Information report for PSS1
Gene Details
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Functional Descriptions
- Together, our results suggest that PSS1 defines a novel member of the kinesin-1 family essential for male meiotic chromosomal dynamics, male gametogenesis, and anther dehiscence in rice.
- In this report, we found the female gamete of W207-2 was normal, and its semi-sterility was unaffected by growth duration but was conditioned by a recessive nuclear gene whose action leads to pollen semi-sterility and anther indehiscence, and the gene was named as PSS1 (pollen semi-sterile).
- Fine mapping of PSS1, a pollen semi-sterile gene in rice (Oryza sativa L.).
- Here, we describe a rice pollen semi-sterility1 (PSS1) mutant, which displays reduced spikelet fertility (~40%) primarily caused by reduced pollen viability (~50% viable), and defective anther dehiscence.
- Furthermore, PSS1 expression is significantly upregulated during anther development and peaks during male meiosis.
- Consistent with this, lagging chromosomes and chromosomal bridges were found at anaphase I and anaphase II of male meiosis in the PSS1 mutant.
- PSS1 is broadly expressed in various organs, with highest expression in panicles.
Functional Keywords
Literature and News
Gene Resources
- UniProt: F9W301
- EMBL: AK287457, AP004562, AP008214
- AlphaFoldDB: F9W301
- EnsemblPlants: Os08t0117000-01
- Gramene: Os08t0117000-01
- KEGG: dosa:Os08g0117000, osa:4344521
- Orthologous matrix: FYEDAQQ
- InterPro: IPR001752, IPR019821, IPR027417
- PANTHER: PTHR47968, PTHR47968:SF17
- SUPFAM: SSF52540
- PROSITE: PS00411, PS50067
- Gene3D: 3.40.850.10
- OrthoDB: F9W301
- SWISS-MODEL: F9W301
- Conserved Domain Database: cd01369
- eggNOG: KOG0240
Sequences
cDNA Sequence
- >LOC_Os08g02380.2
