Information report for OsGZF1
Gene Details
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Functional Descriptions
- In this study, we describe a zinc finger gene of the Cys3His1 (CCCH or C3H) class, named OsGZF1, which was identified in a yeast one-hybrid screening using the core promoter region of GluB-1 as bait and cDNA expression libraries prepared from developing rice panicles and grains as prey.
- Furthermore, down-regulation of OsGZF1 by an RNAi approach increased grain nitrogen concentration.
- We propose that OsGZF1 has a function in regulating the GluB-1 promoter and controls accumulation of glutelins during grain development.
- Functions of the CCCH type zinc finger protein OsGZF1 in regulation of the seed storage protein GluB-1 from rice.
Literature and News
Gene Resources
- UniProt: Q8H3R4
- EMBL: AP014963
- AlphaFoldDB: Q8H3R4
- EnsemblPlants: Os07t0668600-01, Os07t0668600-02
- Gramene: Os07t0668600-01, Os07t0668600-02
- KEGG: osa:4344226
Homologs
- Actinidia chinensis: Achn319461
- Beta vulgaris: Bv3_068100_ykce.t1
- Brachypodium distachyon: Bradi1g18482.1.p
- Citrullus lanatus: Cla010708
- Cucumis melo: MELO3C017641P1
- Cucumis sativus: Cucsa.094060.1
- Nicotiana tabacum: XP_016491466.1, XP_016491467.1
- Panicum virgatum: Pavir.2NG626100.5.p, Pavir.2NG626100.4.p, Pavir.2NG626100.3.p, Pavir.2NG626100.2.p, Pavir.2NG626100.1.p, Pavir.2KG571400.1.p
- Ziziphus jujuba: XP_015877684.1
Sequences
cDNA Sequence
- >LOC_Os07g47240.1
ATATGCACAACATTCATACCAATTAATGTTTAGTTTCTAACATGCATCTAGCCTAGCATTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAGCACATTGCAAACACAGGCTTAGCTTGCATATATACATTTTTTTGTGGCCATGGCTATGCATCATATGCATGATGTTTTTGCACAGACGACGAGCATCATCGGCCATGAAGAAGAAGAAGTAACCATTGACCCGACCAAGTGGGGCGCATGGGCTCATCGTGGCCACCGTCTCTGGGCATCCATGTCGGAGGATTTCTGGATACACGTCTACAAGGTGCAGCGGTGCCCGCGGTCGTCCAGCCACGACTGGACGTCGTGCCCCTACGCGCACAAGGGCGAGCGCGCGCGGCGGCGCGACACGCGGCGCTTCGCGTACGCCGCCGTGTCGTGCCCGGACTACCGCCCGCGCGAGGCGGCGCCGGGCGCCGTGCCCAGCTGCGCCCACGGCCTCCGTTGCCGCTACGCCCATGGTGTCTTCGAGCTATGGCTGCACCCGTCCCGCTTCCGCACGCGCATGTGCTCCGCCGGCACGCGGTGCCCTCGCCGGATCTGCTTCTTTGCCCACTCCGCCGCCGAGCTTAGGGACGATCCCAACTCCATTGCGTCAGCCATCCTCACACCGATGCCAATGCCGATGCCGATGTCGATACCGATGCGGACTCCTGATGCTGATCATCATCCCAGGGTTTCTGCTATGCGTGATCAGCTTGATCTAATCGAAGAGGCCATGAGAAATAGGCTTCGCTTGTATTCTAATGCTAATGCTAATGCTAATGTTGGTTCTTCTTCTGCTACCGCTGTTGCTACCACCACCATACCGGTGTCAACATTGGCAAATGGTGAGGGTTCAACTGGAAAAAGGTGTGGTTGCCGCCGTTGTGTGGAGGAGGAAGACGCTTTGCTCAATGGCTACCCACATTATGATCTCATCATGGACTTGGTGGATGAATAGATGGGTGTGTTACATACTCTTTTGCGATGCATTTGAAGGAGATGACACAAGCTCGCAAATTGCCAAAATGGAGAAACTTGAGCGATTTGGGATGCTTTAAAAGTTGACACCCTATACATATGGTGCTGGATCATGTATCATATTTATGCCAATTTTTACTAGAAAAGTGTATGCGTGTGCATGCATATATAAAAATATTTATGATATTGTCGTCGGGCTAGCTCCGAGCCTATATATCAAGTGGTATCATTTTCTTTAC
CDS Sequence
- >LOC_Os07g47240.1
ATGGCTATGCATCATATGCATGATGTTTTTGCACAGACGACGAGCATCATCGGCCATGAAGAAGAAGAAGTAACCATTGACCCGACCAAGTGGGGCGCATGGGCTCATCGTGGCCACCGTCTCTGGGCATCCATGTCGGAGGATTTCTGGATACACGTCTACAAGGTGCAGCGGTGCCCGCGGTCGTCCAGCCACGACTGGACGTCGTGCCCCTACGCGCACAAGGGCGAGCGCGCGCGGCGGCGCGACACGCGGCGCTTCGCGTACGCCGCCGTGTCGTGCCCGGACTACCGCCCGCGCGAGGCGGCGCCGGGCGCCGTGCCCAGCTGCGCCCACGGCCTCCGTTGCCGCTACGCCCATGGTGTCTTCGAGCTATGGCTGCACCCGTCCCGCTTCCGCACGCGCATGTGCTCCGCCGGCACGCGGTGCCCTCGCCGGATCTGCTTCTTTGCCCACTCCGCCGCCGAGCTTAGGGACGATCCCAACTCCATTGCGTCAGCCATCCTCACACCGATGCCAATGCCGATGCCGATGTCGATACCGATGCGGACTCCTGATGCTGATCATCATCCCAGGGTTTCTGCTATGCGTGATCAGCTTGATCTAATCGAAGAGGCCATGAGAAATAGGCTTCGCTTGTATTCTAATGCTAATGCTAATGCTAATGTTGGTTCTTCTTCTGCTACCGCTGTTGCTACCACCACCATACCGGTGTCAACATTGGCAAATGGTGAGGGTTCAACTGGAAAAAGGTGTGGTTGCCGCCGTTGTGTGGAGGAGGAAGACGCTTTGCTCAATGGCTACCCACATTATGATCTCATCATGGACTTGGTGGATGAATAG
Protein Sequence
- >LOC_Os07g47240.1
MAMHHMHDVFAQTTSIIGHEEEEVTIDPTKWGAWAHRGHRLWASMSEDFWIHVYKVQRCPRSSSHDWTSCPYAHKGERARRRDTRRFAYAAVSCPDYRPREAAPGAVPSCAHGLRCRYAHGVFELWLHPSRFRTRMCSAGTRCPRRICFFAHSAAELRDDPNSIASAILTPMPMPMPMSIPMRTPDADHHPRVSAMRDQLDLIEEAMRNRLRLYSNANANANVGSSSATAVATTTIPVSTLANGEGSTGKRCGCRRCVEEEDALLNGYPHYDLIMDLVDE*