Gene Details:

Functional Descriptions:

  • RNA in situ hybridization showed that the accumulation of OsFAD8 mRNA was abundant in leaves but hardly detectable in roots.
  • Fatty acid analysis of homozygous OsFAD8 T-DNA knockout mutant and wild type plants have exhibited changes in fatty acid composition after cold stress, thus confirming that OsFAD8 gene codes for omega-3 fatty acid desaturase activity at low temperature.
  • Photosynthetic efficiency and recovery of OsFAD8 knockout mutants are significantly reduced after cold stress as compared to those of wild type plants.
  • The OsFAD8 transcript level in leaves was much higher at 15 degrees C than at normal temperature (25 degrees C).
  • These data suggest that OsFAD8 encodes a temperature-dependent chloroplast omega-3 fatty acid desaturase.
  • Expression of two rice plastidial omega-3 desaturase genes, OsFAD7 and OsFAD8 under different temperatures has been investigated.
  • Transcript levels of OsFAD7 increased at high temperature; while those of OsFAD8 increased at low temperatures.
  • Characterization of OsFAD8 suggests that it has a functional role in maintaining levels of trienoic fatty acids and stress tolerance at low temperatures.
  • Effects of low temperature stress on rice (Oryza sativa L.) plastid omega-3 desaturase gene, OsFAD8 and its functional analysis using T-DNA mutants.
  • A cDNA, designated OsFAD8, encoding a chloroplast omega-3 fatty acid desaturase responsible for trienoic fatty acid formation, was isolated from the leaves of Oryza sativa L.
  • At room temperature (28 C), OsFAD8 plants exhibited significant alterations in fatty acid (FA) unsaturation for all four investigated plastidic lipid classes.
  • Taken together, our findings suggest that FA unsaturation by OsFAD8 is crucial for the acclimation of higher plants to low-temperature stress.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os07g49310.1