ATCTTCTTCTCTCGTTTTTCCCTTTGCCGCAGAGCGAGAGCGGCAGCGGGCAGCGGCGCGCGGCCGGAGGCAGGCGGAGCGGCGGCGTCGGCAGGTTGCGCCGCGAGCGCGGCGGCCACTTCCCCATTCCTTCCCGTTTCGCCGACGAGACGCTCACCGGCGCACACTCGCCGCCTCCCGCCGCCGCTCATCGGTCCGGTACTCCTCAGTCGTCGGAAAGATGTCCAACGTGACTGTATGTGTGCGATTCAGACCACTGAGCCACAAAGAGAGGAAGACTAATGGTGACAAGGTCTGCTTCAAGAGATTGGATTCAGAATCTTTTGTTTTCAAGGATGAGAGGGAAGAAGATGTCATATTCAGCTTTGACAGGGTGTTTTATGAAGATGCAGAACAGTCTGATGTCTATAACTTCCTTGCAGTGCCAATTGTCGCAGATGCCATCAGTGGAATAAATGGGACTATAATTACTTATGGTCAGACTGGAGCAGGAAAGACATACAGCATGGAGGGGCCGAGCATCTTGCATTGCAATAAGCAGAAAACTGGACTAGTCCAGAGAGTTGTAGATGAGCTTTTTCAATCTCTACAATCATCAGAAAGCATGGCTATGTGGAGTGTGAAATTGTCGATGGTGGAGATATATTTGGAAAAAGTAAGGGATCTTCTTGACTTGTCCAAGGACAACCTACAAATCAAAGAGAGTAAAACTCAAGGGATCTACATTTCTGGAGCAACAGAAGTATCCATCCAGAATAGTTCAGATGCCTTGGAGTGCCTTTCTGAAGGAATTGCCAACAGAGCTGTTGGAGAAACACAAATGAACCTGGCTAGTAGTAGAAGTCACTGCTTATACATTTTTTCAGTTCAACAAGGATCAACTTCTGATGAGAGGGTGAGAGGAGGGAAGATTATTCTTGTTGATTTAGCTGGTTCAGAGAAGGTTGAGAAAACTGGTGCTGAAGGACGAGTTCTTGATGAGGCAAAGACAATCAACAAATCTCTCTCAGTTCTCGGGAATGTTGTCAATGCTCTAACAACTGGTAAACCGAATCATGTGCCTTATCGTGACTCTAAGCTTACGCGCATTCTTCAAGATGCACTGGGTGGCAACTCAAGAGCGGCATTACTGTGCTGTTGTTCCCCCAGTGCTTCAAATGCACCAGAAAGTTTGTCTACTGTTCGTTTCGGAACAAGGACAAAGCTCATAAAGACCACACCCAAATCAATCTCTCCCGAAGTGGATAGCATCAAGAAGCCCATCCCTGATTCTCATGGCCAAAATGATCTGCGTGACCGGATTCTGAACAAGTTAAGGTTGAGCCTGAAGGAGGAAGATGTGGACCTTCTGGAGGAACTGTTCGTGCAGGAAGGCATCATCTTCGACCCCAACTACTCCGTGGCAGACATCGACTCAGCCTGCCAAGACGCCGCGAGCCAGGAGGTCTCACTGCTCACACAAGCTGTGGAGGAACTGAAAGAAACCGTCGAAGAGCTCACCGATGAGAACGAGAGGTTGAGGGGTGAACTCGAGCTCGCGCAGGAGGCTGCCGCCGCCGCCGCTGCTGCTCGGGCTGACGGCGCGCTGCTTGGTTTCGTGCCGGCGGTCGCCATCAGCTCCCTCCTCCGCCCCTTTGGGTTCGTTCCAGACTGAAGACGAGATACAAGGTCACACATAATACATTTTGCTGCCATTTCTGACGTGAGATACAGTGACGGTAGGAACTAGGAAGAAATGCTAATGTCATCGATCGAACTTCTCACTTGCCTTTATCGCTGTGATAGTACACAGAAGGAACATTGACATCGAGCTGGAAGTTTTGTCATTTCGAGAATACGCGTGTTTGAGTGGCTAATGTCACCGATCGAACTTCTCACTTGCCTTCATCGTTGTTATAGTACACAGAAAGAACATTGACATCGATCTAAAAGTTGTCATTACGA - >LOC_Os08g02380.1
