Gene Details:
- MSU gene ID: LOC_Os07g48750
- RAPdb gene ID: Os07g0686900
- Gene Symbol: OsARAF1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Arabinose content in the cell wall of transgenic rice plants overexpressing individual ARAF full-length cDNA (OsARAF1-FOX and OsARAF3-FOX) decreased 25% and 20% compared to the control and the amount of glucose increased by 28.
Function-related keywords:
Literature:
- Increase in cellulose accumulation and improvement of saccharification by overexpression of arabinofuranosidase in rice . DOI: 10.1371/journal.pone.0078269 ; PMID: 24223786
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g48750.1
ACTCCCGTCACTCCTCGAGTCCGGCGGCAGCGGCGCCGGCGCTGGCGACGGCCACGGCGAGGCGTATCGGTATTGGGGAGCGGCGGCTAGAGAGAAGGTGGTGGCGAGATGCGGCTTGGCCACCTACTCGGCGTCCGCCACCGTGGCGGTCATGCCCAAGAACAAGGCCTAGGGAAGCAACTGCGGCGACCGGCAGTGCCGCGGCGGCGGCAGCGAGCCGTATCGGGGACGCCACGGCTTGAGAGGCGGTGGCGGTGAGATGGTGAGGTTGGCCGGCTGCTCCCCACCCGCCATCGTGGCGGACATTCCAGTATAGTTTTTCGTGCGCCATCTTATCGAGGAAAATGACGGCACCTGGTTTTGCTTCCCCGCGACGTGCAGCAGTGGATGGAGAAGCATATATATGGACCGTGCATTGAGTTGGTGTGAGCTGCGAGCTCATTGAGCACAATGGCAGTGCAGAGAACAGATGCTGCCTCTTGGCTCCGTGAGCTGGTTCTTGTTTACGCCATGTGCTGGACAGTCTCACTGGGTTTTGTTGCGGGTCAAACCGGGCAGTTGAATGTCGATGCCTCGCCGCAGAATGCAAGGAAGATCCCTGATAAGATGTTCGGTATATTTTTCGAGGAGATCAACCATGCTGGGGCTGGTGGGTTGTGGGCAGAGCTTGTAAGTAACAGAGGTTTTGAGGCTGGTGGACCTAATACACCTTCAAACATTGACCCATGGCTGATAATTGGGAACGAATCAAGTATCATTGTTGGGACTGATAGGACATCCTGTTTTGAGAAAAATCCGGTGGCACTTCGGATGGAAGTTCTTTGTGATTCTAAAGGAACCAATAACTGCCCTTCTGGAGGTGTAGGAGTCTACAATCCTGGTTATTGGGGCATGAATATTGAAAGAAGAAGGGTTTATAAGGTGGGCCTGCACATTAGATCTTCAGATGCAGTATCCTTAACTGTTTCCTTGACAAGCTCCGATGGTCTGCAGAAACTGGCCTCTCACACCATAACGGCTAGCAAGAAACAGTTTGCTAAATGGACAAAGATAGAGTTTCATCTGAAATCTAGCCAAACCAATACTAATTCAAGGCTCCAGCTTACAACCAGCAAAAGTGGGGTGATTTGGCTCGACCAGGTGTCAGTTATGCCATCGGATACCTACATGTTTTGCAGACTATTCATCAGTAAACGCCAGTAGACAACTATGATTTTTTTAAGAGCAAACCCATCACTATACTGGATGGCCCATATCCTATAAGGGAAATTCCTTTTTTGCCGGGTCTATAAGGGAAATTCCTACTGAGTTGCCATCAGATTTACAGGTGTTTTATACTTATCAGTTCCCACCTTTTATTCATTGTTATGTTTTCATTTTAGGGACACGGTTTTAGGAAAGATCTCGCTTCTATGTTGGCCAATTTAAAACCTCAATTTCTTAAGTTTCCAGGTGGTAACTATGCCATGGGAAATTATCTGCGAAATGCATTTCGATGGAGTGAAACTGTGGGTCCATGGGAGGAAAGACCCGGTCACTTCAATGATGCCTGGGGATACTGGACTGATGATGGACTTGGATTCTTTGAGTTCCTTCAGCTAGCTGAAGACCTCGGTGCTTCGCCAGTATGGGTGGTCAATGATGGAGCAAGCCAAAATGAAGAGGTATCTACTGCAACAATTGCATCATTAGTGAAGGACGTGGTTGATGGCATCGAGTTTGCCAGGGGAGGGCCCAAGACTACATGGGGTTCAGTTCGTGCAGCGATGGGTCATCCACAACCCTTTAACCTTGACTATGTTTCAATAGGGAATCAAGAATGCTGGATGCTCTATTACAGAGGCAATTACCAAAAATTCTATTCCGCGATTAAAGCTGCCTATCCAGACATCAACGTCGTGTCAAGTTGTGATAAATCCACTATTTCTCCGTCCAACCCTGCCGATCTATATGATGTTCATGTTTATACCTCATCTAGTGATATGTTTTCCAGAACTAGTATGTTTGACAATACGACGCGCAGTGGACCGAAGGCAATTGTAAGTGAGTACGCTGTGACTGGAAAGGATGCTGGCAAAGGAACACTGGTAGAAGCACTAGCAGAGGCAGCATTTCTCGTTGGATTAGAAAGAAACAGCGACGTGGTAGAGATGGCAAGCTGTGCACCGCTCTTTGTAAATGACAATGATCGCAGATGGAGTCCAGACGCAATTGTGTTCAACTCATGGCAGAACTATGGATGCCCAAACTACTGGATGCTACATTTCTTCAAAGATTCATGCGGCGCAACGTTCCACCCATCAAACATTCAGATTTCCAGCTACAACCAGCTGGTTGCATCTGCCATCACTTGGCAGAATAGCAAAGACAAGAGCACTTACCTGAAAATAAAGCTAGTGAACTTTGGCAACCAAGCTGTGAATCTCAGCATATCTGTGTCTGGGCTGGATGAGGGCATCAAGAGCTCAGGGTCGAAGAAGACCGTGCTTACTTCCAGCGGGCCGCTTGATGAGAACTCATTCCAGCAGCCACAAAAGGTGGCGCCAGTGTCGAGCCCGGTGGACAACGCGAATGAGCAGATGGGCGTGTTGGTGGATCCATACTCCCTCACGTCGTTCGACCTGCTGCTGCAACCGAGCAAGCACTCGACCATATGAAAGGAGATATATACTGTAGTAGTAATAGTCTTAAGAATATTTATTAGCCTGCAAAAAGAGGGGAAAAGAGAATAAAGGAATGTTGATGGGGGGCTTGATTGCTCAGGCTAACTGCATTGCATGGAACATAATATGCCCATCAATATTCTTATTCGATTCAGCCCAAGAATAGAGAGATTTACCAGGTGAGGGTGAGTCATCCGACTCAAGAATTGTTGTTTCAATGAAATTCAGATTAGCTGACGTTGCACCGCATCTGGGATCTTGGCTGGCACACAGCATATGTAAGTATGTACATACGTGCATACCATCACCACCTGCTAGTGCTAGGAAGCTTCCTAAATTCCTTACAGTGGCAATTTCCTTGGCTTATTAGGTCGCATAAAGCTATAACATAATGGTATATTACTTGTCAATTGTATTGCTATGCAATTTTCAGATGTTTGGTGTATATATAGCTGTATACGCGTCACCTAAAGTGCACTTATTGTATTGTTCGATCGAGACACCCATATAGTTCAGGCTATTTAACTTACTGAAGGCGAAATCTCCTGG
CDS Sequence
- >LOC_Os07g48750.1
ATGTTGGCCAATTTAAAACCTCAATTTCTTAAGTTTCCAGGTGGTAACTATGCCATGGGAAATTATCTGCGAAATGCATTTCGATGGAGTGAAACTGTGGGTCCATGGGAGGAAAGACCCGGTCACTTCAATGATGCCTGGGGATACTGGACTGATGATGGACTTGGATTCTTTGAGTTCCTTCAGCTAGCTGAAGACCTCGGTGCTTCGCCAGTATGGGTGGTCAATGATGGAGCAAGCCAAAATGAAGAGGTATCTACTGCAACAATTGCATCATTAGTGAAGGACGTGGTTGATGGCATCGAGTTTGCCAGGGGAGGGCCCAAGACTACATGGGGTTCAGTTCGTGCAGCGATGGGTCATCCACAACCCTTTAACCTTGACTATGTTTCAATAGGGAATCAAGAATGCTGGATGCTCTATTACAGAGGCAATTACCAAAAATTCTATTCCGCGATTAAAGCTGCCTATCCAGACATCAACGTCGTGTCAAGTTGTGATAAATCCACTATTTCTCCGTCCAACCCTGCCGATCTATATGATGTTCATGTTTATACCTCATCTAGTGATATGTTTTCCAGAACTAGTATGTTTGACAATACGACGCGCAGTGGACCGAAGGCAATTGTAAGTGAGTACGCTGTGACTGGAAAGGATGCTGGCAAAGGAACACTGGTAGAAGCACTAGCAGAGGCAGCATTTCTCGTTGGATTAGAAAGAAACAGCGACGTGGTAGAGATGGCAAGCTGTGCACCGCTCTTTGTAAATGACAATGATCGCAGATGGAGTCCAGACGCAATTGTGTTCAACTCATGGCAGAACTATGGATGCCCAAACTACTGGATGCTACATTTCTTCAAAGATTCATGCGGCGCAACGTTCCACCCATCAAACATTCAGATTTCCAGCTACAACCAGCTGGTTGCATCTGCCATCACTTGGCAGAATAGCAAAGACAAGAGCACTTACCTGAAAATAAAGCTAGTGAACTTTGGCAACCAAGCTGTGAATCTCAGCATATCTGTGTCTGGGCTGGATGAGGGCATCAAGAGCTCAGGGTCGAAGAAGACCGTGCTTACTTCCAGCGGGCCGCTTGATGAGAACTCATTCCAGCAGCCACAAAAGGTGGCGCCAGTGTCGAGCCCGGTGGACAACGCGAATGAGCAGATGGGCGTGTTGGTGGATCCATACTCCCTCACGTCGTTCGACCTGCTGCTGCAACCGAGCAAGCACTCGACCATATGA
Protein Sequence
- >LOC_Os07g48750.1
MLANLKPQFLKFPGGNYAMGNYLRNAFRWSETVGPWEERPGHFNDAWGYWTDDGLGFFEFLQLAEDLGASPVWVVNDGASQNEEVSTATIASLVKDVVDGIEFARGGPKTTWGSVRAAMGHPQPFNLDYVSIGNQECWMLYYRGNYQKFYSAIKAAYPDINVVSSCDKSTISPSNPADLYDVHVYTSSSDMFSRTSMFDNTTRSGPKAIVSEYAVTGKDAGKGTLVEALAEAAFLVGLERNSDVVEMASCAPLFVNDNDRRWSPDAIVFNSWQNYGCPNYWMLHFFKDSCGATFHPSNIQISSYNQLVASAITWQNSKDKSTYLKIKLVNFGNQAVNLSISVSGLDEGIKSSGSKKTVLTSSGPLDENSFQQPQKVAPVSSPVDNANEQMGVLVDPYSLTSFDLLLQPSKHSTI*