Gene Details:

Functional Descriptions:

  • Overexpression of GE promoted cell proliferation and enhanced rice plant growth and grain yield, but reduced embryo size, sugGEsting that GE is critical for coordinating rice embryo and endosperm development.
  • The function of GE in each tissue is distinct, controlling cell size in the embryo and cell death in the endosperm.
  • Post-embryonic growth of GE seedling was severely inhibited due to defective shoot apical meristem (SAM) maintenance.
  • GE, which encodes CYP78A13, is predominantly expressed in the interfacing tissues of the both embryo and endosperm.
  • In contrast to the loss-of-function mutant with larGE embryo and small endosperm, GE overexpression causes a small embryo and enlarGEd endosperm.
  • A complementation analysis coupled with heterofertilization showed that complementation of GE mutation in either embryo or endosperm failed to restore the wild-type embryo/endosperm ratio.
  • Among GEnes associated with embryo/endosperm size, REDUCED EMBRYO GEnes, whose loss-of-function causes a phenotype opposite to GE, are revealed to regulate endosperm size upstream of GE.
  • To fully understand the embryo-endosperm size control, the GEnetic network of the related GEnes should be elucidated.
  • However, the molecular mechanism(s) underlying embryo and endosperm development remains larGEly unknown, particularly in rice, the model cereal.
  • GE is expressed predominantly in the scutellar epithelium, the interface region between embryo and endosperm.
  • Mutation of GE resulted in a larGE embryo in the seed, which was caused by excessive expansion of scutellum cells.
  • Moreover, transGEnic Arabidopsis plants overexpressing AtCYP78A10, a GE homolog, also produced bigGEr seeds, implying a conserved role for the CYP78A subfamily of P450s in regulating seed development.
  • 2 showed that both can promote grain growth.
  • Variations in CYP78A13 coding region influence grain size and yield in rice.
  • Grain size is one of the most important determinants of crop yield in cereals.
  • Here, we identified a dominant mutant, big grain2 (bg2-D) from our enhancer-trapping population.
  • Sequence search revealed that CYP78A13 has a paralogue Grain<U+2005>Length 3.