ATCTTCTTCTCTCGTTTTTCCCTTTGCCGCAGAGCGAGAGCGGCAGCGGGCAGCGGCGCGCGGCCGGAGGCAGGCGGAGCGGCGGCGTCGGCAGGTTGCGCCGCGAGCGCGGCGGCCACTTCCCCATTCCTTCCCGTTTCGCCGACGAGACGCTCACCGGCGCACACTCGCCGCCTCCCGCCGCCGCTCATCGGTCCGGTACTCCTCAGTCGTCGGAAAGATGTCCAACGTGACTGTATGTGTGCGATTCAGACCACTGAGCCACAAAGAGAGGAAGACTAATGGTGACAAGGTCTGCTTCAAGAGATTGGATTCAGAATCTTTTGTTTTCAAGGATGAGAGGGAAGAAGATGTCATATTCAGCTTTGACAGGGTGTTTTATGAAGATGCAGAACAGTCTGATGTCTATAACTTCCTTGCAGTGCCAATTGTCGCAGATGCCATCAGTGGAATAAATGGGACTATAATTACTTATGGTCAGACTGGAGCAGGAAAGACATACAGCATGGAGGGGCCGAGCATCTTGCATTGCAATAAGCAGAAAACTGGACTAGTCCAGAGAGTTGTAGATGAGCTTTTTCAATCTCTACAATCATCAGAAAGCATGGCTATGTGGAGTGTGAAATTGTCGATGGTGGAGATATATTTGGAAAAAGTAAGGGATCTTCTTGACTTGTCCAAGGACAACCTACAAATCAAAGAGAGTAAAACTCAAGGGATCTACATTTCTGGAGCAACAGAAGTATCCATCCAGAATAGTTCAGATGCCTTGGAGTGCCTTTCTGAAGGAATTGCCAACAGAGCTGTTGGAGAAACACAAATGAACCTGGCTAGTAGTAGAAGTCACTGCTTATACATTTTTTCAGTTCAACAAGGATCAACTTCTGATGAGAGGGTGAGAGGAGGGAAGATTATTCTTGTTGATTTAGCTGGTTCAGAGAAGGTTGAGAAAACTGGTGCTGAAGGACGAGTTCTTGATGAGGCAAAGACAATCAACAAATCTCTCTCAGTTCTCGGGAATGTTGTCAATGCTCTAACAACTGGTAAACCGAATCATGTGCCTTATCGTGACTCTAAGCTTACGCGCATTCTTCAAGATGCACTGGGTGGCAACTCAAGAGCGGCATTACTGTGCTGTTGTTCCCCCAGTGCTTCAAATGCACCAGAAAGTTTGTCTACTGTTCGTTTCGGAACAAGGACAAAGCTCATAAAGACCACACCCAAATCAATCTCTCCCGAAGTGGATAGCATCAAGAAGCCCATCCCTGATTCTCATGGCCAAAATGATCTGCGTGACCGGATTCTGAACAAGTTAAGGTTGAGCCTGAAGGAGGAAGATGTGGACCTTCTGGAGGAACTGTTCGTGCAGGAAGGCATCATCTTCGACCCCAACTACTCCGTGGCAGACATCGACTCAGCCTGCCAAGACGCCGCGAGCCAGGAGGTCTCACTGCTCACACAAGCTGTGGAGGAACTGAAAGAAACCGTCGAAGAGCTCACCGATGAGAACGAGAGGTTGAGGGGTGAACTCGAGCTCGCGCAGGAGGCTGCCGCCGCCGCCGCTGCTGCTCGGGCTGACGGCGCGCTGCTTGGTTTCGTGCCGGCGGTCGCCATCAGCTCCCTCCTCCGCCCCTTTGGGTTCGTTCCAGACTGAAGACGAGATACAAGGTCACACATAATACATTTTGCTGCCATTTCTGACGTGAGATACAGTGACGGTAGGAACTAGGAAGAAATGCTAATGTCATCGATCGAACTTCTCACTTGCCTTTATCGCTGTGATAGTACACAGAAGGAACATTGACATCGAGCTGGAAGTTTTGTCATTTCGAGAATACGCGTGTTTGAGTGGCTAATGTCACCGATCGAACTTCTCACTTGCCTTCATCGTTGTTATAGTACACAGAAAGAACATTGACATCGATCTAAAAGTTGTCATTACGA
CDS Sequence
- >LOC_Os08g02380.2