    AGTTGGGTTTTCCTTTCCTTTTTGCGTTGATAAACCCAGGCGGGGGCGGCGCCGCGCAGCTTACCAATACCAATTGGAGTAGAACCAACCAAGGAAAGAATGGCCCGGCTGCTACTCTCCGGCGTCGCGCCGCTCCCCCTCCTCCCCTGCCGCCGTCGCGCCATTGCATTTGCGCTCCCACTTGGGAATGTCCGCCTCCGCCTCCGTGTGGCCGCACCCACCAGCCGCGTGGCCACCGTGGAGGAGGACGACAATGAAAATAATGCTCCTCCTCCTCCTTGTGAGGACTTCGACCCGGGCGCGGCGCCCCCGTTTGGTCTGGCCGACATCCGCGCCGCTATCCCCAAGCACTGTTGGGTGAAGGACCCCTGGCGATCCATGGGGTACGTGCTGCGCGACGTGGTGGTGGTGTTCGCCCTCGCTGCCGCCGCCGCGCGCCTCCACAGCTGCCTCGCCTGGCCGCTCTACTGGGCGGCGCAGGGAACCATGTTCTGGGCGCTCTTCGTCCTCGGCCACGACTGCGGGCACGGGAGCTTCTCCAACAACTCGAGGCTCAACAGCGTGATGGGCCACATACTCCACTCCTCCATCCTCGTACCCTACCATGGCTGGAGGATTAGCCACAGGACGCATCATCAGAACCATGGCCATGTCGACAAGGATGAGTCCTGGCATCCCCTCCCCGAGCGGCTGTACAGGAGCCTTAACAGAGCCACCCGGATGCTCCGCTTCTCCATACCCTTCCCCATGCTCGCCTACCCATTCTACCTGTGGTCTCGGAGCCCAGGAAAGTCTGGTTCGCATTTCCATCCCAGCAGCGACCTGTTCCAGCCCAACGAAAGGAACGATGTGCTGACATCCACAGCGTGCTGGGTGGCCATGGCTGCCCTCCTCGCAGGCCTCACCTTCCTCATGGGACCCCTCCTCATGCTCAACCTCTACTTTGTCCCTTACTGGATTTTTGTTATGTGGCTGGACTTCGTCACCTACTTGCACCATCACGGCCACAACGACAAGCTGCCCTGGTACCGTGGCAAGGAATGGAGCTATTTGCGGGGAGGACTGACGACAGTGGACAGGGACTATGGGTGGATCAACAACATCCACCACGACATCGGGACACATGTCATTCACCATCTTTTCCCCCAAATCCCGCATTACCATCTAATTGAGGCGACGGAAGCAGCAAAGGGTGTGATGGGGAAATACTACAGGGAGCCGGACAAGTCTGGGCCTTTTCCCTTACACCTGTTTGGAGCGCTGTCCCGGAGCTTGAAACGCGACCACTATGTCAGCGACACCGGAGATGTGGTCTACTACCAGACCGACCCTGCTAACTAAATTAATTTTACATTTCCTTCAATTCTTTTAAGCCCGGAGGCTTAAATTAGCTTAATTAGATAGCTGCGACTGACCTGGACATGTATTCAACATTCGATCCACAGACAGATAGAAAGAGACCTATATATATCGCCGATCAATCGATATATATGTGCGTGTCCGTGTGGAGATATGGAGGTCACAATTCTTTCCATGGATATATAGGAGTATACATACATGTATTGAAGGATATGTAGCTAGATTTGATGTGCGTGCGTGCTGTACTTTGTAAGACGCAGCATAAAGCTAGTGACAATTTGGACAAGGCCATATTGATATATCCATTATATACACACCTCAATGCCTCATT
  • >LOC_Os07g49310.2
    AGTTGGGTTTTCCTTTCCTTTTTGCGTTGATAAACCCAGGCGGGGGCGGCGCCGCGCAGCTTACCAATACCAATTGGAGTAGAACCAACCAAGGAAAGAATGGCCCGGCTGCTACTCTCCGGCGTCGCGCCGCTCCCCCTCCTCCCCTGCCGCCGTCGCGCCATTGCATTTGCGCTCCCACTTGGGAATGTCCGCCTCCGCCTCCGTGTGGCCGCACCCACCAGCCGCGTGGCCACCGTGGAGGAGGACGACAATGAAAATAATGCTCCTCCTCCTCCTTGTGAGGACTTCGACCCGGGCGCGGCGCCCCCGTTTGGTCTGGCCGACATCCGCGCCGCTATCCCCAAGCACTGTTGGGTGAAGGACCCCTGGCGATCCATGGGGTACGTGCTGCGCGACGTGGTGGTGGTGTTCGCCCTCGCTGCCGCCGCCGCGCGCCTCCACAGCTGCCTCGCCTGGCCGCTCTACTGGGCGGCGCAGGGAACCATGTTCTGGGCGCTCTTCGTCCTCGGCCACGACTGCGGGCACGGGAGCTTCTCCAACAACTCGAGGCTCAACAGCGTGATGGGCCACATACTCCACTCCTCCATCCTCGTACCCTACCATGGCTGGAGGATTAGCCACAGGACGCATCATCAGAACCATGGCCATGTCGACAAGGATGAGTCCTGGCATCCCCTCCCCGAGCGGCTGTACAGGAGCCTTAACAGAGCCACCCGGATGCTCCGCTTCTCCATACCCTTCCCCATGCTCGCCTACCCATTCTACCTGTGGTCTCGGAGCCCAGGAAAGTCTGGTTCGCATTTCCATCCCAGCAGCGACCTGTTCCAGCCCAACGAAAGGAACGATGTGCTGACATCCACAGCGTGCTGGGTGGCCATGGCTGCCCTCCTCGCAGGCCTCACCTTCCTCATGGGACCCCTCCTCATGCTCAACCTCTACTTTGTCCCTTACTGGATTTTTGTTATGTGGCTGGACTTCGTCACCTACTTGCACCATCACGGCCACAACGACAAGCTGCCCTGGTACCGTGGCAAGGAATGGAGCTATTTGCGGGGAGGACTGACGACAGTGGACAGGGACTATGGGTGGATCAACAACATCCACCACGACATCGGGACACATGTCATTCACCATCTTTTCCCCCAAATCCCGCATTACCATCTAATTGAGGCGACGGAAGCAGCAAAGGGTGTGATGGGGAAATACTACAGGGAGCCGGACAAGTCTGGGCCTTTTCCCTTACACCTGTTTGGAGCGCTGTCCCGGAGCTTGAAACGCGACCACTATGTCAGCGACACCGGAGATGTGGTCTACTACCAGACCGACCCTGCTAACTAAATTAATTTTACATTTCCTTCAATTCTTTTAAGCCCGGAGGCTTAAATTAGCTTAATTAGATAGCTGCGACTGACCTGGACATGTATTCAACATTCGATCCACAGACAGATAGAAAGAGACCTATATATATCGCCGATCAATCGATATATATGTGCGTGTCCGTGTGGAGATATGGAGGTCACAATTCTTTCCATGGATATATAGGAGTATACATACATGTATTGAAGGATATGTAGCTAGATTTGATGTGCGTGCGTGCTGTACTTTGTAAGACGCAGCATAAAGCTAGTGACAATTTGGACAAGGCCATATTGATATATCCATTATATACACACCTCAATGCCTCATT
CDS Sequence
  • >LOC_Os07g49310.1
    ATGGCCCGGCTGCTACTCTCCGGCGTCGCGCCGCTCCCCCTCCTCCCCTGCCGCCGTCGCGCCATTGCATTTGCGCTCCCACTTGGGAATGTCCGCCTCCGCCTCCGTGTGGCCGCACCCACCAGCCGCGTGGCCACCGTGGAGGAGGACGACAATGAAAATAATGCTCCTCCTCCTCCTTGTGAGGACTTCGACCCGGGCGCGGCGCCCCCGTTTGGTCTGGCCGACATCCGCGCCGCTATCCCCAAGCACTGTTGGGTGAAGGACCCCTGGCGATCCATGGGGTACGTGCTGCGCGACGTGGTGGTGGTGTTCGCCCTCGCTGCCGCCGCCGCGCGCCTCCACAGCTGCCTCGCCTGGCCGCTCTACTGGGCGGCGCAGGGAACCATGTTCTGGGCGCTCTTCGTCCTCGGCCACGACTGCGGGCACGGGAGCTTCTCCAACAACTCGAGGCTCAACAGCGTGATGGGCCACATACTCCACTCCTCCATCCTCGTACCCTACCATGGCTGGAGGATTAGCCACAGGACGCATCATCAGAACCATGGCCATGTCGACAAGGATGAGTCCTGGCATCCCCTCCCCGAGCGGCTGTACAGGAGCCTTAACAGAGCCACCCGGATGCTCCGCTTCTCCATACCCTTCCCCATGCTCGCCTACCCATTCTACCTGTGGTCTCGGAGCCCAGGAAAGTCTGGTTCGCATTTCCATCCCAGCAGCGACCTGTTCCAGCCCAACGAAAGGAACGATGTGCTGACATCCACAGCGTGCTGGGTGGCCATGGCTGCCCTCCTCGCAGGCCTCACCTTCCTCATGGGACCCCTCCTCATGCTCAACCTCTACTTTGTCCCTTACTGGATTTTTGTTATGTGGCTGGACTTCGTCACCTACTTGCACCATCACGGCCACAACGACAAGCTGCCCTGGTACCGTGGCAAGGAATGGAGCTATTTGCGGGGAGGACTGACGACAGTGGACAGGGACTATGGGTGGATCAACAACATCCACCACGACATCGGGACACATGTCATTCACCATCTTTTCCCCCAAATCCCGCATTACCATCTAATTGAGGCGACGGAAGCAGCAAAGGGTGTGATGGGGAAATACTACAGGGAGCCGGACAAGTCTGGGCCTTTTCCCTTACACCTGTTTGGAGCGCTGTCCCGGAGCTTGAAACGCGACCACTATGTCAGCGACACCGGAGATGTGGTCTACTACCAGACCGACCCTGCTAACTAA
