Gene Details:
- MSU gene ID: LOC_Os07g44330
- RAPdb gene ID: Os07g0637300
- Gene Symbol: OsPDK1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsPDK1 was expressed in leaf blade and leaf sheath but not in callus and root, while OsPDK2 was expressed constitutively in all tissues examined.
- These results suggest that gibberellin modulates the activity of mtPDC by regulating OsPDK1 expression and subsequently controlling plant growth and development.
- Maximum expression of OsPDK1 in leaf sheath was detected by Northern blot analysis when seedlings were treated with 5 microM GA3 for 24 h.
- The beta-glucuronidase (GUS) reporter gene, driven by a 2,067 bp OsPDK1 promoter region fragment, was mainly expressed in the aleurone layer of germinating seed and leaf sheath.
- OsPDK1 was identified as a gibberellin-up-regulated gene using a cDNA microarray.
Function-related keywords:
Literature:
- Gibberellin regulates mitochondrial pyruvate dehydrogenase activity in rice . DOI: 10.1093/pcp/pci241 ; PMID: 16352697
Related News:
Gene Resources:
- NCBI ID: AY026039
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os07g44330.1
CACACCTCTCCTCTGTTCTTCGCTTCCTCCGCTTTATAAGCGCGCGAGCTCGGCTCGGCCTCCCATGCCGCGCTCGTCGATCCCCAAATCTCGCCGCCGGTGAAGGAGGTAGAAGTGGAGGTGGAGGTGGGGGGAGGATGGCGTCGGAGCCGGTGGCGAGGGCGGTGGCGGAGGAGGTGGGGAGGTGGGGGAGCATGAAGCAGACGGGGGTGAGCCTGCGCTACATGATGGAGTTCGGGTCGCGCCCCACGGAGCGGAACCTGCTGCTCTCCGCGCAGTTCCTGCAGAAGGAGCTCCCAATCCGGATCGCGCGCCGCGCGCTCGAGCTCGAGTCCCTCCCCTTCGGCCTCTCCCGCAAGCCCGCCATCCTCAAGGTAATTCTGGGGGAGTGGAGTGTGAATAAGGTGCGGGATTGGTACTTGGACTCTTTCCGCGACATCAGATACTTTCCAGAAGTGAGGAATAGGAACGACGAGCTCGCTTTTACGCAGATGATCAAGATGATCAAAGTACGCCACAATAATGTGGTTCCAACGATGGCACTGGGAGTTCAACAGCTCAAGAACGAGCAGTATCGCACAAGGAAGATCCCCACTGCATTTGACGAGATCCACGAGTTTCTTGACAGATTCTACATGTCAAGGATTGGGATCCGCATGCTTATAGGGCAGCATGTGGCTTTGCATGATCCTGACCCAGAGCCTGGCGTCATAGGCCTCATTAATACAGAATTGTCCCCTATACAGGTGGCTCAAGCTGCCAGTGAAGATGCCCGTTCTATTTGTTTGAGGGAATATGGATCAGCTCCTGAGATTGACATCTATGGAGACCCAACTTTTACATTTCCATATGTTTCATCACATCTACATCTCATGCTATTTGAATTGGTGAAGAACTCCTTGCGTGCAGTACAGGAACGATATATGAATTCCGATAAAGATGTTCCTCCAGTTAGAATTATCGTTGCTGATGGGGCAGAGGATGTAACTATCAAGGTTAGTGATGAAGGTGGTGGAATACCAAGGAGCGGCCTTCCAAGAATTTTCACATATCTATATAGCACTGCAAAGAATCCACCTGATATGGATTGCCCTAGTGAAGGAGTAACTATGGCTGGATATGGCTATGGTCTTCCAATCAGTCGCCTGTATGCTCGATATTTTGGTGGTGACCTGCAAATCATCTCTATGGAAGGATACGGCACCGATGCTTACCTGCACTTGTCACGGTTGGGAGATTCGGAGGAGCCCTTGCCTTGAAGGCTTCCCTGTCCTGATACCATCTCTGTAATTAATTAGGTTGCTCTTGTCTCTTGTAATTCCTGGGCTGGTTTGGAATATTGTTTTCAAGTGCCAGCCACCTATAGCTGTTAACCTTCTACAGTAGTTGCCACGGTTTCATCACTTCAGCTTTGCAGCAGCATGAGCACAAGTCTCCTCTCTCTCTTTCTCTCTCTCTCTACTCTGCCTTGTAGCGAAATGTAGAATTCTTCTGCCACGCACATGGCATTGTTCATACTTCTCGTACTTGTTGAGCTTCATGGCTTGGTGCAGATTGTACTTTGATAGTTATCAGTAGTAAGCTAACTTCATCAAGTGAATGTCTTTTGTTCTACATATAGTTTGCAGCTTTTGAAACTTCTCTGTCCATTGATCTGGGGAGAAAACCTCGTGCTGTCGGTTCTGGAATTTTGCAAATCAAGTATGCACCTAGGGGTTATAAAAGCTTGGTGTTGAGTTTAGCACCAACTAGTTCATCCTAAAGTTAACAAAGCATGAACTATTTTCTGTTTTTTTTTTCGAAACATGATAAAATATATTAAGGGAGAATAGCACATTTGGTCCCTAAA - >LOC_Os07g44330.2
CACACCTCTCCTCTGTTCTTCGCTTCCTCCGCTTTATAAGCGCGCGAGCTCGGCTCGGCCTCCCATGCCGCGCTCGTCGATCCCCAAATCTCGCCGCCGGTGAAGGAGGTAGAAGTGGAGGTGGAGGTGGGGGGAGGATGGCGTCGGAGCCGGTGGCGAGGGCGGTGGCGGAGGAGGTGGGGAGGTGGGGGAGCATGAAGCAGACGGGGGTGAGCCTGCGCTACATGATGGAGTTCGGGTCGCGCCCCACGGAGCGGAACCTGCTGCTCTCCGCGCAGTTCCTGCAGAAGGAGCTCCCAATCCGGATCGCGCGCCGCGCGCTCGAGCTCGAGTCCCTCCCCTTCGGCCTCTCCCGCAAGCCCGCCATCCTCAAGGTAATTCTGGGGGAGTGGAGTGTGAATAAGGTGCGGGATTGGTACTTGGACTCTTTCCGCGACATCAGATACTTTCCAGAAGTGAGGAATAGGAACGACGAGCTCGCTTTTACGCAGATGATCAAGATGATCAAAGTACGCCACAATAATGTGGTTCCAACGATGGCACTGGGAGTTCAACAGCTCAAGAACGAGCAGTATCGCACAAGGAAGATCCCCACTGCATTTGACGAGATCCACGAGTTTCTTGACAGATTCTACATGTCAAGGATTGGGATCCGCATGCTTATAGGGCAGCATGTGGCTTTGCATGATCCTGACCCAGAGCCTGGCGTCATAGGCCTCATTAATACAGAATTGTCCCCTATACAGGTGGCTCAAGCTGCCAGTGAAGATGCCCGTTCTATTTGTTTGAGGGAATATGGATCAGCTCCTGAGATTGACATCTATGGAGACCCAACTTTTACATTTCCATATGTTTCATCACATCTACATCTCATGCTATTTGAATTGGTGAAGAACTCCTTGCGTGCAGTACAGGAACGATATATGAATTCCGATAAAGATGTTCCTCCAGTTAGAATTATCGTTGCTGATGGGGCAGAGGATGTAACTATCAAGGTTAGTGATGAAGGTGGTGGAATACCAAGGAGCGGCCTTCCAAGAATTTTCACATATCTATATAGCACTGCAAAGAATCCACCTGATATGGATTGCCCTAGTGAAGGAGTAACTATGGCTGGATATGGCTATGGTCTTCCAATCAGTCGCCTGTATGCTCGATATTTTGGTGGTGACCTGCAAATCATCTCTATGGAAGGATACGGCACCGATGCTTACCTGCACTTGTCACGGTTGGGAGATTCGGAGGAGCCCTTGCCTTGAAGGCTTCCCTGTCCTGATACCATCTCTGTAATTAATTAGGTTGCTCTTGTCTCTTGTAATTCCTGGGCTGGTTTGGAATATTGTTTTCAAGTGCCAGCCACCTATAGCTGTTAACCTTCTACAGTAGTTGCCACGGTTTCATCACTTCAGCTTTGCAGCAGCATGAGCACAAGTCTCCTCTCTCTCTTTCTCTCTCTCTCTACTCTGCCTTGTAGCGAAATGTAGAATTCTTCTGCCACGCACATGGCATTGTTCATACTTCTCGTACTTGTTGAGCTTCATGGCTTGGTGCAGATTGTACTTTGATAGTTATCAGTAGTAAGCTAACTTCATCAAGTGAATGTCTTTTGTTCTACATATAGTTTGCAGCTTTTGAAACTTCTCTGTCCATTGATCTGGGGAGAAAACCTCGTGCTGTCGGTTCTGGAATTTTGCAAATCAAGTATGCACCTAGGGGTTATAAAAGCTTGGTGTTGAGTTTAGCACCAACTAGTTCATCCTAAAGTTAACAAAGCATGAACTATTTTCTGTTTTTTTTTTCGAAACATGATAAAATATATTAAGGGAGAATAGCACATTTGGTCCCTAAA - >LOC_Os07g44330.3
CACACCTCTCCTCTGTTCTTCGCTTCCTCCGCTTTATAAGCGCGCGAGCTCGGCTCGGCCTCCCATGCCGCGCTCGTCGATCCCCAAATCTCGCCGCCGGTGAAGGAGGTAGAAGTGGAGGTGGAGGTGGGGGGAGGATGGCGTCGGAGCCGGTGGCGAGGGCGGTGGCGGAGGAGGTGGGGAGGTGGGGGAGCATGAAGCAGACGGGGGTGAGCCTGCGCTACATGATGGAGTTCGGGTCGCGCCCCACGGAGCGGAACCTGCTGCTCTCCGCGCAGTTCCTGCAGAAGGAGCTCCCAATCCGGATCGCGCGCCGCGCGCTCGAGCTCGAGTCCCTCCCCTTCGGCCTCTCCCGCAAGCCCGCCATCCTCAAGGTAATTCTGGGGGAGTGGAGTGTGAATAAGGTGCGGGATTGGTACTTGGACTCTTTCCGCGACATCAGATACTTTCCAGAAGTGAGGAATAGGAACGACGAGCTCGCTTTTACGCAGATGATCAAGATGATCAAAGTACGCCACAATAATGTGGTTCCAACGATGGCACTGGGAGTTCAACAGCTCAAGAACGAGCAGTATCGCACAAGGAAGATCCCCACTGCATTTGACGAGATCCACGAGTTTCTTGACAGATTCTACATGTCAAGGATTGGGATCCGCATGCTTATAGGGCAGCATGTGGCTTTGCATGATCCTGACCCAGAGCCTGGCGTCATAGGCCTCATTAATACAGAATTGTCCCCTATACAGGTGGCTCAAGCTGCCAGTGAAGATGCCCGTTCTATTTGTTTGAGGGAATATGGATCAGCTCCTGAGATTGACATCTATGGAGACCCAACTTTTACATTTCCATATGTTTCATCACATCTACATCTCATGCTATTTGAATTGGTGAAGAACTCCTTGCGTGCAGTACAGGAACGATATATGAATTCCGATAAAGATGTTCCTCCAGTTAGAATTATCGTTGCTGATGGGGCAGAGGATGTAACTATCAAGGTTAGTGATGAAGGTGGTGGAATACCAAGGAGCGGCCTTCCAAGAATTTTCACATATCTATATAGCACTGCAAAGAATCCACCTGATATGGATTGCCCTAGTGAAGGAGTAACTATGGCTGGATATGGCTATGGTCTTCCAATCAGTCGCCTGTATGCTCGATATTTTGGTGGTGACCTGCAAATCATCTCTATGGAAGGATACGGCACCGATGCTTACCTGCACTTGTCACGGTTGGGAGATTCGGAGGAGCCCTTGCCTTGAAGGCTTCCCTGTCCTGATACCATCTCTGTAATTAATTAGGTTGCTCTTGTCTCTTGTAATTCCTGGGCTGGTTTGGAATATTGTTTTCAAGTGCCAGCCACCTATAGCTGTTAACCTTCTACAGTAGTTGCCACGGTTTCATCACTTCAGCTTTGCAGCAGCATGAGCACAAGTCTCCTCTCTCTCTTTCTCTCTCTCTCTACTCTGCCTTGTAGCGAAATGTAGAATTCTTCTGCCACGCACATGGCATTGTTCATACTTCTCGTACTTGTTGAGCTTCATGGCTTGGTGCAGATTGTACTTTGATAGTTATCAGTAGTAAGCTAACTTCATCAAGTGAATGTCTTTTGTTCTACATATAGTTTGCAGCTTTTGAAACTTCTCTGTCCATTGATCTGGGGAGAAAACCTCGTGCTGTCGGTTCTGGAATTTTGCAAATCAAGTATGCACCTAGGGGTTATAAAAGCTTGGTGTTGAGTTTAGCACCAACTAGTTCATCCTAAAGTTAACAAAGCATGAACTATTTTCTGTTTTTTTTTTCGAAACATGATAAAATATATTAAGGGAGAATAGCACATTTGGTCCCTAAA
CDS Sequence
- >LOC_Os07g44330.1
ATGGCGTCGGAGCCGGTGGCGAGGGCGGTGGCGGAGGAGGTGGGGAGGTGGGGGAGCATGAAGCAGACGGGGGTGAGCCTGCGCTACATGATGGAGTTCGGGTCGCGCCCCACGGAGCGGAACCTGCTGCTCTCCGCGCAGTTCCTGCAGAAGGAGCTCCCAATCCGGATCGCGCGCCGCGCGCTCGAGCTCGAGTCCCTCCCCTTCGGCCTCTCCCGCAAGCCCGCCATCCTCAAGGTAATTCTGGGGGAGTGGAGTGTGAATAAGGTGCGGGATTGGTACTTGGACTCTTTCCGCGACATCAGATACTTTCCAGAAGTGAGGAATAGGAACGACGAGCTCGCTTTTACGCAGATGATCAAGATGATCAAAGTACGCCACAATAATGTGGTTCCAACGATGGCACTGGGAGTTCAACAGCTCAAGAACGAGCAGTATCGCACAAGGAAGATCCCCACTGCATTTGACGAGATCCACGAGTTTCTTGACAGATTCTACATGTCAAGGATTGGGATCCGCATGCTTATAGGGCAGCATGTGGCTTTGCATGATCCTGACCCAGAGCCTGGCGTCATAGGCCTCATTAATACAGAATTGTCCCCTATACAGGTGGCTCAAGCTGCCAGTGAAGATGCCCGTTCTATTTGTTTGAGGGAATATGGATCAGCTCCTGAGATTGACATCTATGGAGACCCAACTTTTACATTTCCATATGTTTCATCACATCTACATCTCATGCTATTTGAATTGGTGAAGAACTCCTTGCGTGCAGTACAGGAACGATATATGAATTCCGATAAAGATGTTCCTCCAGTTAGAATTATCGTTGCTGATGGGGCAGAGGATGTAACTATCAAGGTTAGTGATGAAGGTGGTGGAATACCAAGGAGCGGCCTTCCAAGAATTTTCACATATCTATATAGCACTGCAAAGAATCCACCTGATATGGATTGCCCTAGTGAAGGAGTAACTATGGCTGGATATGGCTATGGTCTTCCAATCAGTCGCCTGTATGCTCGATATTTTGGTGGTGACCTGCAAATCATCTCTATGGAAGGATACGGCACCGATGCTTACCTGCACTTGTCACGGTTGGGAGATTCGGAGGAGCCCTTGCCTTGA - >LOC_Os07g44330.2
ATGGCGTCGGAGCCGGTGGCGAGGGCGGTGGCGGAGGAGGTGGGGAGGTGGGGGAGCATGAAGCAGACGGGGGTGAGCCTGCGCTACATGATGGAGTTCGGGTCGCGCCCCACGGAGCGGAACCTGCTGCTCTCCGCGCAGTTCCTGCAGAAGGAGCTCCCAATCCGGATCGCGCGCCGCGCGCTCGAGCTCGAGTCCCTCCCCTTCGGCCTCTCCCGCAAGCCCGCCATCCTCAAGGTAATTCTGGGGGAGTGGAGTGTGAATAAGGTGCGGGATTGGTACTTGGACTCTTTCCGCGACATCAGATACTTTCCAGAAGTGAGGAATAGGAACGACGAGCTCGCTTTTACGCAGATGATCAAGATGATCAAAGTACGCCACAATAATGTGGTTCCAACGATGGCACTGGGAGTTCAACAGCTCAAGAACGAGCAGTATCGCACAAGGAAGATCCCCACTGCATTTGACGAGATCCACGAGTTTCTTGACAGATTCTACATGTCAAGGATTGGGATCCGCATGCTTATAGGGCAGCATGTGGCTTTGCATGATCCTGACCCAGAGCCTGGCGTCATAGGCCTCATTAATACAGAATTGTCCCCTATACAGGTGGCTCAAGCTGCCAGTGAAGATGCCCGTTCTATTTGTTTGAGGGAATATGGATCAGCTCCTGAGATTGACATCTATGGAGACCCAACTTTTACATTTCCATATGTTTCATCACATCTACATCTCATGCTATTTGAATTGGTGAAGAACTCCTTGCGTGCAGTACAGGAACGATATATGAATTCCGATAAAGATGTTCCTCCAGTTAGAATTATCGTTGCTGATGGGGCAGAGGATGTAACTATCAAGGTTAGTGATGAAGGTGGTGGAATACCAAGGAGCGGCCTTCCAAGAATTTTCACATATCTATATAGCACTGCAAAGAATCCACCTGATATGGATTGCCCTAGTGAAGGAGTAACTATGGCTGGATATGGCTATGGTCTTCCAATCAGTCGCCTGTATGCTCGATATTTTGGTGGTGACCTGCAAATCATCTCTATGGAAGGATACGGCACCGATGCTTACCTGCACTTGTCACGGTTGGGAGATTCGGAGGAGCCCTTGCCTTGA - >LOC_Os07g44330.3
ATGGCGTCGGAGCCGGTGGCGAGGGCGGTGGCGGAGGAGGTGGGGAGGTGGGGGAGCATGAAGCAGACGGGGGTGAGCCTGCGCTACATGATGGAGTTCGGGTCGCGCCCCACGGAGCGGAACCTGCTGCTCTCCGCGCAGTTCCTGCAGAAGGAGCTCCCAATCCGGATCGCGCGCCGCGCGCTCGAGCTCGAGTCCCTCCCCTTCGGCCTCTCCCGCAAGCCCGCCATCCTCAAGGTAATTCTGGGGGAGTGGAGTGTGAATAAGGTGCGGGATTGGTACTTGGACTCTTTCCGCGACATCAGATACTTTCCAGAAGTGAGGAATAGGAACGACGAGCTCGCTTTTACGCAGATGATCAAGATGATCAAAGTACGCCACAATAATGTGGTTCCAACGATGGCACTGGGAGTTCAACAGCTCAAGAACGAGCAGTATCGCACAAGGAAGATCCCCACTGCATTTGACGAGATCCACGAGTTTCTTGACAGATTCTACATGTCAAGGATTGGGATCCGCATGCTTATAGGGCAGCATGTGGCTTTGCATGATCCTGACCCAGAGCCTGGCGTCATAGGCCTCATTAATACAGAATTGTCCCCTATACAGGTGGCTCAAGCTGCCAGTGAAGATGCCCGTTCTATTTGTTTGAGGGAATATGGATCAGCTCCTGAGATTGACATCTATGGAGACCCAACTTTTACATTTCCATATGTTTCATCACATCTACATCTCATGCTATTTGAATTGGTGAAGAACTCCTTGCGTGCAGTACAGGAACGATATATGAATTCCGATAAAGATGTTCCTCCAGTTAGAATTATCGTTGCTGATGGGGCAGAGGATGTAACTATCAAGGTTAGTGATGAAGGTGGTGGAATACCAAGGAGCGGCCTTCCAAGAATTTTCACATATCTATATAGCACTGCAAAGAATCCACCTGATATGGATTGCCCTAGTGAAGGAGTAACTATGGCTGGATATGGCTATGGTCTTCCAATCAGTCGCCTGTATGCTCGATATTTTGGTGGTGACCTGCAAATCATCTCTATGGAAGGATACGGCACCGATGCTTACCTGCACTTGTCACGGTTGGGAGATTCGGAGGAGCCCTTGCCTTGA
Protein Sequence
- >LOC_Os07g44330.1
MASEPVARAVAEEVGRWGSMKQTGVSLRYMMEFGSRPTERNLLLSAQFLQKELPIRIARRALELESLPFGLSRKPAILKVILGEWSVNKVRDWYLDSFRDIRYFPEVRNRNDELAFTQMIKMIKVRHNNVVPTMALGVQQLKNEQYRTRKIPTAFDEIHEFLDRFYMSRIGIRMLIGQHVALHDPDPEPGVIGLINTELSPIQVAQAASEDARSICLREYGSAPEIDIYGDPTFTFPYVSSHLHLMLFELVKNSLRAVQERYMNSDKDVPPVRIIVADGAEDVTIKVSDEGGGIPRSGLPRIFTYLYSTAKNPPDMDCPSEGVTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGDSEEPLP* - >LOC_Os07g44330.2
MASEPVARAVAEEVGRWGSMKQTGVSLRYMMEFGSRPTERNLLLSAQFLQKELPIRIARRALELESLPFGLSRKPAILKVILGEWSVNKVRDWYLDSFRDIRYFPEVRNRNDELAFTQMIKMIKVRHNNVVPTMALGVQQLKNEQYRTRKIPTAFDEIHEFLDRFYMSRIGIRMLIGQHVALHDPDPEPGVIGLINTELSPIQVAQAASEDARSICLREYGSAPEIDIYGDPTFTFPYVSSHLHLMLFELVKNSLRAVQERYMNSDKDVPPVRIIVADGAEDVTIKVSDEGGGIPRSGLPRIFTYLYSTAKNPPDMDCPSEGVTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGDSEEPLP* - >LOC_Os07g44330.3
MASEPVARAVAEEVGRWGSMKQTGVSLRYMMEFGSRPTERNLLLSAQFLQKELPIRIARRALELESLPFGLSRKPAILKVILGEWSVNKVRDWYLDSFRDIRYFPEVRNRNDELAFTQMIKMIKVRHNNVVPTMALGVQQLKNEQYRTRKIPTAFDEIHEFLDRFYMSRIGIRMLIGQHVALHDPDPEPGVIGLINTELSPIQVAQAASEDARSICLREYGSAPEIDIYGDPTFTFPYVSSHLHLMLFELVKNSLRAVQERYMNSDKDVPPVRIIVADGAEDVTIKVSDEGGGIPRSGLPRIFTYLYSTAKNPPDMDCPSEGVTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGDSEEPLP*