Gene Details:
- MSU gene ID: LOC_Os07g49370
- RAPdb gene ID: Os07g0694400
- Gene Symbol: OsIRX9
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Furthermore, our expression data indicate that OsIRX9 and OsIRX9L may function in building the xylan backbone in the secondary and primary cell walls, respectively.
- The expression of OsIRX9 in the irx9 mutant resulted in XylT activity of stems that was over double that of wild type plants, and the stem strength of this line increased to 124% above that of wild type.
Function-related keywords:
Literature:
- Three Novel Rice Genes Closely Related to the Arabidopsis IRX9, IRX9L, and IRX14 Genes and Their Roles in Xylan Biosynthesis . DOI: 10.3389/fpls.2013.00083 ; PMID: 23596448
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g49370.1
AGGAAAACCCGCACCCTCACTCTCAGTCTAGCTCCCTGCTGCTTCCACAGCTACTTAATTGTAGGATGTAGGATGGTGCGTGCTAGCTGCAGCTCACTACTACAACTGTACTAGCTAGCAGATCGCAGCTAGTAGCAGAGAGGAGAGGAGAGGAGTTGATCTGAGGTAGGATAGGAGAGCAGCAGATCAGATCAGATCGATCCGGGCAGGCGGGCAGCATGGCGTCGGCAGGTGGCTGCAAGAAGAAGACGGGAAATAGTCGTAGTAGGAGCCCTCGTAGCCCGGTGGTGCTGCGGAGGGCGATGCTGCATTCGTCCCTCTGCTTCCTGGTCGGCCTCCTTGCCGGCCTCGCCGCCCCCTCCGACTGGCCCGCTGCCGCCGGCGCCGCCGTCTTCCTCCGCACGCTCCGTGCCAGCAATGTCATCTTCAGTCGCAGTAGCAATAGGCCGCAGCAGCCGCAGCTGGTGGTAGTGGTCACCACCACCGAGCAGTCCGACGACTCCGAGCGGCGCGCCGCCGGGCTGACGCGCACGGCGCACGCGCTGCGGCTGGTGTCGCCGCCGCTTCTCTGGCTGGTGGTGGAGGAGGCCCCCGCGGAGAAGCACGCGGCGCCGCCCACGGCGCGGCTGCTGCGGCGCACGGGGGTGGTGCACCGCCACCTCCTCATGAAACAAGGAGATGATGATTTTAGCATGCAGATATCGATGAGGAGGGAGCAGCAGAGGAACGTGGCTCTGCGCCACATCGAGGACCACCGCATCGCCGGCGTCGTGCTCTTCGGGGGCCTCGCCGACATCTACGACCTCCGCCTCCTCCACCACCTCAGGGACATCAGGACATTTGGTGCGTGGCCCGTGGCGACAGTGTCGGCGTACGAGCGAAAGGTGATGGTGCAAGGCCCACTCTGCATCAACACATCCTCCTCGTCGGTGATCACCCGCGGCTGGTTCGATATGGACATGGACATGGCGGCCGGCGGCGAGCGGCGAGCGGCCGCTGACCGGCCGCCTCCGGAGACGTTAATGGAAGTGGGCGGGTTCGCGTTCAGCAGCTGGATGCTGTGGGACCCGCACAGGTGGGACCGCTTCCCCCTCTCCGACCCCGACGCCTCGCAGGAATCAGTGAAGTTCGTGCAGCGGGTGGCGGTGGAGGAATACAACCAGTCGACGACGAGGGGGATGCCGGACTCCGATTGCTCCCAAATCATGCTCTGGCGCATCCAAACTACGCTCTAGGCTCTAGCTAGCTTAATTTCATTCTTCTTCCTTAATCATCGATCGTCAATCTCCAAAACCCACACTCCTACTCCTATCTAAGACAAATACCTGCATATAAATATATACACACGTATACGTGGTGTGTTCACGTACGGTTAATTAAGCTGCAAGGAAGTACTCCGCAATACTACATGCATATATGTTTTCACCTTACTTACGTCGAGTCTTTGTGATTCTCGGTCTCTTTTTAAGTAAGAGTGACAATATATTCACGAGGAAAATACATCAGTGATATACCACAACCTGTGTGGAGGGTGAAATTTTTAGTCACTCGCTTTGTAAGTTGATCAACCCAGCTTAAGATTCTGATAAGCAGCTGCTGAGAAACTAGCTGGTGACTTCTAAGTTCATTTTCTAGATTCTACAACTA
CDS Sequence
- >LOC_Os07g49370.1
ATGGCGTCGGCAGGTGGCTGCAAGAAGAAGACGGGAAATAGTCGTAGTAGGAGCCCTCGTAGCCCGGTGGTGCTGCGGAGGGCGATGCTGCATTCGTCCCTCTGCTTCCTGGTCGGCCTCCTTGCCGGCCTCGCCGCCCCCTCCGACTGGCCCGCTGCCGCCGGCGCCGCCGTCTTCCTCCGCACGCTCCGTGCCAGCAATGTCATCTTCAGTCGCAGTAGCAATAGGCCGCAGCAGCCGCAGCTGGTGGTAGTGGTCACCACCACCGAGCAGTCCGACGACTCCGAGCGGCGCGCCGCCGGGCTGACGCGCACGGCGCACGCGCTGCGGCTGGTGTCGCCGCCGCTTCTCTGGCTGGTGGTGGAGGAGGCCCCCGCGGAGAAGCACGCGGCGCCGCCCACGGCGCGGCTGCTGCGGCGCACGGGGGTGGTGCACCGCCACCTCCTCATGAAACAAGGAGATGATGATTTTAGCATGCAGATATCGATGAGGAGGGAGCAGCAGAGGAACGTGGCTCTGCGCCACATCGAGGACCACCGCATCGCCGGCGTCGTGCTCTTCGGGGGCCTCGCCGACATCTACGACCTCCGCCTCCTCCACCACCTCAGGGACATCAGGACATTTGGTGCGTGGCCCGTGGCGACAGTGTCGGCGTACGAGCGAAAGGTGATGGTGCAAGGCCCACTCTGCATCAACACATCCTCCTCGTCGGTGATCACCCGCGGCTGGTTCGATATGGACATGGACATGGCGGCCGGCGGCGAGCGGCGAGCGGCCGCTGACCGGCCGCCTCCGGAGACGTTAATGGAAGTGGGCGGGTTCGCGTTCAGCAGCTGGATGCTGTGGGACCCGCACAGGTGGGACCGCTTCCCCCTCTCCGACCCCGACGCCTCGCAGGAATCAGTGAAGTTCGTGCAGCGGGTGGCGGTGGAGGAATACAACCAGTCGACGACGAGGGGGATGCCGGACTCCGATTGCTCCCAAATCATGCTCTGGCGCATCCAAACTACGCTCTAG
Protein Sequence
- >LOC_Os07g49370.1
MASAGGCKKKTGNSRSRSPRSPVVLRRAMLHSSLCFLVGLLAGLAAPSDWPAAAGAAVFLRTLRASNVIFSRSSNRPQQPQLVVVVTTTEQSDDSERRAAGLTRTAHALRLVSPPLLWLVVEEAPAEKHAAPPTARLLRRTGVVHRHLLMKQGDDDFSMQISMRREQQRNVALRHIEDHRIAGVVLFGGLADIYDLRLLHHLRDIRTFGAWPVATVSAYERKVMVQGPLCINTSSSSVITRGWFDMDMDMAAGGERRAAADRPPPETLMEVGGFAFSSWMLWDPHRWDRFPLSDPDASQESVKFVQRVAVEEYNQSTTRGMPDSDCSQIMLWRIQTTL*