Gene Details:
- MSU gene ID: LOC_Os08g09940
- RAPdb gene ID: Os08g0199300
- Gene Symbol: OsYchF1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The finding that OsYchF1 and OsGAP1 are involved in plant defense response might shed light on the functional roles of YchF homologues in plants.
- Mutation of the noncanonical G4 motif of the OsYchF1 to the canonical sequence for GTP specificity precludes the binding/hydrolysis of ATP and prevents OsYchF1 from functioning as a negative regulator of plant-defense responses, while retaining its ability to bind/hydrolyze GTP and its function as a negative regulator of abiotic stress responses, demonstrating the specific role of ATP-binding/hydrolysis in disease resistance.
- ATP binding by the P-loop NTPase OsYchF1 (an unconventional G protein) contributes to biotic but not abiotic stress responses.
Function-related keywords:
- defense , defense-response , resistance , abiotic-stress , disease , disease-resistance , stress , biotic-stress , stress-response
Literature:
- An ancient P-loop GTPase in rice is regulated by a higher plant-specific regulatory protein . DOI: 10.1074/jbc.M110.172080 ; PMID: 20876569
- ATP binding by the P-loop NTPase OsYchF1 (an unconventional G protein) contributes to biotic but not abiotic stress responses . DOI: 10.1073/pnas.1522966113 ; PMID: 26912459
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os08g09940.1
CCCTTCTTCTTCCCTCACCCCCTTTTCCCACCAAAAACCCTAGCCTCCCCCTCCTCTTCCAGATTCATCGCCGCCGCGCCGCCCCGAGCCCAGAGTAGCCGGCGACGATGCCGCCCAAGGCGTCCAAGAAGGACGCCGCCCCCGCCGAGCGCCCCATCCTCGGCCGCTTCTCCTCCCACCTCAAGATCGGGATCGTTGGGTTACCAAATGTTGGCAAATCCACTTTCTTTAACATAGTAACAAAGCTGTCTATCCCAGCTGAGAACTTCCCTTTCTGTACCATCGACCCAAATGAGGCACGGGTATATGTTCCAGATGAGAGATTTGATTGGCTTTGTCAACTTTACAAGCCAAAGAGTGAGGTGTCTGCATATCTAGAAATCAATGACATAGCCGGGCTTGTTAGAGGAGCCCATGCTGGGGAGGGTTTGGGCAATGCCTTCCTATCCCATATACGCGCTGTTGATGGAATTTTTCATGTATTGAGAGCATTTGAAGACAAAGAAGTTACTCATATTGATGATTCAGTGGATCCTGTTAGAGATTTGGAAACTATTGGTGAAGAGCTGAGACTCAAGGACATTGAGTTTGTGCAGAACAAAATTGATGACCTTGAGAAATCAATGAAGAGAAGCAATGATAAGCAGCTGAAACTCGAGCATGAATTATGTGAGAAGGTCAAAGCCCATCTTGAAGATGGAAAGGATGTCCGCTTTGGAGATTGGAAAAGTGCTGACATTGAGATCTTGAATACCTTCCAGCTACTTACAGCTAAGCCAGTTGTCTATTTGGTGAACATGAGTGAGAAGGACTACCAGAGGAAAAAGAACAAGTTCCTACCTAAGATACATGCCTGGGTTCAGGAACATGGTGGTGAAACTATTATTCCTTTTAGCTGTGCTTTTGAAAGGTTGCTAGCGGATATGCCCCCGGATGAAGCTGCTAAATATTGTGCTGAAAACCAGATTGCAAGTGTGATCCCAAAAATTATCAAGACTGGTTTTGCAGCAATCCATCTTATATACTTTTTCACTGCTGGCCCTGACGAGGTAAAGTGTTGGCAGATCAGACGTCAAACTAAAGCACCTCAAGCTGCTGGTACAATTCACACTGATTTTGAGAGAGGCTTCATATGCGCTGAGGTAATGAAGTTCGACGATCTAAAAGAACTGGGTAGTGAATCTGCTGTGAAGGCTGCTGGAAAATACAGGCAGGAAGGGAAGACCTACGTGGTACAGGACGGGGATATCATCTTCTTTAAATTTAACGTGTCTGGAGGTGGAAAGAAGTGAGTCAATGTTTGAAGGTGATAGCGTTCCGACAGAGTGGTGCATTTTACTTTAAACTTCTACACTTAGCTCTGTAGCAATAAACAAGTTATGATTCGATATTTTGTACCATGAGGCTATAAAATTATCCAAGGATTGTATGATGAGGCTTTAAATCATTGAAGAAAAAGTGTACGGTTTTGCAATACAAGCATTCTTGGCATGTTTGTCTTGCCTGGGTCTACATCTGTAATATTAATGGATAACTGCCGTGCATGTTTGGACAACTCGCTGTCATGCAGTCAAATGTGGTTCTTTCCCCACGGTAAAATTAGAGCCTTCCACGTACAGCTGATTTCTGCAATTCTATTTTTAAGCCATGCATAAACAGACACAAATTAACAATTAACTGGAATAGCAAGTCTTACCACGCATACAATTACCAGAGCAAGATAACCCTACGAATTACTGCTCAAATCTAGCGGACCTCTACTTCTGGTAACGGCCCGTTTATGAAATATGAACACGAGCATAGCATAATTAATTACCCTTCCAGTGGGTAATTAAATCAACTTAATTAAATTAGGGCAGCATGACACTGACGTGCCTATCAAATATCCAATTAATCGGGATGCTGATGGGCTTCTTCTGGGCCTTGACCGCCCTCTCATGGGCCTTCTCCTTCATCCTCCGGATCTTCTGCGGCAGCTCGCACACGTAGTCCCGCGCGCGCCGCCCTTCGCCGGAGAGCCCCGCCGCGAGCTCCTCCACGCGCCACTCCCGCACCAGGTGCTCGACGATGGAGCAGTAGTCCGACACCGTGTACGTCCCGGCCTGCTCGGCGAGGGACACGACGCAGGCGTAGAGGTCGTCGCGGCGGCCGTCGGAGATGGGCGAGGTCGGCATGGCGACCCCTCGCCGTAGCATGCGCGCCACCGCGCGCACGCCGGCGTCCGGGTCGGCCTCGAGGAGCCTGGAGACGAT
CDS Sequence
- >LOC_Os08g09940.1
ATGCCGCCCAAGGCGTCCAAGAAGGACGCCGCCCCCGCCGAGCGCCCCATCCTCGGCCGCTTCTCCTCCCACCTCAAGATCGGGATCGTTGGGTTACCAAATGTTGGCAAATCCACTTTCTTTAACATAGTAACAAAGCTGTCTATCCCAGCTGAGAACTTCCCTTTCTGTACCATCGACCCAAATGAGGCACGGGTATATGTTCCAGATGAGAGATTTGATTGGCTTTGTCAACTTTACAAGCCAAAGAGTGAGGTGTCTGCATATCTAGAAATCAATGACATAGCCGGGCTTGTTAGAGGAGCCCATGCTGGGGAGGGTTTGGGCAATGCCTTCCTATCCCATATACGCGCTGTTGATGGAATTTTTCATGTATTGAGAGCATTTGAAGACAAAGAAGTTACTCATATTGATGATTCAGTGGATCCTGTTAGAGATTTGGAAACTATTGGTGAAGAGCTGAGACTCAAGGACATTGAGTTTGTGCAGAACAAAATTGATGACCTTGAGAAATCAATGAAGAGAAGCAATGATAAGCAGCTGAAACTCGAGCATGAATTATGTGAGAAGGTCAAAGCCCATCTTGAAGATGGAAAGGATGTCCGCTTTGGAGATTGGAAAAGTGCTGACATTGAGATCTTGAATACCTTCCAGCTACTTACAGCTAAGCCAGTTGTCTATTTGGTGAACATGAGTGAGAAGGACTACCAGAGGAAAAAGAACAAGTTCCTACCTAAGATACATGCCTGGGTTCAGGAACATGGTGGTGAAACTATTATTCCTTTTAGCTGTGCTTTTGAAAGGTTGCTAGCGGATATGCCCCCGGATGAAGCTGCTAAATATTGTGCTGAAAACCAGATTGCAAGTGTGATCCCAAAAATTATCAAGACTGGTTTTGCAGCAATCCATCTTATATACTTTTTCACTGCTGGCCCTGACGAGGTAAAGTGTTGGCAGATCAGACGTCAAACTAAAGCACCTCAAGCTGCTGGTACAATTCACACTGATTTTGAGAGAGGCTTCATATGCGCTGAGGTAATGAAGTTCGACGATCTAAAAGAACTGGGTAGTGAATCTGCTGTGAAGGCTGCTGGAAAATACAGGCAGGAAGGGAAGACCTACGTGGTACAGGACGGGGATATCATCTTCTTTAAATTTAACGTGTCTGGAGGTGGAAAGAAGTGA
Protein Sequence
- >LOC_Os08g09940.1
MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK*