Gene Details:
- MSU gene ID: LOC_Os08g32130
- RAPdb gene ID: Os08g0416900
- Gene Symbol: OsV5B
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Differential protein abundances of OsV5A and OsV5B in rice seedlings at different leaf developmental stages were also revealed.
- Deficiency of OsV5A and OsV5B occurred in pre-emerged and emerging leaves in osv5a seedlings at 22 °C, leading to reduced POR accumulation and chlorophyll content.
- OsV5A apparently developed a specialized role for regulating POR abundances at the leaf pre-emergence stage while the same function is performed by OsV5B during leaf emergence and expansion.
- Both OsV5A and OsV5B are localized in the chloroplast envelope and thylakoid membranes.
- OsV5A and OsV5B interact with two rice PORs (OsPORA and OsPORB) inside chloroplasts and they stabilize OsPORB in vitro under oxidative stress.
Function-related keywords:
- seedlings , leaf , leaf-development , chloroplast , oxidative-stress , oxidative , stress
Literature:
- Differential Regulation of Protochlorophyllide Oxidoreductase Abundances by VIRESCENT 5A (OsV5A) and VIRESCENT 5B (OsV5B) in Rice Seedlings . DOI: 10.1093/pcp/pcw151 ; PMID: 27565208
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os08g32130.2
GCCGGTCATCTCGTCTCGGCTTCGTCTGACGCTTTCGCTGCTCTATCCAATTTCCTCTTCGCTTCCCCTCCCTCTCTCCGAGCTCGCCTCCCTCCACCCCCCCCCGCCTCGCCGGAGATGCAGCAGGCGGCCGTGGCCTTCGGCCAGGCGGCCTTCCTCGCCCGCCCGCTCCGGCGCCCGCCGCACCGCCTGTACGTACGCGCGGGATGGGCGGAGGCTGGTGGCGTGGCGGCCGGACGGGGGCGCGCGTCGCTCCCGCGTCCGCGGCTCTCTGCGAGCCTCTCGATCGGCGCCGGTGGCTACGGTGATGAGCATGCTCCGTTGTTCCCAAGACAGCAAGCATGGGACCCCTACAAGATTCTTGGTGTTGATCATGATGCATCCGAAGAAGAGATCAGGAGTGCAAGGAATTTTCTTCTTAAGCAATATGCTGGGCATGAAGAGACCGAAGAGGCTATTGAAGGTGCTTATGAAAAAATAATAATGAAAAGCTACTCACACCGTAAGAAATCCAAAATTAATCTGAAAAGCAAAATACAAAAGCAAGTCGAGGAATCCCCATCATGGTTTAAGGCAATGCTTGGGTTCTTTGAGGTGCCATCAGCGGAGATTATTTCAAGAAGACTTGCTCTTTTTGCTTTTATTGCTGGGTGGAGCATTGTAACGTCCGCTGAGACTGGGCCTACTTTCCAGCTTGCACTATCACTCGTCTCATGCATATATTTCCTCAATGAAAAGATGAAAAATCTTTCCAGGGCGTCTATGACAGGGTTTGGAGTTTTTGTGGGTGGCTGGATTGTGGGATCTTTGCTTGTCCCAGTGATTCCAACATTTGCCATCCCACCTACTTGGTCCATCGAGCTCCTTTCTTCTCTTGTGGCTTATGTTTTCTTGTTCTTGGGTTGTACTTTCCTCAAGTGAAATTTCTGTTAAGAACCTGGCAACAGGGCGGCGCTATTGCTTTTTTTTTTTGGTTCCCAATCAAATCGATGCTTTTTTTCCACTCCGTAGTGAATTCATAGCTACCTTTATTCCCTTCTTTTAGGTTTGTAAGATGTATCCCTTGTTGAGAAAACAAACAGGGATATCTGTGGCGAAAAAGCGAAAACCTATGAAAATCGGAACTAAAAGTTTTCTAAATTATTGAAAAAATTACTAGAAATATGTGTAAGCATGGACTACATTCCCTTCAAATCTCTTTGTCTAAACTCAACTTTATTTGGAAGGAAAAGAAGACAAAATTTTGGTGAATAGTAGGAAGCTGGGTTTGAACTTGAGATTTGGTGGAAATGTAGTTCACACCTATACTTATCTCTAGTAAATTTTCCATGAATTTAGAAAAAAAATTCAGTTTCGGTTTTCATTTATTCAATGGTTTTCATTGGATATTCCTCCAAAAATGTAAACTAGAAACCACTATCCTGGTGGAAGCCTTGGAGTAGTTTACAATTTTTTTTATCTCATATACAAAAGGTGATATCGGATAACCATAGAAATTTTGAATATCAAACTTTTGTTTGTGATAATATTCTTTTACGTTTTGCAATTCATATGTAGGACCACGACAGTACATGGTCCGATTTTCGGTG - >LOC_Os08g32130.1
GCCGGTCATCTCGTCTCGGCTTCGTCTGACGCTTTCGCTGCTCTATCCAATTTCCTCTTCGCTTCCCCTCCCTCTCTCCGAGCTCGCCTCCCTCCACCCCCCCCCGCCTCGCCGGAGATGCAGCAGGCGGCCGTGGCCTTCGGCCAGGCGGCCTTCCTCGCCCGCCCGCTCCGGCGCCCGCCGCACCGCCTGTACGTACGCGCGGGATGGGCGGAGGCTGGTGGCGTGGCGGCCGGACGGGGGCGCGCGTCGCTCCCGCGTCCGCGGCTCTCTGCGAGCCTCTCGATCGGCGCCGGTGGCTACGGTGATGAGCATGCTCCGTTGTTCCCAAGACAGCAAGCATGGGACCCCTACAAGATTCTTGGTGTTGATCATGATGCATCCGAAGAAGAGATCAGGAGTGCAAGGAATTTTCTTCTTAAGCAATATGCTGGGCATGAAGAGACCGAAGAGGCTATTGAAGGTGCTTATGAAAAAATAATAATGAAAAGCTACTCACACCGTAAGAAATCCAAAATTAATCTGAAAAGCAAAATACAAAAGCAAGTCGAGGAATCCCCATCATGGTTTAAGGCAATGCTTGGGTTCTTTGAGGTGCCATCAGCGGAGATTATTTCAAGAAGACTTGCTCTTTTTGCTTTTATTGCTGGGTGGAGCATTGTAACGTCCGCTGAGACTGGGCCTACTTTCCAGCTTGCACTATCACTCGTCTCATGCATATATTTCCTCAATGAAAAGATGAAAAATCTTTCCAGGGCGTCTATGACAGGGTTTGGAGTTTTTGTGGGTGGCTGGATTGTGGGATCTTTGCTTGTCCCAGTGATTCCAACATTTGCCATCCCACCTACTTGGTCCATCGAGCTCCTTTCTTCTCTTGTGGCTTATGTTTTCTTGTTCTTGGGTTGTACTTTCCTCAAGTGAAATTTCTGTTAAGAACCTGGCAACAGGGCGGCGCTATTGCTTTTTTTTTTTGGTTCCCAATCAAATCGATGCTTTTTTTCCACTCCGTAGTGAATTCATAGCTACCTTTATTCCCTTCTTTTAGGTTTGTAAGATGTATCCCTTGTTGAGAAAACAAACAGGGATATCTGTGGCGAAAAAGCGAAAACCTATGAAAATCGGAACTAAAAGTTTTCTAAATTATTGAAAAAATTACTAGAAATATGTGTAAGCATGGACTACATTCCCTTCAAATCTCTTTGTCTAAACTCAACTTTATTTGGAAGGAAAAGAAGACAAAATTTTGGTGAATAGTAGGAAGCTGGGTTTGAACTTGAGATTTGGTGGAAATGTAGTTCACACCTATACTTATCTCTAGTAAATTTTCCATGAATTTAGAAAAAAAATTCAGTTTCGGTTTTCATTTATTCAATGGTTTTCATTGGATATTCCTCCAAAAATGTAAACTAGAAACCACTATCCTGGTGGAAGCCTTGGAGTAGTTTACAATTTTTTTTATCTCATATACAAAAGGTGATATCGGATAACCATAGAAATTTTGAATATCAAACTTTTGTTTGTGATAATATTCTTTTACGTTTTGCAATTCATATGTAGGACCACGACAGTACATGGTCCGATTTTCGGTG
CDS Sequence
