Information report for CHR721
Gene Details
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Functional Descriptions
- CHR721 functions as a chromatin remodeler and interacts with a known single-stranded binding protein, OsRPA1a, to regulate both male and female reproductive development in rice.
- CHR721 was found to interact with replication protein A (OsRPA1a), which is involved in DNA repair.
- The expressions of genes involved in DNA repair and cell-cycle checkpoints were consistently upregulated in CHR721.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q69WP6
- EMBL: AK069020, AP014963
- AlphaFoldDB: Q69WP6
- EnsemblPlants: Os07t0636200-01
- Gramene: Os07t0636200-01
- KEGG: osa:4344031
- Orthologous matrix: WTNDETK
- InterPro: IPR000330, IPR001650, IPR010003
- PANTHER: PTHR45766, PTHR45766:SF3
- SUPFAM: SSF52540
- PROSITE: PS51192, PS51194, PS51467
- Gene3D: 3.40.50.10810, 3.40.50.300
- OrthoDB: Q69WP6
- SWISS-MODEL: Q69WP6
- Conserved Domain Database: cd18010, cd18793
- eggNOG: KOG1000
Homologs
- Arabidopsis thaliana: AT3G06400, AT3G06010
- Cucumis melo: MELO3C009633
- Cucumis sativus: Csa_6G526520
- Malus domestica: MD13G1138200
- Musa acuminata: Ma07_g16780
- Panicum virgatum: Pavir.2KG535600.1.p
- Rosa chinensis: RchiOBHm_Chr3g0483881
- Saccharum spontaneum: Sspon.01G0039360-1P, Sspon.01G0039360-2C
- Solanum lycopersicum: Solyc02g062780.3
- Triticum aestivum: TaCHR729-A, TaCHR729-B, TaCHR729-D
Sequences
cDNA Sequence
- >LOC_Os07g44210.1
GGCTTTGCACCTGAATCCCATGATCCGTTGGGTACAAGGAAGAAGAGGATACTACTCTCCAAGTAGCGAAAATCCACAAATTCCCTCTCCGGCTCGCGCGCGCGCTCTCAATTTTTTGGGGGAAGAGAAGATCTCCCCTTGGAGGGAACCCCGCCCAAGAATGGCGGGTCTCGGCGGCGGATGGGGCGGCGGGTACGACGACGACGACGACTGGGGGCTGAGCGCGGAGCAGCTCGACCAGCTCGAGCGGGACGCCTACCGCAAGCTCGCCGAGCGCAAGGCCTCCTCCTCCGCCGCCTCCACCGCCACCTCGCCGCTCCCCTCCGCGGCCTACTCGCCGGTCAAGAACAGCCACCACCACCCGGCATCCAGGGTTTCCCAGGAGTCTTGCTTCGGCAAGGTAGAATCACTTTCTCCTTCTCGGCTTAGTCAACCAAATGCATCGGGAAATGCAGTTAATAATAGTCAGGGCAATATGTCTAAGGTATCAGTACATCTTTTCCTTCATTCTACTGGTGTGATCGCAGCGAAGTTCCAGTACCACCAGAAACTTGTGGATGCAGTTCACAAGATCCCCAAAGCCAGCTGGAACGGGAAGGAGAGGGTATGGATGTTCCCACACTCATCATTATCAGTAGCAGAGGAAGTTCTTAGTACAGTACCTGGAATAGCTGTTGAGGTCCAAAAACTGGATCCGCTGGTTAAGCGCGCACTAACTGCTTCTTTATATGCCGGAGATCTTCGAGATTTGTATGGCAAGATTCCAACTGATGTTGAGTCAAAGCTTATGCCGTTTCAGCGTGAAGGTGTCAGGTTTGCTTTACAGCATGGTGCCAGGACCCTGATAGCAGATGAAATGGGTCTTGGCAAGACATTACAGGCAATTGCTGTTGCTTCTTGCCTTCATGATGCCTGGCCAGTTCTTGTAATCTCTCCATCATCCTTGCGATTACATTGGGCTTCTATGATTCAGCATTGGCTTAACATCCCCACGGAAGATATCTTGGTGGTGCTACCACAAACTGGAGGATCAAATAAAGCAGGATACAGATTGGTATATTCAAATACTAAAGGGGATTTTAATCTGGATGGGGTGTTCAATGTGATATCTTATGATGTTGTTCCCAAGATAAAGGACATGCTTCTGGACTTGGATTTTAAGATTGTTATAGCTGATGAATCACACTTTCTGAAGAATGCCCAAGCAAAGAGAACAATGCATTCACTTCCTGTTCTGCAGAAAGCTAAATATGTGGTTTTGCTAAGTGGCACCCCTGCGTTATCTCGCCCTATCGAGCTGTTTACTCAGCTCCAGGCATTGTATCCAACTGTATACAAGAATGTTAATGAGTATGGTAATAGATATTGCAAAGGTGGCTTTTTTGGGCTTTATCAAGGTGCTAGCAATCATGAGGAGCTTCATAATTTGATGAAAGCAACTGTCATGATCCGCAGGTTGAAGAAAGATGTCCTTTCACAGTTGCCTGTTAAACGCAGACAACAGGCCTTTCTGGATTTAAGTGAGAAAGAGATGAGACATATTCGTGCTCTATTTCATGAGTTGGAGACTGTGAAGATCAAAATCCAGTCCTGTGACTCCCAGGAGACGATGGACTCTCTCAAATTTGCTCAAAAGAATCTTATTAACAAGATCTACAATGATTCAGCTGAAGCCAAAATTCCAGCAGTGCTAGATTACCTGGGTACTATAATTGAGGCCGAGTGCAAATTTTTAATATTTGCACATCATCAATCCATGCTTGAAGCTATTCACCAACATCTCTTGAAAAAGAAAGTTAAGTGCATAAGAATTGATGGTCAAACACCTGTACCTGTAAGACAGACTCTAGTCACAGATTTCCAGAATAAGGATGACATCAAGGCAGCAGTGTTATCCATAAAAGCTGGAGGTGTTGGGTTAACTTTGACAGCAGCAAGTACAGTAATCTTTGCTGAGTTATCATGGACTCCAGGTGACCTTATTCAAGCCGAAGACCGTGCCCATCGTATTGGTCAGGTTTCTTCGGTGAACATATATTACCTTCTTGCAAATGACACTGTGGATGACATTATATGGGACGTTGTTCAAGGCAAACTTGAGAATTTGGGACAGATGCTGGATGGGCAGGAGAAAACGCTGGATGTGTCCCAGAGCGACACTAGGCCCAGCCCTTCCAAGCAGAAGACGCTCGACGCCTACCTCAAGCGATGCAGCAATTCCACAGAAGCTGATCAGCCCAAGCTCAAGAACCCTAGGTTCTGACATTTCTCAGGGTTTTTAGCTCTACTATGTTTTTGTTTGGCAATTGGCATGACCCTCTTGCCTTAAACGAAGGAATGCTGCAGTGTCAGGTAGCTGTGTGTTGGTGTTATGATCACAGCCATGCTGTATTTTGTATTACCCAGCTAAATGCCCGTGCGTTGCAATGAAAATTAAGAATAACTTTGATCACAATATCTTTTAAAGCCCCAAGAGAAAGTAAATCATTCATGCAGGCT
CDS Sequence
- >LOC_Os07g44210.1
ATGATCCGTTGGGTACAAGGAAGAAGAGGATACTACTCTCCAAGTAGCGAAAATCCACAAATTCCCTCTCCGGCTCGCGCGCGCGCTCTCAATTTTTTGGGGGAAGAGAAGATCTCCCCTTGGAGGGAACCCCGCCCAAGAATGGCGGGTCTCGGCGGCGGATGGGGCGGCGGGTACGACGACGACGACGACTGGGGGCTGAGCGCGGAGCAGCTCGACCAGCTCGAGCGGGACGCCTACCGCAAGCTCGCCGAGCGCAAGGCCTCCTCCTCCGCCGCCTCCACCGCCACCTCGCCGCTCCCCTCCGCGGCCTACTCGCCGGTCAAGAACAGCCACCACCACCCGGCATCCAGGGTTTCCCAGGAGTCTTGCTTCGGCAAGGTAGAATCACTTTCTCCTTCTCGGCTTAGTCAACCAAATGCATCGGGAAATGCAGTTAATAATAGTCAGGGCAATATGTCTAAGGTATCAGTACATCTTTTCCTTCATTCTACTGGTGTGATCGCAGCGAAGTTCCAGTACCACCAGAAACTTGTGGATGCAGTTCACAAGATCCCCAAAGCCAGCTGGAACGGGAAGGAGAGGGTATGGATGTTCCCACACTCATCATTATCAGTAGCAGAGGAAGTTCTTAGTACAGTACCTGGAATAGCTGTTGAGGTCCAAAAACTGGATCCGCTGGTTAAGCGCGCACTAACTGCTTCTTTATATGCCGGAGATCTTCGAGATTTGTATGGCAAGATTCCAACTGATGTTGAGTCAAAGCTTATGCCGTTTCAGCGTGAAGGTGTCAGGTTTGCTTTACAGCATGGTGCCAGGACCCTGATAGCAGATGAAATGGGTCTTGGCAAGACATTACAGGCAATTGCTGTTGCTTCTTGCCTTCATGATGCCTGGCCAGTTCTTGTAATCTCTCCATCATCCTTGCGATTACATTGGGCTTCTATGATTCAGCATTGGCTTAACATCCCCACGGAAGATATCTTGGTGGTGCTACCACAAACTGGAGGATCAAATAAAGCAGGATACAGATTGGTATATTCAAATACTAAAGGGGATTTTAATCTGGATGGGGTGTTCAATGTGATATCTTATGATGTTGTTCCCAAGATAAAGGACATGCTTCTGGACTTGGATTTTAAGATTGTTATAGCTGATGAATCACACTTTCTGAAGAATGCCCAAGCAAAGAGAACAATGCATTCACTTCCTGTTCTGCAGAAAGCTAAATATGTGGTTTTGCTAAGTGGCACCCCTGCGTTATCTCGCCCTATCGAGCTGTTTACTCAGCTCCAGGCATTGTATCCAACTGTATACAAGAATGTTAATGAGTATGGTAATAGATATTGCAAAGGTGGCTTTTTTGGGCTTTATCAAGGTGCTAGCAATCATGAGGAGCTTCATAATTTGATGAAAGCAACTGTCATGATCCGCAGGTTGAAGAAAGATGTCCTTTCACAGTTGCCTGTTAAACGCAGACAACAGGCCTTTCTGGATTTAAGTGAGAAAGAGATGAGACATATTCGTGCTCTATTTCATGAGTTGGAGACTGTGAAGATCAAAATCCAGTCCTGTGACTCCCAGGAGACGATGGACTCTCTCAAATTTGCTCAAAAGAATCTTATTAACAAGATCTACAATGATTCAGCTGAAGCCAAAATTCCAGCAGTGCTAGATTACCTGGGTACTATAATTGAGGCCGAGTGCAAATTTTTAATATTTGCACATCATCAATCCATGCTTGAAGCTATTCACCAACATCTCTTGAAAAAGAAAGTTAAGTGCATAAGAATTGATGGTCAAACACCTGTACCTGTAAGACAGACTCTAGTCACAGATTTCCAGAATAAGGATGACATCAAGGCAGCAGTGTTATCCATAAAAGCTGGAGGTGTTGGGTTAACTTTGACAGCAGCAAGTACAGTAATCTTTGCTGAGTTATCATGGACTCCAGGTGACCTTATTCAAGCCGAAGACCGTGCCCATCGTATTGGTCAGGTTTCTTCGGTGAACATATATTACCTTCTTGCAAATGACACTGTGGATGACATTATATGGGACGTTGTTCAAGGCAAACTTGAGAATTTGGGACAGATGCTGGATGGGCAGGAGAAAACGCTGGATGTGTCCCAGAGCGACACTAGGCCCAGCCCTTCCAAGCAGAAGACGCTCGACGCCTACCTCAAGCGATGCAGCAATTCCACAGAAGCTGATCAGCCCAAGCTCAAGAACCCTAGGTTCTGA
Protein Sequence
- >LOC_Os07g44210.1
MIRWVQGRRGYYSPSSENPQIPSPARARALNFLGEEKISPWREPRPRMAGLGGGWGGGYDDDDDWGLSAEQLDQLERDAYRKLAERKASSSAASTATSPLPSAAYSPVKNSHHHPASRVSQESCFGKVESLSPSRLSQPNASGNAVNNSQGNMSKVSVHLFLHSTGVIAAKFQYHQKLVDAVHKIPKASWNGKERVWMFPHSSLSVAEEVLSTVPGIAVEVQKLDPLVKRALTASLYAGDLRDLYGKIPTDVESKLMPFQREGVRFALQHGARTLIADEMGLGKTLQAIAVASCLHDAWPVLVISPSSLRLHWASMIQHWLNIPTEDILVVLPQTGGSNKAGYRLVYSNTKGDFNLDGVFNVISYDVVPKIKDMLLDLDFKIVIADESHFLKNAQAKRTMHSLPVLQKAKYVVLLSGTPALSRPIELFTQLQALYPTVYKNVNEYGNRYCKGGFFGLYQGASNHEELHNLMKATVMIRRLKKDVLSQLPVKRRQQAFLDLSEKEMRHIRALFHELETVKIKIQSCDSQETMDSLKFAQKNLINKIYNDSAEAKIPAVLDYLGTIIEAECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDGQTPVPVRQTLVTDFQNKDDIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEKTLDVSQSDTRPSPSKQKTLDAYLKRCSNSTEADQPKLKNPRF*