Gene Details:
- MSU gene ID: LOC_Os07g41350
- RAPdb gene ID: Os07g0604700
- Gene Symbol: OsB12D1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Among the six OsB12Ds, OsB12D1 is one of the major transcripts and is primarily expressed in germinating seed and root.
- Bioinformatics analyses indicated that OsB12D1 is an anoxic or submergence resistance-related gene.
- The mitochondrion-located protein OsB12D1 enhances flooding tolerance during seed germination and early seedling growth in rice.
- RT-PCR results showed OsB12D1 is induced remarkably in the coleoptiles or roots by flooding during seed germination and early seedling growth.
- This work indicated that OsB12D1 is a promising gene that can help to enhance rice seedling establishment in farming practices, especially for direct seeding.
- OsB12D1 was identified in the mitochondrion by subcellular localization analysis and possibly enhances electron transport through mediating Fe and oxygen availability under flooded conditions.
Function-related keywords:
- root , submergence , growth , seedling , seed , seed-germination , tolerance , Fe , seedling-growth
Literature:
- The mitochondrion-located protein OsB12D1 enhances flooding tolerance during seed germination and early seedling growth in rice . DOI: 10.3390/ijms150813461 ; PMID: 25089878
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g41350.1
GCATTGTGCATCGAGTTCCAGCCCAGATTTCTTCAGTTTCAAGGCTTCGATCTATCGGATCATTCGTTGCAGTCCTAGCAAGAAACAAAAACAGCAGCAGCGTCAGGCAGACGAGGATCATCCATCGATCGACATGGGCCGTTGGGTGAAGCCAGATGTATACCCGCTGATCGTGGCGATGTCTCTGGTGGGAGGGATGTGCGTGTTCCAGCTGACGAGGAACGTGTTCATGAACCCGGACGTGAGGGTGAACAAGAGCCACCGCCAGAGCGCCGTGCTGGAGAACGCCGACGAGGGGGAGAAGTATCACCACCACGCCTTCCGCCGATTCCTCGGCACGCAGCGCCCCGAGGTCTTCCCGGCGATCAACCGCTTCTTCGCCGGCCCGGCCACCGTCCCCAAGAGTGACCGTCAAAACTGATCCTCCAAATGCTTATTAGCCGCTATATAGTAATGTACTCCTATATTAATTATAGCCAAATGAGAGGCTGATTATAGTGCTATACACGGGTACTTTAATTACTGAGTTTTGTTACTGGATATGTGTCGCATACGTGCGAACTTAATCGTATCTGAATAAAATGAGATAAAAATGAAGAAATGGCACCTACTCCACTACTCCAATTTTGTATTTTGCGTTTTGCAAATTATCGTGGTGCTTTGGTGAAAATGGCATATCTCTTTCTTTCGTGGATGAGCAATCGGTTC
CDS Sequence
- >LOC_Os07g41350.1
ATGGGCCGTTGGGTGAAGCCAGATGTATACCCGCTGATCGTGGCGATGTCTCTGGTGGGAGGGATGTGCGTGTTCCAGCTGACGAGGAACGTGTTCATGAACCCGGACGTGAGGGTGAACAAGAGCCACCGCCAGAGCGCCGTGCTGGAGAACGCCGACGAGGGGGAGAAGTATCACCACCACGCCTTCCGCCGATTCCTCGGCACGCAGCGCCCCGAGGTCTTCCCGGCGATCAACCGCTTCTTCGCCGGCCCGGCCACCGTCCCCAAGAGTGACCGTCAAAACTGA
Protein Sequence
- >LOC_Os07g41350.1
MGRWVKPDVYPLIVAMSLVGGMCVFQLTRNVFMNPDVRVNKSHRQSAVLENADEGEKYHHHAFRRFLGTQRPEVFPAINRFFAGPATVPKSDRQN*