Gene Details:

Functional Descriptions:

  • Using subtractive hybridization a submergence-induced gene was identified from deepwater rice, OsUsp1, that encodes a homologue of the bacterial universal stress protein family.
  • In the youngest internode of deepwater rice plants, OsUsp1 expression was very strongly induced within 1 h of submergence.
  • Based on sequence information and on expression data it is hypothesized that OsUsp1 plays a role in ethylene-mediated stress adaptation in rice.
  • The novel ethylene-regulated gene OsUsp1 from rice encodes a member of a plant protein family related to prokaryotic universal stress proteins.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os07g47620.1
    CTAAACCCAAAACCAAGGGCCGCGTCCGCGCGAGCCGAGCACCTGGGGACGCGCCGTCTCGTCACGACTCACGAGTGTGTCGCGCTCGGCCGCCACACCAGCCGCAAACCCCCACCCGCGGTTTCGCCCTCCCGCCTGCAGGCTAGATGCAGCAGCTTGCAGCCTCCCTCCTCGTGCTCCTCTCACGCTCGCAACGCCCATAAATACCCAGGTGCTCGCAGCCCACGGATCATCATCAAACGAGACAAGAGTCACAGTTCGAGTCAGAGCTATCTAACCAATCCATCCATCGAGCAATTGTTGATCCGTCTGTGAATTGTGATGGCGGCGGCGGAGGGGGAGCAGGGGAAGACGGTGGTGGTGGTCGGGGTGGACGACAGCGAGCACAGCAACTACGCGCTGGAGTGGACGATGCAGCACCTGGCGAGCGGCATGGCGGGCAGCGGCGGCGCCGAGCTCGTCATCGTCCACGCCAAGCCCTCGCCGTCCTCCGTCGTCGGCTTCGGCGCCGGCCCCGGGTCTGGAGAGGTGGTGAGATACGTGGAGGCCGACCTGCGCAAGACGGCGGAGGATGTCGTCGAGAAGGCGCGCCGCCTCTGCATCGCCAACGCGATGCACGCGTTGATCGAGGTGATCGAAGGGGAGCCCAGGTACGTGCTGTGCAACGCGGTGGAGAAGCACAGCGCGGGGTTGCTCGTCGTCGGCAGCCATGGCTACGGCGCAATCAAGAGGGCCTTCCTGGGGAGCGTCAGCGACTACTGCGCCCACCACGCGCACTGCTCCGTCATGATCGTCAAGCAACCCAAGGCCAAGCGCTCTCGTGCCGAGACCGCGTGAAAAACACCAAATTTCGGGTGTGAGCTGAGCCGAGCAATGTGTGTGTGGTTCGCTTGGGTAGCAGCAGCTTCTTGCGTTCTGTACATGGGATGATTTGTATGTGTTAGTTTCATAGGTTTTATCAGTTTATGTATCGAAATGTTTGTGCATCAGCCTATGCTTGCAGCCTTGTTATATCTTACAGAGGAAGACGTTCGTGTTTTTCGCTGATAATACACATTTTGGTAGCTGCCAGAGTATTACGCAGCCATGACCTCCCAACCTACTAGGCGCAGAGAAGAGTGTTTCTCCCAATCCTTCTGAGCTAAAAGAAGTAAAAATATCAAACAAAAGCCTCCGATCTTTTGTAACTGACGACAAAATTATCACGTGAGTGGCATGATCCAGTGGATATAAATGTATTTATTACCTGCAACTTGAGCTAGGAAGTGCATTAAGCAAACAAACGACGGAATGACTCTGTTCAACTTTCTTACCAGTACCACAATAATATACCTAAGTCAAGTACAGTGTCAAAATGAACAAAAGACAAATCCCAAGTTCAAATCTATAAATAGGCGTACAGTATCATCCAGTAATCTGAAAGAGCACTGAACGTATGAAATAGTACTTTGGAAGCGATTCAGAAGTAGTCGAGGGCGACAGATGTCAAAACGTTTCAGGACCATGATTCCTCGACACTCCGTCCCCAGAAGCACATCAGCATCATTCGGACTTGGCCTGAAAATGCGAACGGGATTAGTTTAGATTTCCATAAAAGCAAGCATGTAATGGTATAAAGAGCTATATACATCAGGAGATCGGGAACGTGATGGGCTCCTGCTTGGGCTACGTTTCTTGGGGGGGCTCCTGCTTGGGCTGCGTTTCTTGGGGCTTGCTGCATCACCATTGGCAGGCTAACCAGAAATAGGTCAGGTCAGTCACAAAAACAAATCACACAAAGTACGTTAGCAAAAACTTACAGAAGTATTTGGAGACTGAGATCTTGCTGGTGATCTGCAAAAAGTTCCAGAAATAACACGATTCAATATCCAGATTCCAGAATGCAGCTTTAACAGTTTGCTTCCAAAAAGCCTTCACGCCTCCCAATCATTGGAATGGCCAGATGCAAGCAAAAAGAGCTCATAGAAATTAGAAGAGAACAAATTCCTTAAGTTCAAAACATTC
CDS Sequence
  • >LOC_Os07g47620.1
    ATGGCGGCGGCGGAGGGGGAGCAGGGGAAGACGGTGGTGGTGGTCGGGGTGGACGACAGCGAGCACAGCAACTACGCGCTGGAGTGGACGATGCAGCACCTGGCGAGCGGCATGGCGGGCAGCGGCGGCGCCGAGCTCGTCATCGTCCACGCCAAGCCCTCGCCGTCCTCCGTCGTCGGCTTCGGCGCCGGCCCCGGGTCTGGAGAGGTGGTGAGATACGTGGAGGCCGACCTGCGCAAGACGGCGGAGGATGTCGTCGAGAAGGCGCGCCGCCTCTGCATCGCCAACGCGATGCACGCGTTGATCGAGGTGATCGAAGGGGAGCCCAGGTACGTGCTGTGCAACGCGGTGGAGAAGCACAGCGCGGGGTTGCTCGTCGTCGGCAGCCATGGCTACGGCGCAATCAAGAGGGCCTTCCTGGGGAGCGTCAGCGACTACTGCGCCCACCACGCGCACTGCTCCGTCATGATCGTCAAGCAACCCAAGGCCAAGCGCTCTCGTGCCGAGACCGCGTGA
Protein Sequence
  • >LOC_Os07g47620.1
    MAAAEGEQGKTVVVVGVDDSEHSNYALEWTMQHLASGMAGSGGAELVIVHAKPSPSSVVGFGAGPGSGEVVRYVEADLRKTAEDVVEKARRLCIANAMHALIEVIEGEPRYVLCNAVEKHSAGLLVVGSHGYGAIKRAFLGSVSDYCAHHAHCSVMIVKQPKAKRSRAETA*