  • >LOC_Os07g49310.2
    ATGGCCCGGCTGCTACTCTCCGGCGTCGCGCCGCTCCCCCTCCTCCCCTGCCGCCGTCGCGCCATTGCATTTGCGCTCCCACTTGGGAATGTCCGCCTCCGCCTCCGTGTGGCCGCACCCACCAGCCGCGTGGCCACCGTGGAGGAGGACGACAATGAAAATAATGCTCCTCCTCCTCCTTGTGAGGACTTCGACCCGGGCGCGGCGCCCCCGTTTGGTCTGGCCGACATCCGCGCCGCTATCCCCAAGCACTGTTGGGTGAAGGACCCCTGGCGATCCATGGGGTACGTGCTGCGCGACGTGGTGGTGGTGTTCGCCCTCGCTGCCGCCGCCGCGCGCCTCCACAGCTGCCTCGCCTGGCCGCTCTACTGGGCGGCGCAGGGAACCATGTTCTGGGCGCTCTTCGTCCTCGGCCACGACTGCGGGCACGGGAGCTTCTCCAACAACTCGAGGCTCAACAGCGTGATGGGCCACATACTCCACTCCTCCATCCTCGTACCCTACCATGGCTGGAGGATTAGCCACAGGACGCATCATCAGAACCATGGCCATGTCGACAAGGATGAGTCCTGGCATCCCCTCCCCGAGCGGCTGTACAGGAGCCTTAACAGAGCCACCCGGATGCTCCGCTTCTCCATACCCTTCCCCATGCTCGCCTACCCATTCTACCTGTGGTCTCGGAGCCCAGGAAAGTCTGGTTCGCATTTCCATCCCAGCAGCGACCTGTTCCAGCCCAACGAAAGGAACGATGTGCTGACATCCACAGCGTGCTGGGTGGCCATGGCTGCCCTCCTCGCAGGCCTCACCTTCCTCATGGGACCCCTCCTCATGCTCAACCTCTACTTTGTCCCTTACTGGATTTTTGTTATGTGGCTGGACTTCGTCACCTACTTGCACCATCACGGCCACAACGACAAGCTGCCCTGGTACCGTGGCAAGGAATGGAGCTATTTGCGGGGAGGACTGACGACAGTGGACAGGGACTATGGGTGGATCAACAACATCCACCACGACATCGGGACACATGTCATTCACCATCTTTTCCCCCAAATCCCGCATTACCATCTAATTGAGGCGACGGAAGCAGCAAAGGGTGTGATGGGGAAATACTACAGGGAGCCGGACAAGTCTGGGCCTTTTCCCTTACACCTGTTTGGAGCGCTGTCCCGGAGCTTGAAACGCGACCACTATGTCAGCGACACCGGAGATGTGGTCTACTACCAGACCGACCCTGCTAACTAA
Protein Sequence
  • >LOC_Os07g49310.1
    MARLLLSGVAPLPLLPCRRRAIAFALPLGNVRLRLRVAAPTSRVATVEEDDNENNAPPPPCEDFDPGAAPPFGLADIRAAIPKHCWVKDPWRSMGYVLRDVVVVFALAAAAARLHSCLAWPLYWAAQGTMFWALFVLGHDCGHGSFSNNSRLNSVMGHILHSSILVPYHGWRISHRTHHQNHGHVDKDESWHPLPERLYRSLNRATRMLRFSIPFPMLAYPFYLWSRSPGKSGSHFHPSSDLFQPNERNDVLTSTACWVAMAALLAGLTFLMGPLLMLNLYFVPYWIFVMWLDFVTYLHHHGHNDKLPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKGVMGKYYREPDKSGPFPLHLFGALSRSLKRDHYVSDTGDVVYYQTDPAN*
  • >LOC_Os07g49310.2
    MARLLLSGVAPLPLLPCRRRAIAFALPLGNVRLRLRVAAPTSRVATVEEDDNENNAPPPPCEDFDPGAAPPFGLADIRAAIPKHCWVKDPWRSMGYVLRDVVVVFALAAAAARLHSCLAWPLYWAAQGTMFWALFVLGHDCGHGSFSNNSRLNSVMGHILHSSILVPYHGWRISHRTHHQNHGHVDKDESWHPLPERLYRSLNRATRMLRFSIPFPMLAYPFYLWSRSPGKSGSHFHPSSDLFQPNERNDVLTSTACWVAMAALLAGLTFLMGPLLMLNLYFVPYWIFVMWLDFVTYLHHHGHNDKLPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKGVMGKYYREPDKSGPFPLHLFGALSRSLKRDHYVSDTGDVVYYQTDPAN*