  • Detailed examination of the transgenic plants with chimaeric constructs suggested that variation in CYP78A13 coding region is responsible for the variation of grain yield.
  • Taken together, our results suggest that the variations in CYP78A13 in the indica varieties hold potential in rice breeding for application of grain yield improvement.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os07g41240.1
    ACGTCTTCTTCCTCCCAAGAAAACTCCTCTCACTTCGCGAACGCTTCCCATGGCGCTCTCCTCCATGGCCGCGGCGCAAGAGAGCTCCCTCCTCCTCTTCCTCCTCCCGACGTCGGCCGCCTCCGTGTTCCCGCCGCTCATCTCCGTGGTCGTCCTCGCCGCGCTCCTCCTGTGGCTCTCGCCGGGTGGCCCCGCGTGGGCGCTGTCCCGTTGCCGTGGCACGCCGCCGCCGCCGGGCGTGGCGGGGGGCGCGGCCAGCGCGCTGTCCGGCCCTGCCGCGCACCGCGTGCTCGCCGGGATTTCGCGCGCCGTCGAGGGCGGCGCGGCGGTGATGTCGCTCTCCGTCGGCCTCACCCGCCTCGTCGTGGCGAGCCGGCCGGAGACGGCGAGGGAGATCCTCGTCAGCCCGGCGTTCGGCGACCGCCCCGTGAAGGACGCGGCGAGGCAGCTGCTGTTCCACCGCGCCATGGGGTTCGCCCCGTCGGGCGACGCGCACTGGCGCGGGCTCCGCCGCGCCTCCGCGGCGCACCTCTTCGGCCCGCGCCGCGTGGCCGGGTCCGCGCCCGAGCGCGAGGCCATCGGCGCCCGCATAGTCGGCGACGTCGCCTCCCTCATGTCCCGCCGCGGCGAGGTCCCCCTCCGCCGCGTCCTTCACGCCGCGTCGCTCGGCCACGTCATGGCGACCGTCTTCGGCAAGCGGCACGGCGACATCTCGATCCAGGACGGCGAGCTCCTGGAGGAGATGGTCACCGAAGGGTACGACCTCCTCGGCAAGTTCAACTGGGCCGACCACCTGCCATTGCTCAGGTGGCTCGACCTCCAGGGCATCCGCCGCCGGTGCAACAGGCTAGTCCAGAAGGTGGAGGTGTTCGTCGGAAAGATCATACAGGAGCACAAGGCGAAGCGAGCTGCCGGAGGCGTCGCCGTCGCCGACGGCGTCTTGGGCGACTTCGTCGACGTCCTCCTCGACCTCCAGGGAGAGGAGAAGATGTCAGACTCCGACATGATCGCTGTTCTTTGGGAGATGATCTTTAGAGGGACGGACACGGTGGCGATCTTGATGGAGTGGGTGATGGCGAGGATGGTGATGCACCCGGAGATCCAGGCGAAGGCGCAGGCGGAGGTGGACGCCGCCGTGGGGGGACGCCGCGGCCGCGTCGCCGACGGCGACGTGGCGAGCCTCCCCTACATCCAGTCCATCGTGAAGGAGACGCTGCGCATGCACCCGCCGGGCCCGCTCCTGTCGTGGGCGCGCCTCGCCGTGCACGACGCGCGCGTCGGTGGCCACGCCGTCCCCGCCGGGACGACGGCGATGGTGAACATGTGGGCGATCGCCCACGACGCCGCCGTCTGGCCGGAGCCGGATGCGTTCCGCCCGGAGCGCTTCTCGGAGGGGGAGGACGTCGGCGTGCTCGGCGGCGACCTCCGCCTCGCGCCGTTCGGCGCCGGCCGCCGCGTCTGCCCTGGCAGGATGCTGGCGCTCGCCACCGCCCACCTCTGGCTCGCCCAGCTGCTGCACGCCTTCGACTGGTCCCCCACCGCCGCCGGCGTCGACCTGTCCGAGCGCCTCGGCATGTCGCTGGAGATGGCGGCGCCGCTCGTGTGCAAGGCCGTGGCTAGGGCCTGAGCCCTAGCCGCCGCCGCCGCCATTATTGCCATTGATGTGGCTAGCGACGTTGTCGTGCTCGCATCCATACTCCTCCATAGGCAACTCGTCTAGCCAATGAAGAAAGCTACTATCTATCTATCTATCAAGCTAGCTGCTACTATCACAAACCGCATTTCGGCATCATCTTAAATTAGCTCTTAGGGGTGTAGGCGATTTTGGTTTCCCCCAAAAATTTGCTTTGCCAGTCTTTTGGTTTAAATCGAGGCATTAGTTGTGAAACATCATGAGAAGTTATTTAAATCTGAGGAATTTTGTTTGAACCTTTTCTGGTGTGCT
CDS Sequence
  • >LOC_Os07g41240.1
    ATGGCGCTCTCCTCCATGGCCGCGGCGCAAGAGAGCTCCCTCCTCCTCTTCCTCCTCCCGACGTCGGCCGCCTCCGTGTTCCCGCCGCTCATCTCCGTGGTCGTCCTCGCCGCGCTCCTCCTGTGGCTCTCGCCGGGTGGCCCCGCGTGGGCGCTGTCCCGTTGCCGTGGCACGCCGCCGCCGCCGGGCGTGGCGGGGGGCGCGGCCAGCGCGCTGTCCGGCCCTGCCGCGCACCGCGTGCTCGCCGGGATTTCGCGCGCCGTCGAGGGCGGCGCGGCGGTGATGTCGCTCTCCGTCGGCCTCACCCGCCTCGTCGTGGCGAGCCGGCCGGAGACGGCGAGGGAGATCCTCGTCAGCCCGGCGTTCGGCGACCGCCCCGTGAAGGACGCGGCGAGGCAGCTGCTGTTCCACCGCGCCATGGGGTTCGCCCCGTCGGGCGACGCGCACTGGCGCGGGCTCCGCCGCGCCTCCGCGGCGCACCTCTTCGGCCCGCGCCGCGTGGCCGGGTCCGCGCCCGAGCGCGAGGCCATCGGCGCCCGCATAGTCGGCGACGTCGCCTCCCTCATGTCCCGCCGCGGCGAGGTCCCCCTCCGCCGCGTCCTTCACGCCGCGTCGCTCGGCCACGTCATGGCGACCGTCTTCGGCAAGCGGCACGGCGACATCTCGATCCAGGACGGCGAGCTCCTGGAGGAGATGGTCACCGAAGGGTACGACCTCCTCGGCAAGTTCAACTGGGCCGACCACCTGCCATTGCTCAGGTGGCTCGACCTCCAGGGCATCCGCCGCCGGTGCAACAGGCTAGTCCAGAAGGTGGAGGTGTTCGTCGGAAAGATCATACAGGAGCACAAGGCGAAGCGAGCTGCCGGAGGCGTCGCCGTCGCCGACGGCGTCTTGGGCGACTTCGTCGACGTCCTCCTCGACCTCCAGGGAGAGGAGAAGATGTCAGACTCCGACATGATCGCTGTTCTTTGGGAGATGATCTTTAGAGGGACGGACACGGTGGCGATCTTGATGGAGTGGGTGATGGCGAGGATGGTGATGCACCCGGAGATCCAGGCGAAGGCGCAGGCGGAGGTGGACGCCGCCGTGGGGGGACGCCGCGGCCGCGTCGCCGACGGCGACGTGGCGAGCCTCCCCTACATCCAGTCCATCGTGAAGGAGACGCTGCGCATGCACCCGCCGGGCCCGCTCCTGTCGTGGGCGCGCCTCGCCGTGCACGACGCGCGCGTCGGTGGCCACGCCGTCCCCGCCGGGACGACGGCGATGGTGAACATGTGGGCGATCGCCCACGACGCCGCCGTCTGGCCGGAGCCGGATGCGTTCCGCCCGGAGCGCTTCTCGGAGGGGGAGGACGTCGGCGTGCTCGGCGGCGACCTCCGCCTCGCGCCGTTCGGCGCCGGCCGCCGCGTCTGCCCTGGCAGGATGCTGGCGCTCGCCACCGCCCACCTCTGGCTCGCCCAGCTGCTGCACGCCTTCGACTGGTCCCCCACCGCCGCCGGCGTCGACCTGTCCGAGCGCCTCGGCATGTCGCTGGAGATGGCGGCGCCGCTCGTGTGCAAGGCCGTGGCTAGGGCCTGA
Protein Sequence
  • >LOC_Os07g41240.1
    MALSSMAAAQESSLLLFLLPTSAASVFPPLISVVVLAALLLWLSPGGPAWALSRCRGTPPPPGVAGGAASALSGPAAHRVLAGISRAVEGGAAVMSLSVGLTRLVVASRPETAREILVSPAFGDRPVKDAARQLLFHRAMGFAPSGDAHWRGLRRASAAHLFGPRRVAGSAPEREAIGARIVGDVASLMSRRGEVPLRRVLHAASLGHVMATVFGKRHGDISIQDGELLEEMVTEGYDLLGKFNWADHLPLLRWLDLQGIRRRCNRLVQKVEVFVGKIIQEHKAKRAAGGVAVADGVLGDFVDVLLDLQGEEKMSDSDMIAVLWEMIFRGTDTVAILMEWVMARMVMHPEIQAKAQAEVDAAVGGRRGRVADGDVASLPYIQSIVKETLRMHPPGPLLSWARLAVHDARVGGHAVPAGTTAMVNMWAIAHDAAVWPEPDAFRPERFSEGEDVGVLGGDLRLAPFGAGRRVCPGRMLALATAHLWLAQLLHAFDWSPTAAGVDLSERLGMSLEMAAPLVCKAVARA*