ATGTCCAACGTGACTGTATGTGTGCGATTCAGACCACTGAGCCACAAAGAGAGGAAGACTAATGGTGACAAGGTCTGCTTCAAGAGATTGGATTCAGAATCTTTTGTTTTCAAGGATGAGAGGGAAGAAGATGTCATATTCAGCTTTGACAGGGTGTTTTATGAAGATGCAGAACAGTCTGATGTCTATAACTTCCTTGCAGTGCCAATTGTCGCAGATGCCATCAGTGGAATAAATGGGACTATAATTACTTATGGTCAGACTGGAGCAGGAAAGACATACAGCATGGAGGGGCCGAGCATCTTGCATTGCAATAAGCAGAAAACTGGACTAGTCCAGAGAGTTGTAGATGAGCTTTTTCAATCTCTACAATCATCAGAAAGCATGGCTATGTGGAGTGTGAAATTGTCGATGGTGGAGATATATTTGGAAAAAGTAAGGGATCTTCTTGACTTGTCCAAGGACAACCTACAAATCAAAGAGAGTAAAACTCAAGGGATCTACATTTCTGGAGCAACAGAAGTATCCATCCAGAATAGTTCAGATGCCTTGGAGTGCCTTTCTGAAGGAATTGCCAACAGAGCTGTTGGAGAAACACAAATGAACCTGGCTAGTAGTAGAAGTCACTGCTTATACATTTTTTCAGTTCAACAAGGATCAACTTCTGATGAGAGGGTGAGAGGAGGGAAGATTATTCTTGTTGATTTAGCTGGTTCAGAGAAGGTTGAGAAAACTGGTGCTGAAGGACGAGTTCTTGATGAGGCAAAGACAATCAACAAATCTCTCTCAGTTCTCGGGAATGTTGTCAATGCTCTAACAACTGGTAAACCGAATCATGTGCCTTATCGTGACTCTAAGCTTACGCGCATTCTTCAAGATGCACTGGGTGGCAACTCAAGAGCGGCATTACTGTGCTGTTGTTCCCCCAGTGCTTCAAATGCACCAGAAAGTTTGTCTACTGTTCGTTTCGGAACAAGGACAAAGCTCATAAAGACCACACCCAAATCAATCTCTCCCGAAGTGGATAGCATCAAGAAGCCCATCCCTGATTCTCATGGCCAAAATGATCTGCGTGACCGGATTCTGAACAAGTTAAGGTTGAGCCTGAAGGAGGAAGATGTGGACCTTCTGGAGGAACTGTTCGTGCAGGAAGGCATCATCTTCGACCCCAACTACTCCGTGGCAGACATCGACTCAGCCTGCCAAGACGCCGCGAGCCAGGAGGTCTCACTGCTCACACAAGCTGTGGAGGAACTGAAAGAAACCGTCGAAGAGCTCACCGATGAGAACGAGAGGTTGAGGGGTGAACTCGAGCTCGCGCAGGAGGCTGCCGCCGCCGCCGCTGCTGCTCGGGCTGACGGCGCGCTGCTTGGTTTCGTGCCGGCGGTCGCCATCAGCTCCCTCCTCCGCCCCTTTGGGTTCGTTCCAGACTGA - >LOC_Os08g02380.1
ATGTCCAACGTGACTGTATGTGTGCGATTCAGACCACTGAGCCACAAAGAGAGGAAGACTAATGGTGACAAGGTCTGCTTCAAGAGATTGGATTCAGAATCTTTTGTTTTCAAGGATGAGAGGGAAGAAGATGTCATATTCAGCTTTGACAGGGTGTTTTATGAAGATGCAGAACAGTCTGATGTCTATAACTTCCTTGCAGTGCCAATTGTCGCAGATGCCATCAGTGGAATAAATGGGACTATAATTACTTATGGTCAGACTGGAGCAGGAAAGACATACAGCATGGAGGGGCCGAGCATCTTGCATTGCAATAAGCAGAAAACTGGACTAGTCCAGAGAGTTGTAGATGAGCTTTTTCAATCTCTACAATCATCAGAAAGCATGGCTATGTGGAGTGTGAAATTGTCGATGGTGGAGATATATTTGGAAAAAGTAAGGGATCTTCTTGACTTGTCCAAGGACAACCTACAAATCAAAGAGAGTAAAACTCAAGGGATCTACATTTCTGGAGCAACAGAAGTATCCATCCAGAATAGTTCAGATGCCTTGGAGTGCCTTTCTGAAGGAATTGCCAACAGAGCTGTTGGAGAAACACAAATGAACCTGGCTAGTAGTAGAAGTCACTGCTTATACATTTTTTCAGTTCAACAAGGATCAACTTCTGATGAGAGGGTGAGAGGAGGGAAGATTATTCTTGTTGATTTAGCTGGTTCAGAGAAGGTTGAGAAAACTGGTGCTGAAGGACGAGTTCTTGATGAGGCAAAGACAATCAACAAATCTCTCTCAGTTCTCGGGAATGTTGTCAATGCTCTAACAACTGGTAAACCGAATCATGTGCCTTATCGTGACTCTAAGCTTACGCGCATTCTTCAAGATGCACTGGGTGGCAACTCAAGAGCGGCATTACTGTGCTGTTGTTCCCCCAGTGCTTCAAATGCACCAGAAAGTTTGTCTACTGTTCGTTTCGGAACAAGGACAAAGCTCATAAAGACCACACCCAAATCAATCTCTCCCGAAGTGGATAGCATCAAGAAGCCCATCCCTGATTCTCATGGCCAAAATGATCTGCGTGACCGGATTCTGAACAAGTTAAGGTTGAGCCTGAAGGAGGAAGATGTGGACCTTCTGGAGGAACTGTTCGTGCAGGAAGGCATCATCTTCGACCCCAACTACTCCGTGGCAGACATCGACTCAGCCTGCCAAGACGCCGCGAGCCAGGAGGTCTCACTGCTCACACAAGCTGTGGAGGAACTGAAAGAAACCGTCGAAGAGCTCACCGATGAGAACGAGAGGTTGAGGGGTGAACTCGAGCTCGCGCAGGAGGCTGCCGCCGCCGCCGCTGCTGCTCGGGCTGACGGCGCGCTGCTTGGTTTCGTGCCGGCGGTCGCCATCAGCTCCCTCCTCCGCCCCTTTGGGTTCGTTCCAGACTGA
Protein Sequence
- >LOC_Os08g02380.2
MSNVTVCVRFRPLSHKERKTNGDKVCFKRLDSESFVFKDEREEDVIFSFDRVFYEDAEQSDVYNFLAVPIVADAISGINGTIITYGQTGAGKTYSMEGPSILHCNKQKTGLVQRVVDELFQSLQSSESMAMWSVKLSMVEIYLEKVRDLLDLSKDNLQIKESKTQGIYISGATEVSIQNSSDALECLSEGIANRAVGETQMNLASSRSHCLYIFSVQQGSTSDERVRGGKIILVDLAGSEKVEKTGAEGRVLDEAKTINKSLSVLGNVVNALTTGKPNHVPYRDSKLTRILQDALGGNSRAALLCCCSPSASNAPESLSTVRFGTRTKLIKTTPKSISPEVDSIKKPIPDSHGQNDLRDRILNKLRLSLKEEDVDLLEELFVQEGIIFDPNYSVADIDSACQDAASQEVSLLTQAVEELKETVEELTDENERLRGELELAQEAAAAAAAARADGALLGFVPAVAISSLLRPFGFVPD* - >LOC_Os08g02380.1
MSNVTVCVRFRPLSHKERKTNGDKVCFKRLDSESFVFKDEREEDVIFSFDRVFYEDAEQSDVYNFLAVPIVADAISGINGTIITYGQTGAGKTYSMEGPSILHCNKQKTGLVQRVVDELFQSLQSSESMAMWSVKLSMVEIYLEKVRDLLDLSKDNLQIKESKTQGIYISGATEVSIQNSSDALECLSEGIANRAVGETQMNLASSRSHCLYIFSVQQGSTSDERVRGGKIILVDLAGSEKVEKTGAEGRVLDEAKTINKSLSVLGNVVNALTTGKPNHVPYRDSKLTRILQDALGGNSRAALLCCCSPSASNAPESLSTVRFGTRTKLIKTTPKSISPEVDSIKKPIPDSHGQNDLRDRILNKLRLSLKEEDVDLLEELFVQEGIIFDPNYSVADIDSACQDAASQEVSLLTQAVEELKETVEELTDENERLRGELELAQEAAAAAAAARADGALLGFVPAVAISSLLRPFGFVPD*