- >LOC_Os08g32130.2
ATGCAGCAGGCGGCCGTGGCCTTCGGCCAGGCGGCCTTCCTCGCCCGCCCGCTCCGGCGCCCGCCGCACCGCCTGTACGTACGCGCGGGATGGGCGGAGGCTGGTGGCGTGGCGGCCGGACGGGGGCGCGCGTCGCTCCCGCGTCCGCGGCTCTCTGCGAGCCTCTCGATCGGCGCCGGTGGCTACGGTGATGAGCATGCTCCGTTGTTCCCAAGACAGCAAGCATGGGACCCCTACAAGATTCTTGGTGTTGATCATGATGCATCCGAAGAAGAGATCAGGAGTGCAAGGAATTTTCTTCTTAAGCAATATGCTGGGCATGAAGAGACCGAAGAGGCTATTGAAGGTGCTTATGAAAAAATAATAATGAAAAGCTACTCACACCGTAAGAAATCCAAAATTAATCTGAAAAGCAAAATACAAAAGCAAGTCGAGGAATCCCCATCATGGTTTAAGGCAATGCTTGGGTTCTTTGAGGTGCCATCAGCGGAGATTATTTCAAGAAGACTTGCTCTTTTTGCTTTTATTGCTGGGTGGAGCATTGTAACGTCCGCTGAGACTGGGCCTACTTTCCAGCTTGCACTATCACTCGTCTCATGCATATATTTCCTCAATGAAAAGATGAAAAATCTTTCCAGGGCGTCTATGACAGGGTTTGGAGTTTTTGTGGGTGGCTGGATTGTGGGATCTTTGCTTGTCCCAGTGATTCCAACATTTGCCATCCCACCTACTTGGTCCATCGAGCTCCTTTCTTCTCTTGTGGCTTATGTTTTCTTGTTCTTGGGTTGTACTTTCCTCAAGTGA - >LOC_Os08g32130.1
ATGCAGCAGGCGGCCGTGGCCTTCGGCCAGGCGGCCTTCCTCGCCCGCCCGCTCCGGCGCCCGCCGCACCGCCTGTACGTACGCGCGGGATGGGCGGAGGCTGGTGGCGTGGCGGCCGGACGGGGGCGCGCGTCGCTCCCGCGTCCGCGGCTCTCTGCGAGCCTCTCGATCGGCGCCGGTGGCTACGGTGATGAGCATGCTCCGTTGTTCCCAAGACAGCAAGCATGGGACCCCTACAAGATTCTTGGTGTTGATCATGATGCATCCGAAGAAGAGATCAGGAGTGCAAGGAATTTTCTTCTTAAGCAATATGCTGGGCATGAAGAGACCGAAGAGGCTATTGAAGGTGCTTATGAAAAAATAATAATGAAAAGCTACTCACACCGTAAGAAATCCAAAATTAATCTGAAAAGCAAAATACAAAAGCAAGTCGAGGAATCCCCATCATGGTTTAAGGCAATGCTTGGGTTCTTTGAGGTGCCATCAGCGGAGATTATTTCAAGAAGACTTGCTCTTTTTGCTTTTATTGCTGGGTGGAGCATTGTAACGTCCGCTGAGACTGGGCCTACTTTCCAGCTTGCACTATCACTCGTCTCATGCATATATTTCCTCAATGAAAAGATGAAAAATCTTTCCAGGGCGTCTATGACAGGGTTTGGAGTTTTTGTGGGTGGCTGGATTGTGGGATCTTTGCTTGTCCCAGTGATTCCAACATTTGCCATCCCACCTACTTGGTCCATCGAGCTCCTTTCTTCTCTTGTGGCTTATGTTTTCTTGTTCTTGGGTTGTACTTTCCTCAAGTGA
Protein Sequence
- >LOC_Os08g32130.2
MQQAAVAFGQAAFLARPLRRPPHRLYVRAGWAEAGGVAAGRGRASLPRPRLSASLSIGAGGYGDEHAPLFPRQQAWDPYKILGVDHDASEEEIRSARNFLLKQYAGHEETEEAIEGAYEKIIMKSYSHRKKSKINLKSKIQKQVEESPSWFKAMLGFFEVPSAEIISRRLALFAFIAGWSIVTSAETGPTFQLALSLVSCIYFLNEKMKNLSRASMTGFGVFVGGWIVGSLLVPVIPTFAIPPTWSIELLSSLVAYVFLFLGCTFLK* - >LOC_Os08g32130.1
MQQAAVAFGQAAFLARPLRRPPHRLYVRAGWAEAGGVAAGRGRASLPRPRLSASLSIGAGGYGDEHAPLFPRQQAWDPYKILGVDHDASEEEIRSARNFLLKQYAGHEETEEAIEGAYEKIIMKSYSHRKKSKINLKSKIQKQVEESPSWFKAMLGFFEVPSAEIISRRLALFAFIAGWSIVTSAETGPTFQLALSLVSCIYFLNEKMKNLSRASMTGFGVFVGGWIVGSLLVPVIPTFAIPPTWSIELLSSLVAYVFLFLGCTFLK*