Gene Details:
- MSU gene ID: LOC_Os07g36170
- RAPdb gene ID: Os07g0545800
- Gene Symbol: CIGR1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Localization experiments using GFP-fusions of both CIGR1 and CIGR2 in a transient onion assay confirmed the nuclear localization of both rice proteins (Fig. 2), supporting the possible role of each as transcriptional regulators in the defense reactions.
- The fact that the induction of CIGR1 and CIGR2 is not inhibited by pretreatment with cycloheximide strongly indicates that these two gene products act in the early step of the elicitor-response.
Function-related keywords:
Literature:
- Identification and characterization of two new members of the GRAS gene family in rice responsive to N-acetylchitooligosaccharide elicitor . DOI: 10.1016/s0167-4781(02)00626-7 ; PMID: 12591613
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g36170.1
GCACCTCCGGCTCGGGTATAATTATCGCAGCACACGAAAAGAGAACCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGTGGAAGTGGATCGGGGCATCGCTGCGGCGTCGGGGCTGTGCAGATCGGAGGAGGTCATGAACGACTAATCTCCGTTCATTTATTATGGACTTGCACCAGTTATTAAAGTACAGATTGACTGGCGCTAACGTTGTGTACGAAATTCCTACAGAGAACAACTTGCAAAACTCTCCCTGGCAAGCTAACCCACTGAAGTACGAGTTCAGCGATTCCCCATACACCCCTCTCTCTTCCCAATTTGAGTGTGACAATTTGTCTGCTCTTACCAACACTCCAGATAACCAGAGCTCTACAGAAACCATTTCAGCCCAACCAATCTCCCCATTGGAAGCAGACAGCTCATATAGACAGGCGGGTATTCTTCTCCAGGAGAACATTCAAGTGGGAGCTGATCCGTTGTATGCTACATCAAGACATAATATGCAACACGCCTTACGGGAGATTGAGACTGTTCTGATGGCACCTGATACAGATGATGCAACAACTAGCACCAAGCATGAGTTTGAGGAAATCAAGCCTGCTCAGCTTGTGAGGCAGCGGTCGAGAACATGGAGTCATGAATCACGGCAGCCGTTACCTGGAGTTGGTCGGTCACAGTTTGCATCTGGTGGATACCCCACAGCAAGCTATGAATTTCGTCCAGAGAAACGGCAAAGGGAGTTAAGGGAAGACCCTCAGATAATTGTGAAGCAGCTATTAACCAGGTGTGCTGAGGCTCTGAGTGAGGACAGGACAGAGGAGTTCCATAAGCTTGTTCAGGAGGCTCGTGGAGTGGTCTCAATCAACGGGGAACCAATCCAACGTCTAGGTGCTTACCTACTGGAGGGTTTGGTTGCTAGACATGGAAACTCTGGCACAAACATCTACCGTGCTCTGAAGTGCCGTGAGCCAGAGAGCAAGGAGCTCCTGTCCTACATGAGAATTCTATACAATATCTGCCCTTACTTCAAGTTTGGCTATATGGCAGCCAATGGGGCGATTGCAGAAGCATTGAGAACTGAGAACAATATCCACATAATTGATTTTCAGATTGCTCAAGGGACTCAATGGATCACACTGATACAAGCATTAGCTGCAAGGCCTGGTGGTCCTCCTCGTGTGCGGATCACCGGGATAGATGACCCAGTGTCAGAGTATGCTCGTGGTGAAGGTCTTGACATTGTGGGGAAAATGTTGAAAAGCATGTCTGAAGAATTCAAAATACCTCTGGAGTTTACGCCTCTGTCTGTCTATGCCACACAAGTCACGAAAGAGATGCTTGAGATCAGGCCAGGTGAAGCACTGTCTGTAAACTTCACACTCCAGCTACACCACACCCCGGACGAGAGCGTGGATGTCAACAACCCACGCGATGGTCTGCTCCGGATGGTGAAAGGGCTGTCCCCGAAGGTGACTACTTTGGTAGAGCAGGAGTCACACACCAACACAACGCCTTTCTTGATGAGGTTTGGGGAGACCATGGAGTACTACTCCGCCATGTTCGAGTCGATCGACGCCAACCTGCCGCGGGACAACAAGGAGAGGATCAGCGTGGAGCAGCACTGCCTCGCCAAGGACATCGTCAACATCATCGCCTGCGAGGGGAAGGACAGGGTGGAGAGGCATGAGCTGCTTGGCAAGTGGAAGTCGAGGCTGACCATGGCCGGCTTCAGGCCTTACCCGTTGAGCTCGTACGTCAACTCGGTGATAAGGAAGCTTCTCGCCTGCTACTCCGATAAATACACATTGGATGAGAAGGACGGCGCGATGCTTCTCGGCTGGAGGAGCAGAAAGCTGATATCTGCTTCTGCGTGGCACTGACAGTAGTATGTTGAGAAGAAGAAATGATAGAGAGCATATATATACATACCGATTCCCTGGTCCAATTTACAGAATGATACCCTTTGATGTACCCTCAGTTTGATTGACAGCGGGTGTTGCCTTCATTTATAGACCAGGATCAAACATTGACATTAGATTTGTAGAGAAGTTGTATGATAATAATTTTCTTTGCGATTCAATGTATGATGTATCCATGGCTGCCATAGTTAATAATATTCTTGCATAGTCATATTGATCGGCTAATCACCCGTGGATTAGCGTTGTGTCTGTCTTGACAATAAATTTCTACTTGTTGGCTTGTTGCTGTCCAATGCACAATGAATCATCATTCATCGATTTGTGCTGCAACCAACTTTGTGCACATAATATCAGCATGTATTATCACCAAGAGCGTTCTCTTTTGTTACTGTCTGGAAGGACAATGGCAGACAGACATGTTGCTATCGTCGTTCATCAGCAAAGACATTGTGAATAGGGGACAAAGACCAATTAATCAGCGTTGTGGCTACTTGTCCAAGAATGCCGACATAAGAAGGGGACCTTGTGTTTAAGAGAGATTGTTGCATTGCTGCCGACCTGAACCTGCCAAATGGAACGCTCAGCGACAATTTTGCCTCCTTATGACCCCTGAAATGTTGAAAAAATTATGGCTATGTCGCTCCAAAGTCGTCGTGACTTTAGACATACTCTACGTGCCACTGTTTTTAGCAGCACCAGCACGGCATGAGTAGAACCAAAAATATGCAAGCCAACGAATTGACTTCCTCCAGCCTTCAAGTCCCGTGCCACAACCCTCCAAAGTCCAGAGTGTTGAGCTAACGAGATTTATGACCGGTTTGATCCTACCCTTGGAGGAAAGGGAGCACAGTGTTGTCACTTGTGAGATTTCATGTAATGACAATGCAGGAGCAATTCTTAAACGAAGCAA - >LOC_Os07g36170.2
GCACCTCCGGCTCGGGTATAATTATCGCAGCACACGAAAAGAGAACCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGTGGAAGTGGATCGGGGCATCGCTGCGGCGTCGGGGCTGTGCAGATCGGAGGAGGTCATGAACGACTAATCTCCGTTCATTTATTATGGACTTGCACCAGTTATTAAAGTACAGATTGACTGGCGCTAACGTTGTGTACGAAATTCCTACAGAGAACAACTTGCAAAACTCTCCCTGGCAAGCTAACCCACTGAAGTACGAGTTCAGCGATTCCCCATACACCCCTCTCTCTTCCCAATTTGAGTGTGACAATTTGTCTGCTCTTACCAACACTCCAGATAACCAGAGCTCTACAGAAACCATTTCAGCCCAACCAATCTCCCCATTGGAAGCAGACAGCTCATATAGACAGGCGGGTATTCTTCTCCAGGAGAACATTCAAGTGGGAGCTGATCCGTTGTATGCTACATCAAGACATAATATGCAACACGCCTTACGGGAGATTGAGACTGTTCTGATGGCACCTGATACAGATGATGCAACAACTAGCACCAAGCATGAGTTTGAGGAAATCAAGCCTGCTCAGCTTGTGAGGCAGCGGTCGAGAACATGGAGTCATGAATCACGGCAGCCGTTACCTGGAGTTGGTCGGTCACAGTTTGCATCTGGTGGATACCCCACAGCAAGCTATGAATTTCGTCCAGAGAAACGGCAAAGGGAGTTAAGGGAAGACCCTCAGATAATTGTGAAGCAGCTATTAACCAGGTGTGCTGAGGCTCTGAGTGAGGACAGGACAGAGGAGTTCCATAAGCTTGTTCAGGAGGCTCGTGGAGTGGTCTCAATCAACGGGGAACCAATCCAACGTCTAGGTGCTTACCTACTGGAGGGTTTGGTTGCTAGACATGGAAACTCTGGCACAAACATCTACCGTGCTCTGAAGTGCCGTGAGCCAGAGAGCAAGGAGCTCCTGTCCTACATGAGAATTCTATACAATATCTGCCCTTACTTCAAGTTTGGCTATATGGCAGCCAATGGGGCGATTGCAGAAGCATTGAGAACTGAGAACAATATCCACATAATTGATTTTCAGATTGCTCAAGGGACTCAATGGATCACACTGATACAAGCATTAGCTGCAAGGCCTGGTGGTCCTCCTCGTGTGCGGATCACCGGGATAGATGACCCAGTGTCAGAGTATGCTCGTGGTGAAGGTCTTGACATTGTGGGGAAAATGTTGAAAAGCATGTCTGAAGAATTCAAAATACCTCTGGAGTTTACGCCTCTGTCTGTCTATGCCACACAAGTCACGAAAGAGATGCTTGAGATCAGGCCAGGTGAAGCACTGTCTGTAAACTTCACACTCCAGCTACACCACACCCCGGACGAGAGCGTGGATGTCAACAACCCACGCGATGGTCTGCTCCGGATGGTGAAAGGGCTGTCCCCGAAGGTGACTACTTTGGTAGAGCAGGAGTCACACACCAACACAACGCCTTTCTTGATGAGGTTTGGGGAGACCATGGAGTACTACTCCGCCATGTTCGAGTCGATCGACGCCAACCTGCCGCGGGACAACAAGGAGAGGATCAGCGTGGAGCAGCACTGCCTCGCCAAGGACATCGTCAACATCATCGCCTGCGAGGGGAAGGACAGGGTGGAGAGGCATGAGCTGCTTGGCAAGTGGAAGTCGAGGCTGACCATGGCCGGCTTCAGGCCTTACCCGTTGAGCTCGTACGTCAACTCGGTGATAAGGAAGCTTCTCGCCTGCTACTCCGATAAATACACATTGGATGAGAAGGACGGCGCGATGCTTCTCGGCTGGAGGAGCAGAAAGCTGATATCTGCTTCTGCGTGGCACTGACAGTAGTATGTTGAGAAGAAGAAATGATAGAGAGCATATATATACATACCGATTCCCTGGTCCAATTTACAGAATGATACCCTTTGATGTACCCTCAGTTTGATTGACAGCGGGTGTTGCCTTCATTTATAGACCAGGATCAAACATTGACATTAGATTTGTAGAGAAGTTGTATGATAATAATTTTCTTTGCGATTCAATGTATGATGTATCCATGGCTGCCATAGTTAATAATATTCTTGCATAGTCATATTGATCGGCTAATCACCCGTGGATTAGCGTTGTGTCTGTCTTGACAATAAATTTCTACTTGTTGGCTTGTTGCTGTCCAATGCACAATGAATCATCATTCATCGATTTGTGCTGCAACCAACTTTGTGCACATAATATCAGCATGTATTATCACCAAGAGCGTTCTCTTTTGTTACTGTCTGGAAGGACAATGGCAGACAGACATGTTGCTATCGTCGTTCATCAGCAAAGACATTGTGAATAGGGGACAAAGACCAATTAATCAGCGTTGTGGCTACTTGTCCAAGAATGCCGACATAAGAAGGGGACCTTGTGTTTAAGAGAGATTGTTGCATTGCTGCCGACCTGAACCTGCCAAATGGAACGCTCAGCGACAATTTTGCCTCCTTATGACCCCTGAAATGTTGAAAAAATTATGGCTATGTCGCTCCAAAGTCGTCGTGACTTTAGACATACTCTACGTGCCACTGTTTTTAGCAGCACCAGCACGGCATGAGTAGAACCAAAAATATGCAAGCCAACGAATTGACTTCCTCCAGCCTTCAAGTCCCGTGCCACAACCCTCCAAAGTCCAGAGTGTTGAGCTAACGAGATTTATGACCGGTTTGATCCTACCCTTGGAGGAAAGGGAGCACAGTGTTGTCACTTGTGAGATTTCATGTAATGACAATGCAGGAGCAATTCTTAAACGAAGCAA
CDS Sequence
- >LOC_Os07g36170.1
ATGGACTTGCACCAGTTATTAAAGTACAGATTGACTGGCGCTAACGTTGTGTACGAAATTCCTACAGAGAACAACTTGCAAAACTCTCCCTGGCAAGCTAACCCACTGAAGTACGAGTTCAGCGATTCCCCATACACCCCTCTCTCTTCCCAATTTGAGTGTGACAATTTGTCTGCTCTTACCAACACTCCAGATAACCAGAGCTCTACAGAAACCATTTCAGCCCAACCAATCTCCCCATTGGAAGCAGACAGCTCATATAGACAGGCGGGTATTCTTCTCCAGGAGAACATTCAAGTGGGAGCTGATCCGTTGTATGCTACATCAAGACATAATATGCAACACGCCTTACGGGAGATTGAGACTGTTCTGATGGCACCTGATACAGATGATGCAACAACTAGCACCAAGCATGAGTTTGAGGAAATCAAGCCTGCTCAGCTTGTGAGGCAGCGGTCGAGAACATGGAGTCATGAATCACGGCAGCCGTTACCTGGAGTTGGTCGGTCACAGTTTGCATCTGGTGGATACCCCACAGCAAGCTATGAATTTCGTCCAGAGAAACGGCAAAGGGAGTTAAGGGAAGACCCTCAGATAATTGTGAAGCAGCTATTAACCAGGTGTGCTGAGGCTCTGAGTGAGGACAGGACAGAGGAGTTCCATAAGCTTGTTCAGGAGGCTCGTGGAGTGGTCTCAATCAACGGGGAACCAATCCAACGTCTAGGTGCTTACCTACTGGAGGGTTTGGTTGCTAGACATGGAAACTCTGGCACAAACATCTACCGTGCTCTGAAGTGCCGTGAGCCAGAGAGCAAGGAGCTCCTGTCCTACATGAGAATTCTATACAATATCTGCCCTTACTTCAAGTTTGGCTATATGGCAGCCAATGGGGCGATTGCAGAAGCATTGAGAACTGAGAACAATATCCACATAATTGATTTTCAGATTGCTCAAGGGACTCAATGGATCACACTGATACAAGCATTAGCTGCAAGGCCTGGTGGTCCTCCTCGTGTGCGGATCACCGGGATAGATGACCCAGTGTCAGAGTATGCTCGTGGTGAAGGTCTTGACATTGTGGGGAAAATGTTGAAAAGCATGTCTGAAGAATTCAAAATACCTCTGGAGTTTACGCCTCTGTCTGTCTATGCCACACAAGTCACGAAAGAGATGCTTGAGATCAGGCCAGGTGAAGCACTGTCTGTAAACTTCACACTCCAGCTACACCACACCCCGGACGAGAGCGTGGATGTCAACAACCCACGCGATGGTCTGCTCCGGATGGTGAAAGGGCTGTCCCCGAAGGTGACTACTTTGGTAGAGCAGGAGTCACACACCAACACAACGCCTTTCTTGATGAGGTTTGGGGAGACCATGGAGTACTACTCCGCCATGTTCGAGTCGATCGACGCCAACCTGCCGCGGGACAACAAGGAGAGGATCAGCGTGGAGCAGCACTGCCTCGCCAAGGACATCGTCAACATCATCGCCTGCGAGGGGAAGGACAGGGTGGAGAGGCATGAGCTGCTTGGCAAGTGGAAGTCGAGGCTGACCATGGCCGGCTTCAGGCCTTACCCGTTGAGCTCGTACGTCAACTCGGTGATAAGGAAGCTTCTCGCCTGCTACTCCGATAAATACACATTGGATGAGAAGGACGGCGCGATGCTTCTCGGCTGGAGGAGCAGAAAGCTGATATCTGCTTCTGCGTGGCACTGA - >LOC_Os07g36170.2
ATGGACTTGCACCAGTTATTAAAGTACAGATTGACTGGCGCTAACGTTGTGTACGAAATTCCTACAGAGAACAACTTGCAAAACTCTCCCTGGCAAGCTAACCCACTGAAGTACGAGTTCAGCGATTCCCCATACACCCCTCTCTCTTCCCAATTTGAGTGTGACAATTTGTCTGCTCTTACCAACACTCCAGATAACCAGAGCTCTACAGAAACCATTTCAGCCCAACCAATCTCCCCATTGGAAGCAGACAGCTCATATAGACAGGCGGGTATTCTTCTCCAGGAGAACATTCAAGTGGGAGCTGATCCGTTGTATGCTACATCAAGACATAATATGCAACACGCCTTACGGGAGATTGAGACTGTTCTGATGGCACCTGATACAGATGATGCAACAACTAGCACCAAGCATGAGTTTGAGGAAATCAAGCCTGCTCAGCTTGTGAGGCAGCGGTCGAGAACATGGAGTCATGAATCACGGCAGCCGTTACCTGGAGTTGGTCGGTCACAGTTTGCATCTGGTGGATACCCCACAGCAAGCTATGAATTTCGTCCAGAGAAACGGCAAAGGGAGTTAAGGGAAGACCCTCAGATAATTGTGAAGCAGCTATTAACCAGGTGTGCTGAGGCTCTGAGTGAGGACAGGACAGAGGAGTTCCATAAGCTTGTTCAGGAGGCTCGTGGAGTGGTCTCAATCAACGGGGAACCAATCCAACGTCTAGGTGCTTACCTACTGGAGGGTTTGGTTGCTAGACATGGAAACTCTGGCACAAACATCTACCGTGCTCTGAAGTGCCGTGAGCCAGAGAGCAAGGAGCTCCTGTCCTACATGAGAATTCTATACAATATCTGCCCTTACTTCAAGTTTGGCTATATGGCAGCCAATGGGGCGATTGCAGAAGCATTGAGAACTGAGAACAATATCCACATAATTGATTTTCAGATTGCTCAAGGGACTCAATGGATCACACTGATACAAGCATTAGCTGCAAGGCCTGGTGGTCCTCCTCGTGTGCGGATCACCGGGATAGATGACCCAGTGTCAGAGTATGCTCGTGGTGAAGGTCTTGACATTGTGGGGAAAATGTTGAAAAGCATGTCTGAAGAATTCAAAATACCTCTGGAGTTTACGCCTCTGTCTGTCTATGCCACACAAGTCACGAAAGAGATGCTTGAGATCAGGCCAGGTGAAGCACTGTCTGTAAACTTCACACTCCAGCTACACCACACCCCGGACGAGAGCGTGGATGTCAACAACCCACGCGATGGTCTGCTCCGGATGGTGAAAGGGCTGTCCCCGAAGGTGACTACTTTGGTAGAGCAGGAGTCACACACCAACACAACGCCTTTCTTGATGAGGTTTGGGGAGACCATGGAGTACTACTCCGCCATGTTCGAGTCGATCGACGCCAACCTGCCGCGGGACAACAAGGAGAGGATCAGCGTGGAGCAGCACTGCCTCGCCAAGGACATCGTCAACATCATCGCCTGCGAGGGGAAGGACAGGGTGGAGAGGCATGAGCTGCTTGGCAAGTGGAAGTCGAGGCTGACCATGGCCGGCTTCAGGCCTTACCCGTTGAGCTCGTACGTCAACTCGGTGATAAGGAAGCTTCTCGCCTGCTACTCCGATAAATACACATTGGATGAGAAGGACGGCGCGATGCTTCTCGGCTGGAGGAGCAGAAAGCTGATATCTGCTTCTGCGTGGCACTGA
Protein Sequence
- >LOC_Os07g36170.1
MDLHQLLKYRLTGANVVYEIPTENNLQNSPWQANPLKYEFSDSPYTPLSSQFECDNLSALTNTPDNQSSTETISAQPISPLEADSSYRQAGILLQENIQVGADPLYATSRHNMQHALREIETVLMAPDTDDATTSTKHEFEEIKPAQLVRQRSRTWSHESRQPLPGVGRSQFASGGYPTASYEFRPEKRQRELREDPQIIVKQLLTRCAEALSEDRTEEFHKLVQEARGVVSINGEPIQRLGAYLLEGLVARHGNSGTNIYRALKCREPESKELLSYMRILYNICPYFKFGYMAANGAIAEALRTENNIHIIDFQIAQGTQWITLIQALAARPGGPPRVRITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLSVYATQVTKEMLEIRPGEALSVNFTLQLHHTPDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAWH* - >LOC_Os07g36170.2
MDLHQLLKYRLTGANVVYEIPTENNLQNSPWQANPLKYEFSDSPYTPLSSQFECDNLSALTNTPDNQSSTETISAQPISPLEADSSYRQAGILLQENIQVGADPLYATSRHNMQHALREIETVLMAPDTDDATTSTKHEFEEIKPAQLVRQRSRTWSHESRQPLPGVGRSQFASGGYPTASYEFRPEKRQRELREDPQIIVKQLLTRCAEALSEDRTEEFHKLVQEARGVVSINGEPIQRLGAYLLEGLVARHGNSGTNIYRALKCREPESKELLSYMRILYNICPYFKFGYMAANGAIAEALRTENNIHIIDFQIAQGTQWITLIQALAARPGGPPRVRITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLSVYATQVTKEMLEIRPGEALSVNFTLQLHHTPDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAWH*