Gene Details:
- MSU gene ID: LOC_Os07g42290
- RAPdb gene ID: Os07g0614400
- Gene Symbol: qSOR1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- qSOR1 is negatively regulated by auxin, predominantly expressed in root columella cells, and involved in the gravitropic responses of roots.
- Here, we have demonstrated, through the cloning and characterization of qSOR1 (quantitative trait locus for SOIL SURFACE ROOTING 1), that a shallower root growth angle (RGA) could enhance rice yields in saline paddies.
Function-related keywords:
Literature:
- Root angle modifications by the DRO1 homolog improve rice yields in saline paddy fields . DOI: 10.1073/pnas.2005911117 ; PMID: 32817523
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g42290.1
ACTTCCCATTTCTTTTACACCCCAATCTCACCCTCTCCATCTCTCTCTCTCAAGCTCTAAACTCAATGGTAATGGGCACTTAATAGTAGCACTAATACTAGCTACTGTTTTAGCAGCAGCATCCAAGCCCAATCAAATCAAGCTGCCTCACTGAAAGTCTGAAACTGGCCAATCAGAGAGCTCCTGCAAAAACAACCCTGAAACTACTCTGGTTTGCTATCATCCAGCTAGATTCTGTTGCCTCCTAACATCGTCGTTTCGCCGCCGTCACTTTGCTCGAATCATCAGAGCTCTAGGGCTACCTGCTAATTAACCATAGCCATGGGGATTATTAACTGGATGCAGAATCGACTCAGTACTGCTAAACAAGACAAGAGACGAACTGAAGCTGCTGCTGTGGCCTCGTCAGCTCGCAGACGAGGAGGAGGGGGAGGAGAGAGTTGCCGCCAAGAAGAAGCTCGCGACGAGATCAAGATCGCCGGAGATCACCTCCTCTCCATCGGCACGCTCGGGAACGAGTCGCCGCCGCGACCGCCGGCGGCGGCGGCGGCGACGGCGGCAGAGGAGGTGGCGGACTTCACCATCGAGGAGGTGAAGAAGCTGCAGGAGGCGCTGAACAAGCTGCTCCGGCGAGCCAAGTCCACCAAGTCCGGCAGCCGCCGCGGCTCGACGGCGGCGGAGCACGACGCCGACGAGCGCTCCTCCTCCTCCTCCTCCTCCGGCAGCCAGCTGCTGCTGCCGCTCGACAGGTTCCTCAACTGCCCCTCCAGCCTCGAGGTCGACCGGCGCGTGGCGGCGGCCGACGGCGAGTTCTCGCCGGACACGCAGATCATCCTCAGCAAGGCGCGCGACCTCCTCGTCAACACCAATGGCGGCGGCGCCATCAAGCAGAAATCCTTCAGGTTCCTCCTCAAGAAGATGTTCGTCTGCCGCGGCGGCTTCTCGCCGTCGCCGGCGCCGCCGCCCACCTTGAAGGATCCAGTCGAATCAAGAATCGAAAAGTTGTTCAGGACGATGCTTCACAAGAGGATGAACGCTCGACCGAGTAATGCTGCGGCGTCGTCGTCGAGGAAATACTATCTTGAGGATAAGCCGAGGGAGAAGATGCAAAGGGAGCATCTCCATGATGATGAAGATGATGATGAGAATGCAGAAGATATCTTTAAATGGGACAAAACTGATTCAGATTTCATTGTTCTGGAGATGTAGACCGAGACGCACGATTCAATGCGATCATTATTGTTTGCACAATGACTACATGATGGTGGCCTGGTGTCCTGATTTACGCGGAGGAAAATTCGCAGTAATTTTGATGCCACAATAATCCCCATTTGTTCATGAGGTTCAGTTGAATGGCGAATCGATCGCACGGGACAACATACAGAACCGAATGCGATGCGCGACGGTGTAATTCTGAACGAAGATCAAACGTCGACTGGCTGGCTAGTTCAATCATTATTGGATTTGAGCTGAAAATAGGAGAAATTTTCAAGCTCTGTTATCTTTTTCTTTTTTTCAGATTTCAGATACAGTTGGTGTACGTTTCACCATATAGTACTACTCCCCCCAATGTATACTCCATTTCCATTAAATTTGTGGGATACAGCAACAAGTTTTCATTTCATTTC
CDS Sequence
- >LOC_Os07g42290.1
ATGGGGATTATTAACTGGATGCAGAATCGACTCAGTACTGCTAAACAAGACAAGAGACGAACTGAAGCTGCTGCTGTGGCCTCGTCAGCTCGCAGACGAGGAGGAGGGGGAGGAGAGAGTTGCCGCCAAGAAGAAGCTCGCGACGAGATCAAGATCGCCGGAGATCACCTCCTCTCCATCGGCACGCTCGGGAACGAGTCGCCGCCGCGACCGCCGGCGGCGGCGGCGGCGACGGCGGCAGAGGAGGTGGCGGACTTCACCATCGAGGAGGTGAAGAAGCTGCAGGAGGCGCTGAACAAGCTGCTCCGGCGAGCCAAGTCCACCAAGTCCGGCAGCCGCCGCGGCTCGACGGCGGCGGAGCACGACGCCGACGAGCGCTCCTCCTCCTCCTCCTCCTCCGGCAGCCAGCTGCTGCTGCCGCTCGACAGGTTCCTCAACTGCCCCTCCAGCCTCGAGGTCGACCGGCGCGTGGCGGCGGCCGACGGCGAGTTCTCGCCGGACACGCAGATCATCCTCAGCAAGGCGCGCGACCTCCTCGTCAACACCAATGGCGGCGGCGCCATCAAGCAGAAATCCTTCAGGTTCCTCCTCAAGAAGATGTTCGTCTGCCGCGGCGGCTTCTCGCCGTCGCCGGCGCCGCCGCCCACCTTGAAGGATCCAGTCGAATCAAGAATCGAAAAGTTGTTCAGGACGATGCTTCACAAGAGGATGAACGCTCGACCGAGTAATGCTGCGGCGTCGTCGTCGAGGAAATACTATCTTGAGGATAAGCCGAGGGAGAAGATGCAAAGGGAGCATCTCCATGATGATGAAGATGATGATGAGAATGCAGAAGATATCTTTAAATGGGACAAAACTGATTCAGATTTCATTGTTCTGGAGATGTAG
Protein Sequence
- >LOC_Os07g42290.1
MGIINWMQNRLSTAKQDKRRTEAAAVASSARRRGGGGGESCRQEEARDEIKIAGDHLLSIGTLGNESPPRPPAAAAATAAEEVADFTIEEVKKLQEALNKLLRRAKSTKSGSRRGSTAAEHDADERSSSSSSSGSQLLLPLDRFLNCPSSLEVDRRVAAADGEFSPDTQIILSKARDLLVNTNGGGAIKQKSFRFLLKKMFVCRGGFSPSPAPPPTLKDPVESRIEKLFRTMLHKRMNARPSNAAASSSRKYYLEDKPREKMQREHLHDDEDDDENAEDIFKWDKTDSDFIVLEM*