCTGGGGTCGAGCCCGCCGAGCTGCTACAGCAAGTGCTACGGGTGCAGCCCGTGCGTCGCGGTGCAGGTGCCCACCTTGTCCGCCCCGTCCGTCCCCGCCGCCGCCGCGCCGCGCACGACGCCGCGCCGCTCGTGGCGACGTTCACCAACTACAAGCCGCTAG
Protein Sequence
- >LOC_Os08g37890.1
MRTAATPPLAAAAAAVAAVFLSALLLASASASASRLPPPRRLLPLVGGEVAVAVVAGEEEKVRLGSSPPSCYSKCYGCSPCVAVQVPTLSAPSVPAAAAPRTTPRRSWRRSPTTSR*