Information report for OsObgC1
Gene Details
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Functional Descriptions
- Conclusion: Our findings here indicate that the OsObgC1 retains the evolutionarily biological conserved roles of prokaryotic Obg, which acts as a signaling hub that regulates DNA replication and ribosome biogenesis in chloroplast nucleoids.
Functional Keywords
Literature and News
- Functional characterization of ObgC in ribosome biogenesis during chloroplast development . DOI: 10.1111/j.1365-313X.2012.04976.x ; PMID: 22380942
- Oryza sativa ObgC1 Acts as a Key Regulator of DNA Replication and Ribosome Biogenesis in Chloroplast Nucleoids . DOI: 10.1186/s12284-021-00498-5 ; PMID: 34251486
Gene Resources
- UniProt: Q0D3S3
- EMBL: AP004570, AP008213, AP014963
- AlphaFoldDB: Q0D3S3
- EnsemblPlants: Os07t0669200-01
- Gramene: Os07t0669200-01
- KEGG: dosa:Os07g0669200
- InterPro: IPR006073, IPR006074, IPR006169
- PANTHER: PTHR11702, PTHR11702:SF44
- SUPFAM: SSF102741, SSF52540, SSF82051
- PROSITE: PS00905, PS51710, PS51881
- Gene3D: 2.70.210.12, 3.30.300.350, 3.40.50.300
- OrthoDB: Q0D3S3
- SWISS-MODEL: Q0D3S3
- Conserved Domain Database: cd01898
- eggNOG: KOG1489
Sequences
cDNA Sequence
- >LOC_Os07g47300.1
CTCGCTCAGCTCAAACAGCCACGAAATGGCGCCGGCCGTCGCCGTCGTCGCCGCCGCCGCCGCCTTCCCCTTCCGCCTCTTCTCCGCCGAGGCTCGCCGAAACACCAAGGGCTCCCGGAGCAAGCGAGGCTCAGCCAGGCCCCTCAAGCCATCCCCTCCTCCCCGCCCATCCGCGTCGTCGTCCGCCGCTGGCGGCGGCGGCGCCACCACCTTCACCAGGCTGCCGCTCCGCAACGCCCCCGCGTCCGTGGAGGTGACGCTGGACCGCTTCCCCACCGCCAATCCCGAGCCCAGAGCTTCCACTTTTACTCGCCGGAATGGCGAGCGGTTGGGCGACGACGAGGAGGATGAGGAGGAGGAGGAGGATGAGGTGGAGCTCGGACTCCGTGGGGCCACCACGTTTGCTCGGCTCCCTCTGCGGGACTCGCCGGACGGCGGTGACCTCACCATTGGGCATTTCGACGCGGGGGTGGCCCCTCAGGAGGGCCTGAGGAGTCGCGCCATTTCTCGTCAATTGGTCGAACACCTTGACGACGTAGAGGAGGAGGAGGAGGAGCAGGTTGTCAGCCGCTTGGACATCTTCGAGGGAGCAAAGGGCAGGGAAGCTCGGGCTTTCTTACCCGACGAGGACGACGAGGACGACGACGTCGTGGTGTTCGACCCAGAGTACGACGGCTACAGCGACGACGAGGAGTTCGTCGCTACTGCTGTCGAGCAGAGTCCACGAGGCGACGCCATCGCAGTTGCGGAGCTTGAAAAGCTCAAATACGACAATGACGACGACGACGACGACGACGACGAGGTTGTCGTGTTCCACCCAGACGACGACGAGGAAGTCGACGTGTTCGAGGACTACGACGACGACGAGGAGGAGGAGACGAAGGAGAAGGGTGTCCCCGCCGTGATGCGGTGCTTCGACACGGCGAAGATATACGCCAAGGCCGGCGACGGCGGGAACGGCGTGGTGGCATTCCGGCGAGAGAAGTACGTGCCGCTGGGAGGGCCCTCGGGCGGCGACGGCGGCCGCGGCGGGAACGTGTTCGTGGAGGTGGACGGCGACATGAACTCGCTGCTGCCGTTCCGCAAGTCGGTGCACTTCCGCGCCGGCCGCGGCGCGCACGGCCAGGGCAGGCAGCAGGCCGGAGCCAAGGGCGACGACGTCGTCGTGAAGGTGCCGCCGGGGACGGTGGTGCGGTCCGCCGCCGGCGACGTGGAGCTGCTCGAGCTGATGAGGCCCGGGCAGCGCGCGCTGCTTCTCCCCGGCGGCCGCGGCGGCCGCGGCAATGCCGCATTCAAGTCCGGCACAAATAAGGCGCCAAGGATTGCAGAGAAAGGGGAGAAAGGTCCAGAAATGTGGATAGATTTGGAGCTGAAGCTGGTTGCTGATGTGGGGATTGTAGGCGCCCCAAATGCTGGAAAGAGCACCCTTCTGACTGCTATTAGTGCAGCAAAGCCAACTATAGCCAATTACCCTTTTACGACATTATTACCAAATCTTGGAGTGGTCTCATTGGATTTTGATGCTACAATGGTAGTCGCAGACCTTCCTGGATTGCTGGAAGGTGCTCACCGTGGATATGGCTTGGGGCATGAGTTTTTAAGGCATAGTGAGAGATGTTCAGTGTTGGTTCATGTTGTCGACGGCTCAGGAGAACAACCTGAATATGAGTTTGAGGCTGTTCGTTTAGAACTGGAGCTATTTAGCCCATCATTGGTTGACAAACCTTATATAGTGGTGTACAATAAGATGGATCTTCCAGAGGCATCGGAAAGATGGAATAAGTTTCAGGAGAAGCTACAGGCTGAAGGAATTGAGCCCTATTGCATCAGTGCAATGAATAGGCAAGGAACAGAGGATGTTGTTCTTGCTGCATACAAGGTTCTACAGAAAGATAGGCAAAGAATGAAAGATGACGAAGAATGGAATGGCCCTGAAAATCTGAATCATGTGGCTGATGCAATAAAAAGGGAAAGGAGAGCTCCCATGAACGAATTTGAGATTTTTCATGATAAGGGCACGAATACATGGAACGTTGTTGGAGCTGGAATTGAACGTTTTGTTCAGATGACTAATTGGCAGTATTCAGAATCCTTGAAACGATTTCAGCATGCTTTAGAGGCATGTGGTGTCAACAAAACTCTAATCAAACGTGGAGTTAAAGAGGGAGACACGGTAGTTGTTGGTGAGATGGAAATGGTTTGGACAGATGAGCCTAGTAAGACCAGGTCATCAAAGACAATGAACTCAAAAGATGACTCTGTCAGATGGCCTGAATTTGGCTAGATCAAGGCTCAAGCAATGGTTCTGTGTCGCAGCAGAGGCGATTTTCACTGAAATGTTTGCACATGCTTACAATAAAATGCTGCACTATGACAACAAAAAAACTACTAGTCATCACAACAGCTAGTTACACCCAGCCCAAATAAAAGGAATACTATTTTGTGTTACCTTCAGAATAGTGATGTATCACACAGCTTCGCCTACATGCTTTGAAAGTTGGATTATGCAGGAGTGCTATGTACTACCTTTTGTGATAGTAGATATTTGTAGATGAGATTTAGGTATTCTAAAATGATGTACGAAATAGTTTCTTCAGCAAGATTGTATAAATGTTCACATTGATTATTAATGGCTTATACGACCGAAGAAAGACAATTGCCGTTGCATCG
CDS Sequence
- >LOC_Os07g47300.1
ATGGCGCCGGCCGTCGCCGTCGTCGCCGCCGCCGCCGCCTTCCCCTTCCGCCTCTTCTCCGCCGAGGCTCGCCGAAACACCAAGGGCTCCCGGAGCAAGCGAGGCTCAGCCAGGCCCCTCAAGCCATCCCCTCCTCCCCGCCCATCCGCGTCGTCGTCCGCCGCTGGCGGCGGCGGCGCCACCACCTTCACCAGGCTGCCGCTCCGCAACGCCCCCGCGTCCGTGGAGGTGACGCTGGACCGCTTCCCCACCGCCAATCCCGAGCCCAGAGCTTCCACTTTTACTCGCCGGAATGGCGAGCGGTTGGGCGACGACGAGGAGGATGAGGAGGAGGAGGAGGATGAGGTGGAGCTCGGACTCCGTGGGGCCACCACGTTTGCTCGGCTCCCTCTGCGGGACTCGCCGGACGGCGGTGACCTCACCATTGGGCATTTCGACGCGGGGGTGGCCCCTCAGGAGGGCCTGAGGAGTCGCGCCATTTCTCGTCAATTGGTCGAACACCTTGACGACGTAGAGGAGGAGGAGGAGGAGCAGGTTGTCAGCCGCTTGGACATCTTCGAGGGAGCAAAGGGCAGGGAAGCTCGGGCTTTCTTACCCGACGAGGACGACGAGGACGACGACGTCGTGGTGTTCGACCCAGAGTACGACGGCTACAGCGACGACGAGGAGTTCGTCGCTACTGCTGTCGAGCAGAGTCCACGAGGCGACGCCATCGCAGTTGCGGAGCTTGAAAAGCTCAAATACGACAATGACGACGACGACGACGACGACGACGAGGTTGTCGTGTTCCACCCAGACGACGACGAGGAAGTCGACGTGTTCGAGGACTACGACGACGACGAGGAGGAGGAGACGAAGGAGAAGGGTGTCCCCGCCGTGATGCGGTGCTTCGACACGGCGAAGATATACGCCAAGGCCGGCGACGGCGGGAACGGCGTGGTGGCATTCCGGCGAGAGAAGTACGTGCCGCTGGGAGGGCCCTCGGGCGGCGACGGCGGCCGCGGCGGGAACGTGTTCGTGGAGGTGGACGGCGACATGAACTCGCTGCTGCCGTTCCGCAAGTCGGTGCACTTCCGCGCCGGCCGCGGCGCGCACGGCCAGGGCAGGCAGCAGGCCGGAGCCAAGGGCGACGACGTCGTCGTGAAGGTGCCGCCGGGGACGGTGGTGCGGTCCGCCGCCGGCGACGTGGAGCTGCTCGAGCTGATGAGGCCCGGGCAGCGCGCGCTGCTTCTCCCCGGCGGCCGCGGCGGCCGCGGCAATGCCGCATTCAAGTCCGGCACAAATAAGGCGCCAAGGATTGCAGAGAAAGGGGAGAAAGGTCCAGAAATGTGGATAGATTTGGAGCTGAAGCTGGTTGCTGATGTGGGGATTGTAGGCGCCCCAAATGCTGGAAAGAGCACCCTTCTGACTGCTATTAGTGCAGCAAAGCCAACTATAGCCAATTACCCTTTTACGACATTATTACCAAATCTTGGAGTGGTCTCATTGGATTTTGATGCTACAATGGTAGTCGCAGACCTTCCTGGATTGCTGGAAGGTGCTCACCGTGGATATGGCTTGGGGCATGAGTTTTTAAGGCATAGTGAGAGATGTTCAGTGTTGGTTCATGTTGTCGACGGCTCAGGAGAACAACCTGAATATGAGTTTGAGGCTGTTCGTTTAGAACTGGAGCTATTTAGCCCATCATTGGTTGACAAACCTTATATAGTGGTGTACAATAAGATGGATCTTCCAGAGGCATCGGAAAGATGGAATAAGTTTCAGGAGAAGCTACAGGCTGAAGGAATTGAGCCCTATTGCATCAGTGCAATGAATAGGCAAGGAACAGAGGATGTTGTTCTTGCTGCATACAAGGTTCTACAGAAAGATAGGCAAAGAATGAAAGATGACGAAGAATGGAATGGCCCTGAAAATCTGAATCATGTGGCTGATGCAATAAAAAGGGAAAGGAGAGCTCCCATGAACGAATTTGAGATTTTTCATGATAAGGGCACGAATACATGGAACGTTGTTGGAGCTGGAATTGAACGTTTTGTTCAGATGACTAATTGGCAGTATTCAGAATCCTTGAAACGATTTCAGCATGCTTTAGAGGCATGTGGTGTCAACAAAACTCTAATCAAACGTGGAGTTAAAGAGGGAGACACGGTAGTTGTTGGTGAGATGGAAATGGTTTGGACAGATGAGCCTAGTAAGACCAGGTCATCAAAGACAATGAACTCAAAAGATGACTCTGTCAGATGGCCTGAATTTGGCTAG
Protein Sequence
- >LOC_Os07g47300.1
MAPAVAVVAAAAAFPFRLFSAEARRNTKGSRSKRGSARPLKPSPPPRPSASSSAAGGGGATTFTRLPLRNAPASVEVTLDRFPTANPEPRASTFTRRNGERLGDDEEDEEEEEDEVELGLRGATTFARLPLRDSPDGGDLTIGHFDAGVAPQEGLRSRAISRQLVEHLDDVEEEEEEQVVSRLDIFEGAKGREARAFLPDEDDEDDDVVVFDPEYDGYSDDEEFVATAVEQSPRGDAIAVAELEKLKYDNDDDDDDDDEVVVFHPDDDEEVDVFEDYDDDEEEETKEKGVPAVMRCFDTAKIYAKAGDGGNGVVAFRREKYVPLGGPSGGDGGRGGNVFVEVDGDMNSLLPFRKSVHFRAGRGAHGQGRQQAGAKGDDVVVKVPPGTVVRSAAGDVELLELMRPGQRALLLPGGRGGRGNAAFKSGTNKAPRIAEKGEKGPEMWIDLELKLVADVGIVGAPNAGKSTLLTAISAAKPTIANYPFTTLLPNLGVVSLDFDATMVVADLPGLLEGAHRGYGLGHEFLRHSERCSVLVHVVDGSGEQPEYEFEAVRLELELFSPSLVDKPYIVVYNKMDLPEASERWNKFQEKLQAEGIEPYCISAMNRQGTEDVVLAAYKVLQKDRQRMKDDEEWNGPENLNHVADAIKRERRAPMNEFEIFHDKGTNTWNVVGAGIERFVQMTNWQYSESLKRFQHALEACGVNKTLIKRGVKEGDTVVVGEMEMVWTDEPSKTRSSKTMNSKDDSVRWPEFG*