Gene Details:
- MSU gene ID: LOC_Os07g39470
- RAPdb gene ID: Os07g0583600
- Gene Symbol: CIGR2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Localization experiments using GFP-fusions of both CIGR1 and CIGR2 in a transient onion assay confirmed the nuclear localization of both rice proteins (Fig. 2), supporting the possible role of each as transcriptional regulators in the defense reactions.
- The fact that the induction of CIGR1 and CIGR2 is not inhibited by pretreatment with cycloheximide strongly indicates that these two gene products act in the early step of the elicitor-response.
Function-related keywords:
Literature:
- Identification and characterization of two new members of the GRAS gene family in rice responsive to N-acetylchitooligosaccharide elicitor . DOI: 10.1016/s0167-4781(02)00626-7 ; PMID: 12591613
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g39470.1
GCACGGGCCACCGGGTAGAAATACCCGCGCCCACCCGAAAAATTCCCCAGCTCACCTCCTCCTCACTACCACCACCACCACCACCACCTGCTTCCTCCGCGGCTGCGTGCGCCGCCTCCCCAACCCTTCGTCCTCCCCGCCGGCCGCCGCTGAGATCCGACGCGCCGGAGCGGAGCTCGCTGAGATTTTGTTCCTGCTGGATTTCTGAAATTTTACTGGAGGACTAGAGATATCAAGACACCAACAACAAACTAGTACAAAGTTTTCCTTCCAGTTAATCTGTTCCTGGATCTCCTTGCCATACGCGAAGCAGTGGATACTATGCAGTAATTGGTTAGGAGGTCTTTACTGAACCATAATGGCTGATACTCCAACTTCCCGAATGATTCATCCCTTCAGCAATATACCGAGCCAAAACCTGAAGCAGTTCCAGTATTCTGATAATCCACAGCACCCTTGCCACCCTTATAGGGCACCTTCAGACACCCACGTTGTGCCACATCATTATGGCCTAAAGTCACATTCACCGGATGCTGGTTATGAAAGCCAGGCTACTCCTAACAAGTACACATTGGACTCCTCTGAAGGTGCTGGTTGTATGAGACATGATTCTCCTTCCAGTCAAAGTTTCACAACCAGAAGTGGTAGCCCTCTATCTCAGGAAGACAGCCACTCTGACTCGACTGATGGATCTCCTGTAGGCGCCTCCTGTGTCACTGAGGATCCTAATGATCTGAAGCAAAAACTGAAGGATCTCGAGGCCGTTATGCTTGGGCCAGACTCGGAAATAGTCAACAGCCTTGAGAATTCGGTGGCAAACCAACTTTCCTTGGAGCCGGAGAAGTGGGTGCGCATGATGGGCATTCCTAGAGGCAACTTGAAAGAGCTACTGATTGCCTGTGCTAGAGCTGTGGAAGAGAAGAATAGCTTTGCTATTGATATGATGATTCCAGAGCTGAGAAAAATAGTTTCGGTATCTGGTGAGCCACTTGAGAGGTTGGGAGCCTACATGGTAGAAGGGCTTGTTGCCAGGCTTGCCTCCTCTGGCATTTCAATCTACAAAGCTTTGAAATGCAAGGAACCAAAGAGCTCTGACCTTCTGTCTTACATGCACTTCCTGTATGAGGCCTGTCCCTACTTCAAGTTTGGGTATATGTCGGCAAATGGTGCTATTGCAGAGGCTGTCAAGGGAGAAGACAGGATTCATATCATCGACTTCCATATCTCTCAAGGGGCTCAGTGGATCTCTCTCCTTCAGGCCCTTGCAGCCAGGCCTGGTGGACCACCAACTGTAAGGATCACTGGTATTGATGACTCAGTGTCAGCTTACGCACGAGGCGGCGGGCTAGAGCTGGTCGGAAGGAGGCTGTCGCACATCGCCAGCCTGTGCAAGGTGCCCTTTGAATTCCACCCACTTGCTATCTCCGGCAGCAAGGTGGAGGCAGCACATCTCGGAGTCATCCCCGGGGAAGCCCTCGCCGTGAACTTCACCCTGGAGCTGCACCACATTCCAGACGAGTCGGTGAGCACGGCGAACCACCGTGACCGCCTCCTAAGGATGGTGAAGAGCCTGTCGCCGAAGGTACTCACCCTGGTGGAGATGGAGTCCAACACGAACACGGCGCCATTCCCGCAGAGGTTCGCGGAGACGCTGGACTACTACACCGCCATCTTCGAGTCCATCGACCTGACGCTGCCGAGGGACGACAGGGAGAGGATCAACATGGAGCAGCACTGCCTCGCGAGGGAGATCGTCAACCTCATCGCGTGCGAGGGGGAGGAGAGGGCGGAGCGGTACGAGCCCTTCGGCAAGTGGAAGGCGCGCCTCACCATGGCCGGGTTCAGGCCGTCGCCGCTCAGCTCGCTGGTGAACGCCACCATCAGGACGCTGCTGCAGAGCTACTCGGACAACTACAAGCTCGCCGAGAGGGATGGGGCGCTCTACCTCGGGTGGAAGAGCAGGCCCCTGGTGGTCTCGTCGGCGTGGCACTAGCGTTGTGACTTTGTGAGGTGATCTGACGACGAACTTCCCTTGTAACCATCTTGGCTGGGGGCTTTAGAAAGCTATAGTGATCATGGACTGGTAAGGGTAGCTGTAACAATGGTGTTGTAATGGTAAGGTAGCGGCTAGGGTCAAACTCGAAAATGGGCAAAATGCTGATGAGGTGTAGAAGTGTAGTACATGTTTGAGAGTATATGTTTCAGTTTTTCTTTTAAATGTCTTGTAGTAATGTTGTGGCACACTAATGTCTATGATCAGAATTATCATCCACTATAAGCTAAAATATCCATTGGAATGCTGGCAA
CDS Sequence
- >LOC_Os07g39470.1
ATGGCTGATACTCCAACTTCCCGAATGATTCATCCCTTCAGCAATATACCGAGCCAAAACCTGAAGCAGTTCCAGTATTCTGATAATCCACAGCACCCTTGCCACCCTTATAGGGCACCTTCAGACACCCACGTTGTGCCACATCATTATGGCCTAAAGTCACATTCACCGGATGCTGGTTATGAAAGCCAGGCTACTCCTAACAAGTACACATTGGACTCCTCTGAAGGTGCTGGTTGTATGAGACATGATTCTCCTTCCAGTCAAAGTTTCACAACCAGAAGTGGTAGCCCTCTATCTCAGGAAGACAGCCACTCTGACTCGACTGATGGATCTCCTGTAGGCGCCTCCTGTGTCACTGAGGATCCTAATGATCTGAAGCAAAAACTGAAGGATCTCGAGGCCGTTATGCTTGGGCCAGACTCGGAAATAGTCAACAGCCTTGAGAATTCGGTGGCAAACCAACTTTCCTTGGAGCCGGAGAAGTGGGTGCGCATGATGGGCATTCCTAGAGGCAACTTGAAAGAGCTACTGATTGCCTGTGCTAGAGCTGTGGAAGAGAAGAATAGCTTTGCTATTGATATGATGATTCCAGAGCTGAGAAAAATAGTTTCGGTATCTGGTGAGCCACTTGAGAGGTTGGGAGCCTACATGGTAGAAGGGCTTGTTGCCAGGCTTGCCTCCTCTGGCATTTCAATCTACAAAGCTTTGAAATGCAAGGAACCAAAGAGCTCTGACCTTCTGTCTTACATGCACTTCCTGTATGAGGCCTGTCCCTACTTCAAGTTTGGGTATATGTCGGCAAATGGTGCTATTGCAGAGGCTGTCAAGGGAGAAGACAGGATTCATATCATCGACTTCCATATCTCTCAAGGGGCTCAGTGGATCTCTCTCCTTCAGGCCCTTGCAGCCAGGCCTGGTGGACCACCAACTGTAAGGATCACTGGTATTGATGACTCAGTGTCAGCTTACGCACGAGGCGGCGGGCTAGAGCTGGTCGGAAGGAGGCTGTCGCACATCGCCAGCCTGTGCAAGGTGCCCTTTGAATTCCACCCACTTGCTATCTCCGGCAGCAAGGTGGAGGCAGCACATCTCGGAGTCATCCCCGGGGAAGCCCTCGCCGTGAACTTCACCCTGGAGCTGCACCACATTCCAGACGAGTCGGTGAGCACGGCGAACCACCGTGACCGCCTCCTAAGGATGGTGAAGAGCCTGTCGCCGAAGGTACTCACCCTGGTGGAGATGGAGTCCAACACGAACACGGCGCCATTCCCGCAGAGGTTCGCGGAGACGCTGGACTACTACACCGCCATCTTCGAGTCCATCGACCTGACGCTGCCGAGGGACGACAGGGAGAGGATCAACATGGAGCAGCACTGCCTCGCGAGGGAGATCGTCAACCTCATCGCGTGCGAGGGGGAGGAGAGGGCGGAGCGGTACGAGCCCTTCGGCAAGTGGAAGGCGCGCCTCACCATGGCCGGGTTCAGGCCGTCGCCGCTCAGCTCGCTGGTGAACGCCACCATCAGGACGCTGCTGCAGAGCTACTCGGACAACTACAAGCTCGCCGAGAGGGATGGGGCGCTCTACCTCGGGTGGAAGAGCAGGCCCCTGGTGGTCTCGTCGGCGTGGCACTAG
Protein Sequence
- >LOC_Os07g39470.1
MADTPTSRMIHPFSNIPSQNLKQFQYSDNPQHPCHPYRAPSDTHVVPHHYGLKSHSPDAGYESQATPNKYTLDSSEGAGCMRHDSPSSQSFTTRSGSPLSQEDSHSDSTDGSPVGASCVTEDPNDLKQKLKDLEAVMLGPDSEIVNSLENSVANQLSLEPEKWVRMMGIPRGNLKELLIACARAVEEKNSFAIDMMIPELRKIVSVSGEPLERLGAYMVEGLVARLASSGISIYKALKCKEPKSSDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPPTVRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLGVIPGEALAVNFTLELHHIPDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYSDNYKLAERDGALYLGWKSRPLVVSSAWH*