Gene Details:
- MSU gene ID: LOC_Os08g31870
- RAPdb gene ID: Os08g0413000
- Gene Symbol: OsSTL2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Twenty-one QTLs were identified and two candidate genes named OsSTL1 (Oryza sativa salt tolerance level 1) and OsSTL2 (Oryza sativa salt tolerance level 2) were confirmed using sequence analysis.
Function-related keywords:
Literature:
- Genetic basis and identification of candidate genes for salt tolerance in rice by GWAS . DOI: 10.1038/s41598-020-66604-7 ; PMID: 32561778
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os08g31870.1
ATGGCCGACGCCGACGTCTCTTCCTCCAAGACGACGACGGCGAGGGATTACAGCACGGCGATCCTGGAGTGCGCCAAGAAGAAGTCCCCGAACCGGCTGATGGCGGACGACGCCGAGGGCGGGGTGGCCGTCGACAACTCCACGGTGACGCTCAGCGAGGCGACCATGGAGGAGCTCGGCATCTTCCGCGGCGACCTGGTGACCCTCCGCGGGAGGCGGCGCCGCGAGGCCGTCTGCTACGCGCAGAAGGACGAGTCGTGCCCCGACGGCCGCCTCCGCCTCAGCCGCGGCGTCCGCAGCAACCTCCACGTCCGCCTCGGCGACCTCGTCACCGTCAAGCCGTGCCCCACCATTAGGAACGCCAAGAGGGTGCAGCTCCGCCCCTTCGACGACTCTGTCGAGGGCATCTCCGGTGATCTGTTCGAGCCCTACCTCAAACCGTACTTCATGGATGCGTTGCGGCCGGTGAAGAAGGGCGACCGGTTCCTGGTGCGCGGCCACATGCACGCCGTGGAGTTCAAGGTGATGGACACGGAGCCGAACAACGAGCCCGTGATCGTGGCGGGCGACACGGAGATCTTCTGCGACGAGGGCGACCCGGTGAAGCGCGAGGACGAGGAGCGGCTCGACGGGCCGGGCTACGACGACGTCGGCGGCGTCCGCAAGCAGCTGGCGCAGATCAGGGAGCTCGTCGAGCTGCCCCTGCGCCACCCCAAGCTGTTCCAGACGCTCGGCGTGCGCCCGCCCAAGGGCATCCTCCTCTACGGGCCCCCCGGCACCGGCAAGACGCTGCTTGCGCGCGCCATCGCCGCCGAGTCCGGCGCCCACTTCGTCGTCGTCAACGGGCCGGAGATCATGTCCGGGATGCCCGGCGAGAGCGAGGCCAACCTGCGCGCCGTGTTCGCCGAGGCGGACGCCGCGGCGCCGTCCATCGTGTTCATGGACGAGATCGACTCCATCGCGCCCAGCCGCGAGAAGGCGCACGGCGAGGTGGAGCGCCGCGTCGTGTCGCAGCTGCTCACGCTCATGGACGGCCTCCGCCCGCGGGCCCAGGTGATCGTCATCGGCGCCACCAACCGCCCCAACAGCCTCGACCCGGCGCTCCGCCGCTTCGGCCGCTTCGACCGCGAGCTCGACATCGGCGTCCCCGACGAGCTCGGCCGCCTCGAGATCCTCCGCATCCACACCAAGAACATGCCGCTCTCCGACGACGTCGACCTCGAGCGCGTCGGCAAGGACACCCACGGGTTCGTCGGCTCCGACCTCGCCTCGCTCTGCTCCGAGGCCGCCATGCAGTGCATCCGGGAGAAGCTGGACATCATCGACATCGAGAACGACACCATCGACGTGGAGATCCTCAACTCGCTGACCGTCACCATGGACCACCTCAAGTTCGCCATGGAGGTCACCAAGCCCTCCGCCCTGCGCGAGACCGGGATCGTCGAGGTGCCCAAGGTGTCGTGGGACGACATCGGCGGCCTGGGCGAGGTCAAGCGCGAGCTCCAGGAGACGGTGCAGTACCCGGTGGAGCACCCGGAGATGTTCGACCTGTTTGGCATGTCGCCGTCGCGCGGCGTGCTCTTCTACGGCCCGCCGGGGTGCGGCAAGACGATGATGGCCAAGGCCATCGCCAAGGAGTGCAAGGCCAACTTCATCAGCATCAAGGGGCCCGAGCTGCTCACCATGTGGTTCGGCGAGAGCGAGGGCAACGTCCGCAACCTGTTCGACAAGGCGCGGCAGTCGGCGCCGTGCATCCTCTTCTTCGACGAGCTCGACTCCATCGCCGTCAAGCGCGGCAACAGCGTCGGCGACGCCGGCGGCACGCCGGACCGCGTGCTCAACCAGCTGCTCACCGAGATGGACGGCATCAACGCCAAGAAGACGGTGTTCGTCATCGGCGCCACCAACCGGCCGGACATCATCGACCCGGCGATGCTCCGGCCGGGCCGCCTCGACCAGCTCATCTACATCCCGCTCCCGGACGCCTCGTCGCGGCTGGAGATCTTCAGGGCGAACCTCCGCAAGGCGCCCATGTCCCGCCACGTCGACCTGCCGGCCATGGCCGCCTCCACCGACGGGTTCAGCGGCGCCGACATCAAGGAGATCTGCCAGCGCGCGTGCAAGCTCGCGGTGCGCGAGGTGGTCCAGAAGAGCACCCTGGTCGGGAAGGCCCTGGCAATGGCGGGCGCGGAGCTCACCGTGGACCACTTCAAGAGCGCCATGAAGCACGCAAGGAAGAGCGTCAGCGAGCTCGACGTCATCAAGTACGAGTACTTCAAGCACAAGTTCAGCGGCGGCATCCCCGACGAGGAGGAGGCGCCGGCGACGGAGCCGGAGCTGCCGGTGGGACAGCTGAGGTTGGTGGCGAAGCCGAAGACGAAGACGAAGGCGGAGCTAGAAGCAGAGGCGGAGGCTGCGGCAAAAGCGAAGGCGGAGGCAGAGGCGAAGGCGAAAGCAAAGCTGAAGGGGAAGGCGGTGGCCGTGGATGACGACGACGACGACTCTACGTACTCCATGGATTCGATGGACGAGGACTTGCTGTATTAGTTAACTATACTATTAGCTAGGTTCACTCAGCTTTAGGTTTATGCCCTGCTAGATCCACTGAATTGTTCAGCCAAGAGCTAAGGAGTCTTATATTTTCCTCTCTTTGGTCTAGTTGAGTTTTATGCTCGACTTGTCTCATCGTTACCATTTATAGGATCCACTGAATTGTATAGCCAAGGTCTAAGAAGTCTTAGGTCCCTATCGTTTAGCTTTTTCCCTAATAAAAACGGTTTATTAGAAAATAAAAATAAATTTATAGGTAAATTTTTTATATA
CDS Sequence
- >LOC_Os08g31870.1
ATGGCCGACGCCGACGTCTCTTCCTCCAAGACGACGACGGCGAGGGATTACAGCACGGCGATCCTGGAGTGCGCCAAGAAGAAGTCCCCGAACCGGCTGATGGCGGACGACGCCGAGGGCGGGGTGGCCGTCGACAACTCCACGGTGACGCTCAGCGAGGCGACCATGGAGGAGCTCGGCATCTTCCGCGGCGACCTGGTGACCCTCCGCGGGAGGCGGCGCCGCGAGGCCGTCTGCTACGCGCAGAAGGACGAGTCGTGCCCCGACGGCCGCCTCCGCCTCAGCCGCGGCGTCCGCAGCAACCTCCACGTCCGCCTCGGCGACCTCGTCACCGTCAAGCCGTGCCCCACCATTAGGAACGCCAAGAGGGTGCAGCTCCGCCCCTTCGACGACTCTGTCGAGGGCATCTCCGGTGATCTGTTCGAGCCCTACCTCAAACCGTACTTCATGGATGCGTTGCGGCCGGTGAAGAAGGGCGACCGGTTCCTGGTGCGCGGCCACATGCACGCCGTGGAGTTCAAGGTGATGGACACGGAGCCGAACAACGAGCCCGTGATCGTGGCGGGCGACACGGAGATCTTCTGCGACGAGGGCGACCCGGTGAAGCGCGAGGACGAGGAGCGGCTCGACGGGCCGGGCTACGACGACGTCGGCGGCGTCCGCAAGCAGCTGGCGCAGATCAGGGAGCTCGTCGAGCTGCCCCTGCGCCACCCCAAGCTGTTCCAGACGCTCGGCGTGCGCCCGCCCAAGGGCATCCTCCTCTACGGGCCCCCCGGCACCGGCAAGACGCTGCTTGCGCGCGCCATCGCCGCCGAGTCCGGCGCCCACTTCGTCGTCGTCAACGGGCCGGAGATCATGTCCGGGATGCCCGGCGAGAGCGAGGCCAACCTGCGCGCCGTGTTCGCCGAGGCGGACGCCGCGGCGCCGTCCATCGTGTTCATGGACGAGATCGACTCCATCGCGCCCAGCCGCGAGAAGGCGCACGGCGAGGTGGAGCGCCGCGTCGTGTCGCAGCTGCTCACGCTCATGGACGGCCTCCGCCCGCGGGCCCAGGTGATCGTCATCGGCGCCACCAACCGCCCCAACAGCCTCGACCCGGCGCTCCGCCGCTTCGGCCGCTTCGACCGCGAGCTCGACATCGGCGTCCCCGACGAGCTCGGCCGCCTCGAGATCCTCCGCATCCACACCAAGAACATGCCGCTCTCCGACGACGTCGACCTCGAGCGCGTCGGCAAGGACACCCACGGGTTCGTCGGCTCCGACCTCGCCTCGCTCTGCTCCGAGGCCGCCATGCAGTGCATCCGGGAGAAGCTGGACATCATCGACATCGAGAACGACACCATCGACGTGGAGATCCTCAACTCGCTGACCGTCACCATGGACCACCTCAAGTTCGCCATGGAGGTCACCAAGCCCTCCGCCCTGCGCGAGACCGGGATCGTCGAGGTGCCCAAGGTGTCGTGGGACGACATCGGCGGCCTGGGCGAGGTCAAGCGCGAGCTCCAGGAGACGGTGCAGTACCCGGTGGAGCACCCGGAGATGTTCGACCTGTTTGGCATGTCGCCGTCGCGCGGCGTGCTCTTCTACGGCCCGCCGGGGTGCGGCAAGACGATGATGGCCAAGGCCATCGCCAAGGAGTGCAAGGCCAACTTCATCAGCATCAAGGGGCCCGAGCTGCTCACCATGTGGTTCGGCGAGAGCGAGGGCAACGTCCGCAACCTGTTCGACAAGGCGCGGCAGTCGGCGCCGTGCATCCTCTTCTTCGACGAGCTCGACTCCATCGCCGTCAAGCGCGGCAACAGCGTCGGCGACGCCGGCGGCACGCCGGACCGCGTGCTCAACCAGCTGCTCACCGAGATGGACGGCATCAACGCCAAGAAGACGGTGTTCGTCATCGGCGCCACCAACCGGCCGGACATCATCGACCCGGCGATGCTCCGGCCGGGCCGCCTCGACCAGCTCATCTACATCCCGCTCCCGGACGCCTCGTCGCGGCTGGAGATCTTCAGGGCGAACCTCCGCAAGGCGCCCATGTCCCGCCACGTCGACCTGCCGGCCATGGCCGCCTCCACCGACGGGTTCAGCGGCGCCGACATCAAGGAGATCTGCCAGCGCGCGTGCAAGCTCGCGGTGCGCGAGGTGGTCCAGAAGAGCACCCTGGTCGGGAAGGCCCTGGCAATGGCGGGCGCGGAGCTCACCGTGGACCACTTCAAGAGCGCCATGAAGCACGCAAGGAAGAGCGTCAGCGAGCTCGACGTCATCAAGTACGAGTACTTCAAGCACAAGTTCAGCGGCGGCATCCCCGACGAGGAGGAGGCGCCGGCGACGGAGCCGGAGCTGCCGGTGGGACAGCTGAGGTTGGTGGCGAAGCCGAAGACGAAGACGAAGGCGGAGCTAGAAGCAGAGGCGGAGGCTGCGGCAAAAGCGAAGGCGGAGGCAGAGGCGAAGGCGAAAGCAAAGCTGAAGGGGAAGGCGGTGGCCGTGGATGACGACGACGACGACTCTACGTACTCCATGGATTCGATGGACGAGGACTTGCTGTATTAG
Protein Sequence
- >LOC_Os08g31870.1
MADADVSSSKTTTARDYSTAILECAKKKSPNRLMADDAEGGVAVDNSTVTLSEATMEELGIFRGDLVTLRGRRRREAVCYAQKDESCPDGRLRLSRGVRSNLHVRLGDLVTVKPCPTIRNAKRVQLRPFDDSVEGISGDLFEPYLKPYFMDALRPVKKGDRFLVRGHMHAVEFKVMDTEPNNEPVIVAGDTEIFCDEGDPVKREDEERLDGPGYDDVGGVRKQLAQIRELVELPLRHPKLFQTLGVRPPKGILLYGPPGTGKTLLARAIAAESGAHFVVVNGPEIMSGMPGESEANLRAVFAEADAAAPSIVFMDEIDSIAPSREKAHGEVERRVVSQLLTLMDGLRPRAQVIVIGATNRPNSLDPALRRFGRFDRELDIGVPDELGRLEILRIHTKNMPLSDDVDLERVGKDTHGFVGSDLASLCSEAAMQCIREKLDIIDIENDTIDVEILNSLTVTMDHLKFAMEVTKPSALRETGIVEVPKVSWDDIGGLGEVKRELQETVQYPVEHPEMFDLFGMSPSRGVLFYGPPGCGKTMMAKAIAKECKANFISIKGPELLTMWFGESEGNVRNLFDKARQSAPCILFFDELDSIAVKRGNSVGDAGGTPDRVLNQLLTEMDGINAKKTVFVIGATNRPDIIDPAMLRPGRLDQLIYIPLPDASSRLEIFRANLRKAPMSRHVDLPAMAASTDGFSGADIKEICQRACKLAVREVVQKSTLVGKALAMAGAELTVDHFKSAMKHARKSVSELDVIKYEYFKHKFSGGIPDEEEAPATEPELPVGQLRLVAKPKTKTKAELEAEAEAAAKAKAEAEAKAKAKLKGKAVAVDDDDDDSTYSMDSMDEDLLY*