Information report for OsYchF1
Gene Details
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Functional Descriptions
- The finding that OsYchF1 and OsGAP1 are involved in plant defense response might shed light on the functional roles of YchF homologues in plants.
- Mutation of the noncanonical G4 motif of the OsYchF1 to the canonical sequence for GTP specificity precludes the binding/hydrolysis of ATP and prevents OsYchF1 from functioning as a negative regulator of plant-defense responses, while retaining its ability to bind/hydrolyze GTP and its function as a negative regulator of abiotic stress responses, demonstrating the specific role of ATP-binding/hydrolysis in disease resistance.
- ATP binding by the P-loop NTPase OsYchF1 (an unconventional G protein) contributes to biotic but not abiotic stress responses.
Functional Keywords
Literature and News
- An ancient P-loop GTPase in rice is regulated by a higher plant-specific regulatory protein . DOI: 10.1074/jbc.M110.172080 ; PMID: 20876569
- ATP binding by the P-loop NTPase OsYchF1 (an unconventional G protein) contributes to biotic but not abiotic stress responses . DOI: 10.1073/pnas.1522966113 ; PMID: 26912459
Gene Resources
- UniProt: Q6Z1J6
- EMBL: AK062256, AK098917, AP005416
- AlphaFoldDB: Q6Z1J6
- EnsemblPlants: Os08t0199300-01
- Gramene: Os08t0199300-01
- KEGG: dosa:Os08g0199300
- Orthologous matrix: DFHDLCE
- InterPro: IPR004095, IPR004396, IPR006073
- PANTHER: PTHR23305, PTHR23305:SF11
- SUPFAM: SSF52540, SSF81271
- PROSITE: PS51710, PS51880
- Gene3D: 1.10.150.300, 3.10.20.30, 3.40.50.300
- OrthoDB: Q6Z1J6
- SWISS-MODEL: Q6Z1J6
- Conserved Domain Database: cd01900, cd04867
- eggNOG: KOG1491
Homologs
- Daucus carota: DCAR_003850
- Nicotiana attenuata: A4A49_04638
- Prunus avium: Pav_sc0000637.1_g090.1.mk
- Ricinus communis: 29977.t000013
Sequences
cDNA Sequence
- >LOC_Os08g09940.1
CCCTTCTTCTTCCCTCACCCCCTTTTCCCACCAAAAACCCTAGCCTCCCCCTCCTCTTCCAGATTCATCGCCGCCGCGCCGCCCCGAGCCCAGAGTAGCCGGCGACGATGCCGCCCAAGGCGTCCAAGAAGGACGCCGCCCCCGCCGAGCGCCCCATCCTCGGCCGCTTCTCCTCCCACCTCAAGATCGGGATCGTTGGGTTACCAAATGTTGGCAAATCCACTTTCTTTAACATAGTAACAAAGCTGTCTATCCCAGCTGAGAACTTCCCTTTCTGTACCATCGACCCAAATGAGGCACGGGTATATGTTCCAGATGAGAGATTTGATTGGCTTTGTCAACTTTACAAGCCAAAGAGTGAGGTGTCTGCATATCTAGAAATCAATGACATAGCCGGGCTTGTTAGAGGAGCCCATGCTGGGGAGGGTTTGGGCAATGCCTTCCTATCCCATATACGCGCTGTTGATGGAATTTTTCATGTATTGAGAGCATTTGAAGACAAAGAAGTTACTCATATTGATGATTCAGTGGATCCTGTTAGAGATTTGGAAACTATTGGTGAAGAGCTGAGACTCAAGGACATTGAGTTTGTGCAGAACAAAATTGATGACCTTGAGAAATCAATGAAGAGAAGCAATGATAAGCAGCTGAAACTCGAGCATGAATTATGTGAGAAGGTCAAAGCCCATCTTGAAGATGGAAAGGATGTCCGCTTTGGAGATTGGAAAAGTGCTGACATTGAGATCTTGAATACCTTCCAGCTACTTACAGCTAAGCCAGTTGTCTATTTGGTGAACATGAGTGAGAAGGACTACCAGAGGAAAAAGAACAAGTTCCTACCTAAGATACATGCCTGGGTTCAGGAACATGGTGGTGAAACTATTATTCCTTTTAGCTGTGCTTTTGAAAGGTTGCTAGCGGATATGCCCCCGGATGAAGCTGCTAAATATTGTGCTGAAAACCAGATTGCAAGTGTGATCCCAAAAATTATCAAGACTGGTTTTGCAGCAATCCATCTTATATACTTTTTCACTGCTGGCCCTGACGAGGTAAAGTGTTGGCAGATCAGACGTCAAACTAAAGCACCTCAAGCTGCTGGTACAATTCACACTGATTTTGAGAGAGGCTTCATATGCGCTGAGGTAATGAAGTTCGACGATCTAAAAGAACTGGGTAGTGAATCTGCTGTGAAGGCTGCTGGAAAATACAGGCAGGAAGGGAAGACCTACGTGGTACAGGACGGGGATATCATCTTCTTTAAATTTAACGTGTCTGGAGGTGGAAAGAAGTGAGTCAATGTTTGAAGGTGATAGCGTTCCGACAGAGTGGTGCATTTTACTTTAAACTTCTACACTTAGCTCTGTAGCAATAAACAAGTTATGATTCGATATTTTGTACCATGAGGCTATAAAATTATCCAAGGATTGTATGATGAGGCTTTAAATCATTGAAGAAAAAGTGTACGGTTTTGCAATACAAGCATTCTTGGCATGTTTGTCTTGCCTGGGTCTACATCTGTAATATTAATGGATAACTGCCGTGCATGTTTGGACAACTCGCTGTCATGCAGTCAAATGTGGTTCTTTCCCCACGGTAAAATTAGAGCCTTCCACGTACAGCTGATTTCTGCAATTCTATTTTTAAGCCATGCATAAACAGACACAAATTAACAATTAACTGGAATAGCAAGTCTTACCACGCATACAATTACCAGAGCAAGATAACCCTACGAATTACTGCTCAAATCTAGCGGACCTCTACTTCTGGTAACGGCCCGTTTATGAAATATGAACACGAGCATAGCATAATTAATTACCCTTCCAGTGGGTAATTAAATCAACTTAATTAAATTAGGGCAGCATGACACTGACGTGCCTATCAAATATCCAATTAATCGGGATGCTGATGGGCTTCTTCTGGGCCTTGACCGCCCTCTCATGGGCCTTCTCCTTCATCCTCCGGATCTTCTGCGGCAGCTCGCACACGTAGTCCCGCGCGCGCCGCCCTTCGCCGGAGAGCCCCGCCGCGAGCTCCTCCACGCGCCACTCCCGCACCAGGTGCTCGACGATGGAGCAGTAGTCCGACACCGTGTACGTCCCGGCCTGCTCGGCGAGGGACACGACGCAGGCGTAGAGGTCGTCGCGGCGGCCGTCGGAGATGGGCGAGGTCGGCATGGCGACCCCTCGCCGTAGCATGCGCGCCACCGCGCGCACGCCGGCGTCCGGGTCGGCCTCGAGGAGCCTGGAGACGAT
CDS Sequence
- >LOC_Os08g09940.1
ATGCCGCCCAAGGCGTCCAAGAAGGACGCCGCCCCCGCCGAGCGCCCCATCCTCGGCCGCTTCTCCTCCCACCTCAAGATCGGGATCGTTGGGTTACCAAATGTTGGCAAATCCACTTTCTTTAACATAGTAACAAAGCTGTCTATCCCAGCTGAGAACTTCCCTTTCTGTACCATCGACCCAAATGAGGCACGGGTATATGTTCCAGATGAGAGATTTGATTGGCTTTGTCAACTTTACAAGCCAAAGAGTGAGGTGTCTGCATATCTAGAAATCAATGACATAGCCGGGCTTGTTAGAGGAGCCCATGCTGGGGAGGGTTTGGGCAATGCCTTCCTATCCCATATACGCGCTGTTGATGGAATTTTTCATGTATTGAGAGCATTTGAAGACAAAGAAGTTACTCATATTGATGATTCAGTGGATCCTGTTAGAGATTTGGAAACTATTGGTGAAGAGCTGAGACTCAAGGACATTGAGTTTGTGCAGAACAAAATTGATGACCTTGAGAAATCAATGAAGAGAAGCAATGATAAGCAGCTGAAACTCGAGCATGAATTATGTGAGAAGGTCAAAGCCCATCTTGAAGATGGAAAGGATGTCCGCTTTGGAGATTGGAAAAGTGCTGACATTGAGATCTTGAATACCTTCCAGCTACTTACAGCTAAGCCAGTTGTCTATTTGGTGAACATGAGTGAGAAGGACTACCAGAGGAAAAAGAACAAGTTCCTACCTAAGATACATGCCTGGGTTCAGGAACATGGTGGTGAAACTATTATTCCTTTTAGCTGTGCTTTTGAAAGGTTGCTAGCGGATATGCCCCCGGATGAAGCTGCTAAATATTGTGCTGAAAACCAGATTGCAAGTGTGATCCCAAAAATTATCAAGACTGGTTTTGCAGCAATCCATCTTATATACTTTTTCACTGCTGGCCCTGACGAGGTAAAGTGTTGGCAGATCAGACGTCAAACTAAAGCACCTCAAGCTGCTGGTACAATTCACACTGATTTTGAGAGAGGCTTCATATGCGCTGAGGTAATGAAGTTCGACGATCTAAAAGAACTGGGTAGTGAATCTGCTGTGAAGGCTGCTGGAAAATACAGGCAGGAAGGGAAGACCTACGTGGTACAGGACGGGGATATCATCTTCTTTAAATTTAACGTGTCTGGAGGTGGAAAGAAGTGA
Protein Sequence
- >LOC_Os08g09940.1
MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK*