Information report for OsbHLH057
Gene Details
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Functional Descriptions
- Using a DNA pull-down assay coupled with mass spectrometry, a basic helix-loop-helix (bHLH) transcription factor OsbHLH057 was determined to interact with the AATCA cis-element.
- OsbHLH057 targets the AATCA cis-element to regulate disease resistance and drought tolerance in rice.
- OsbHLH057 bound to the motif to positively regulate rice disease resistance and drought tolerance.
- Furthermore, overexpressing OsbHLH057 enhanced rice disease resistance and drought tolerance, while knocking out OsbHLH057 made rice more susceptible to pathogens and drought.
- bHLH57 confers chilling tolerance and grain yield improvement in rice.
- OsbHLH057 was highly expressed in the leaf blades and lowly expressed in the roots; it was mainly expressed in the stele and highly expressed in the lateral roots.
- The bHLH Transcription Factor OsbHLH057 Regulates Iron Homeostasis in Rice.
- Under Fe-sufficient conditions, OsbHLH057 knockout or overexpression lines increased or decreased the shoot Fe concentration and the expression of several Fe homeostasis-related genes, respectively.
- Under Fe-deficient conditions, plants with an OsbHLH057 mutation showed susceptibility to Fe deficiency and accumulated lower Fe concentrations in the shoot compared with the wild type.
- OsbHLH057 localised in the nucleus exhibited transcriptional activation activity.
- Here, we report that OsbHLH057 is involved in regulating Fe homeostasis in rice.
- In addition, OsbHLH057 was slightly induced by Fe deficiency in the shoots on the first day but was not affected by Fe availability in the roots.
- These results indicate that OsbHLH057 plays a positive role in regulating Fe homeostasis, at least under Fe-sufficient conditions.
Functional Keywords
- transcription-factor , resistance , disease , disease-resistance , drought , tolerance , drought-tolerance , chilling-tolerance , grain-yield , leaf , shoot , nucleus , homeostasis , lateral-root , iron , Fe , iron-homeostasis , Fe-homeostasis
Literature and News
- OsbHLH057 targets the AATCA cis-element to regulate disease resistance and drought tolerance in rice . DOI: 10.1007/s00299-022-02859-w ; PMID: 35278106
- bHLH57 confers chilling tolerance and grain yield improvement in rice . DOI: 10.1111/pce.14513 ; PMID: 36510797
- The bHLH Transcription Factor OsbHLH057 Regulates Iron Homeostasis in Rice . DOI: 10.3390/ijms232314869 ; PMID: 36499202
Gene Resources
- UniProt: A0A0N7KNL9
- EMBL: AP014963
- AlphaFoldDB: A0A0N7KNL9
- EnsemblPlants: Os07t0543000-02
- Gramene: Os07t0543000-02
- Orthologous matrix: LPENTNW
- InterPro: IPR011598, IPR036638, IPR044818
- PANTHER: PTHR46133, PTHR46133:SF28
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- SWISS-MODEL: A0A0N7KNL9
- Conserved Domain Database: cd11446
Sequences
cDNA Sequence
- >LOC_Os07g35870.2
ACCGCCCCGAATCCGCCCCCAAATCTCCTCGCGACCTCGAAACCCTAGCCTCCTCCGGCCACCGTCGCCGGCCACGGTGAGCGGCCCCACCCCCCCGCAGCCATGGCCTCCCCGGAGGGCTCCACGTGGGTCTTCGACTGCCCTCTGATGGACGACCTCGCCGCCGCCGCCGGCTTCGACGCCGCCCCCGCCGGAGGCTTCTACTGGACGACGCCCGCTCCTCCGCAGGCGGCGCTACAGCCGCCGCCGCCGCAGCAGCAGCCCGTCGCCCCTGCCACCGCGGCTCCGAACGCCTGGTAATTGCGGGGTTTACGGCCTCCGATCGCGCTCCAGCCAGCCCTGGCTGGGCCCGGTGCCGTGGTCTGGGGTGCTACATTTTTTTTTCGTCCTGATTTGTCGCGGCAGCGTGTTAGTGCGTAAGTTGAGACTGGGTATATCGTGATCGTTGCTATTGATTGTTCGATTGGAGGTCGATAGAAGCGTATCATATCAGACTATCAGTGGGATTCGGATTAGGGGATTAGCCATTGAGTGTGTCTGAACATGTAGAACTAGTTACGTACTCCCTCCGTTTTCTAAAATATGACACCACTGACTTTTCAAAATACACTTGAACATTCATCTTATTCAAAAAATTTATGTAATTATTATTTGTTTTATTGTGACTTGATTTATCGTCAAATATTCTTTAAGCATGACTTAAATTTTTTATATTTGCACAAAAATTTTGAAGACGACGAATAGTCAAACGTTTATCAAAAAGTCAACGACGTCATACATTAACAAACGGAGGTAGTATAACTTAGTAGGAGCCGTCAGCCTGTTTTACTGAACAGAGGGCTCAATTCCTGGTTATATTGAATTGTCAGCTTCATTTTCAAATCTATTTATTTGTGTGCATACGTAATGTATTTAAACCTAATTTAGGGCCTCTTCATGATTTATAATTCTCATTTTAATTGTGATGCAAATGCTGCATAGCATAGCATATATAGTTTGCTAAGCATGCATTGTGTCATGTTTATCTGGTGTCATGTCATGGGATAGTTGAACTGAAGAAAACATACACCATAATTGATGATGTTTATGATGCCACTATTGTACAAGATTCAGTTTGCCGTGTAATATTACAATATAAGAACTGATAACAAGTAAACCAAATGGTGTCAAATTGGCGTGGTGGTGGGAGGGTGGATGGTTGTGATTTGCTGTAGGTCCAACTGTCTGAGATACCAGATTTTAAAATTTTTTGTATCTATATGCAAGTAAATTGCATTGACATGATATTTTGAGCCAGGTATTGAGATTTGTCCTGAGCTTTCCAGTGGATTTTTCAATGAATGATCTATGAAGGATCAGAAACGGGGTGAGAGAAGTGGTTAATCTGTATCACTTGGGTTCCAGCACGAAGCTTACTGTGGAATGGAAATTTATTGAAGAACGTGTTCATGTTAGGATATTGTTTACTGCAACTCTTTGATTTAAGAGTATTCTTTTATTTATGATACCTTGTAGTCTTGTGGTGCTAGTACATTTTCTTTATGCACCAGGAAGTCATCTCATGTGTTTTTAAATCTGTCCTGGTTTTTGACTTGTGCTTCCACCTTCTGGTGCCATAGGTTGTGGTGTTATGAACCACACAGTGCATCTTAACTGATGTATTGTTCTGTTGTGTTAAATTTGCTTGATTCTTTTGTTGTCATTGTATAGTTTTTTATGTACTTATTGCTGTATATTATCGTGACATATGGCATACTGAAGTACAAGTTTATTTTTTTCACCAGTGCTGAAATCAATGGCTCTGTGGACTGTGAACATGGCAAAGAACAGCCAACAAATAAACGTCCGAGATCAGAAAGTGGCACTCGACCAAGCTCCAAAGCATGCAGGGAAAAAGTAAGAAGGGACAAGTTGAACGAGAGGTTCTTGGAACTGGGTGCTGTCCTGGAACCAGGGAAGACACCCAAAATGGACAAATCGTCTATATTGAACGATGCTATTCGTGTAATGGCTGAGCTGCGTAGTGAGGCACAGAAGTTGAAGGAATCAAATGAGAGTCTCCAAGAGAAAATCAAAGAGTTGAAGGCTGAGAAAAACGAGCTGCGTGATGAGAAGCAAAAGCTGAAGGCAGAGAAAGAGAGCCTGGAGCAGCAGATAAAGTTCCTGAATGCTCGACCAAGCTTCGTACCACACCCTCCGGTTATCCCAGCCAGTGCATTCACTGCTCCTCAAGGGCAAGCTGCCGGGCAGAAGCTGATGATGCCTGTGATTGGCTACCCAGGATTTCCGATGTGGCAGTTCATGCCGCCTTCTGATGTTGATACCACAGATGACACCAAGTCATGCCCTCCTGTTGCATAAGTCAAAGCAAAGATCAATTTGCCTCGCCTTGTAGGAAAGAGGTGAAACTGCCTTCCATTCAAGCCCAGTTTGGTCGTCAGTGTTTAAACTACCTAGCTAATCCCAGGATTAAACCGAAGCTTCGCTGTATCGAAGTATCAACCGGTGACATGTGAACTGACGAAAGATGACACCGTTGTATATTACATATTAGTAAATAAATTCCATCTGTCCAATTAAATGAGAATTAGATGCCATATAATTATATCCCACCGTGTTTTGACCATTGAGAAGCATAATTGGGTTATTGGTGGCCATGTCCGAAGAAAAGGAAAACAATATATAATTGGGTTATTGGTGGCCATGTCCGAAGAAAAGGAAAACAA - >LOC_Os07g35870.1
ACCGCCCCGAATCCGCCCCCAAATCTCCTCGCGACCTCGAAACCCTAGCCTCCTCCGGCCACCGTCGCCGGCCACGGTGAGCGGCCCCACCCCCCCGCAGCCATGGCCTCCCCGGAGGGCTCCACGTGGGTCTTCGACTGCCCTCTGATGGACGACCTCGCCGCCGCCGCCGGCTTCGACGCCGCCCCCGCCGGAGGCTTCTACTGGACGACGCCCGCTCCTCCGCAGGCGGCGCTACAGCCGCCGCCGCCGCAGCAGCAGCCCGTCGCCCCTGCCACCGCGGCTCCGAACGCCTGGTAATTGCGGGGTTTACGGCCTCCGATCGCGCTCCAGCCAGCCCTGGCTGGGCCCGGTGCCGTGGTCTGGGGTGCTACATTTTTTTTTCGTCCTGATTTGTCGCGGCAGCGTGTTAGTGCGTAAGTTGAGACTGGGTATATCGTGATCGTTGCTATTGATTGTTCGATTGGAGGTCGATAGAAGCGTATCATATCAGACTATCAGTGGGATTCGGATTAGGGGATTAGCCATTGAGTGTGTCTGAACATGTAGAACTAGTTACGTACTCCCTCCGTTTTCTAAAATATGACACCACTGACTTTTCAAAATACACTTGAACATTCATCTTATTCAAAAAATTTATGTAATTATTATTTGTTTTATTGTGACTTGATTTATCGTCAAATATTCTTTAAGCATGACTTAAATTTTTTATATTTGCACAAAAATTTTGAAGACGACGAATAGTCAAACGTTTATCAAAAAGTCAACGACGTCATACATTAACAAACGGAGGTAGTATAACTTAGTAGGAGCCGTCAGCCTGTTTTACTGAACAGAGGGCTCAATTCCTGGTTATATTGAATTGTCAGCTTCATTTTCAAATCTATTTATTTGTGTGCATACGTAATGTATTTAAACCTAATTTAGGGCCTCTTCATGATTTATAATTCTCATTTTAATTGTGATGCAAATGCTGCATAGCATAGCATATATAGTTTGCTAAGCATGCATTGTGTCATGTTTATCTGGTGTCATGTCATGGGATAGTTGAACTGAAGAAAACATACACCATAATTGATGATGTTTATGATGCCACTATTGTACAAGATTCAGTTTGCCGTGTAATATTACAATATAAGAACTGATAACAAGTAAACCAAATGGTGTCAAATTGGCGTGGTGGTGGGAGGGTGGATGGTTGTGATTTGCTGTAGGTCCAACTGTCTGAGATACCAGATTTTAAAATTTTTTGTATCTATATGCAAGTAAATTGCATTGACATGATATTTTGAGCCAGGTATTGAGATTTGTCCTGAGCTTTCCAGTGGATTTTTCAATGAATGATCTATGAAGGATCAGAAACGGGGTGAGAGAAGTGGTTAATCTGTATCACTTGGGTTCCAGCACGAAGCTTACTGTGGAATGGAAATTTATTGAAGAACGTGTTCATGTTAGGATATTGTTTACTGCAACTCTTTGATTTAAGAGTATTCTTTTATTTATGATACCTTGTAGTCTTGTGGTGCTAGTACATTTTCTTTATGCACCAGGAAGTCATCTCATGTGTTTTTAAATCTGTCCTGGTTTTTGACTTGTGCTTCCACCTTCTGGTGCCATAGGTTGTGGTGTTATGAACCACACAGTGCATCTTAACTGATGTATTGTTCTGTTGTGTTAAATTTGCTTGATTCTTTTGTTGTCATTGTATAGTTTTTTATGTACTTATTGCTGTATATTATCGTGACATATGGCATACTGAAGTACAAGTTTATTTTTTTCACCAGTGCTGAAATCAATGGCTCTGTGGACTGTGAACATGGCAAAGAACAGCCAACAAATAAACGTCCGAGATCAGAAAGTGGCACTCGACCAAGCTCCAAAGCATGCAGGGAAAAAGTAAGAAGGGACAAGTTGAACGAGAGGTTCTTGGAACTGGGTGCTGTCCTGGAACCAGGGAAGACACCCAAAATGGACAAATCGTCTATATTGAACGATGCTATTCGTGTAATGGCTGAGCTGCGTAGTGAGGCACAGAAGTTGAAGGAATCAAATGAGAGTCTCCAAGAGAAAATCAAAGAGTTGAAGGCTGAGAAAAACGAGCTGCGTGATGAGAAGCAAAAGCTGAAGGCAGAGAAAGAGAGCCTGGAGCAGCAGATAAAGTTCCTGAATGCTCGACCAAGCTTCGTACCACACCCTCCGGTTATCCCAGCCAGTGCATTCACTGCTCCTCAAGGGCAAGCTGCCGGGCAGAAGCTGATGATGCCTGTGATTGGCTACCCAGGATTTCCGATGTGGCAGTTCATGCCGCCTTCTGATGTTGATACCACAGATGACACCAAGTCATGCCCTCCTGTTGCATAAGTCAAAGCAAAGATCAATTTGCCTCGCCTTGTAGGAAAGAGGTGAAACTGCCTTCCATTCAAGCCCAGTTTGGTCGTCAGTGTTTAAACTACCTAGCTAATCCCAGGATTAAACCGAAGCTTCGCTGTATCGAAGTATCAACCGGTGACATGTGAACTGACGAAAGATGACACCGTTGTATATTACATATTAGTAAATAAATTCCATCTGTCCAATTAAATGAGAATTAGATGCCATATAATTATATCCCACCGTGTTTTGACCATTGAGAAGCATAATTGGGTTATTGGTGGCCATGTCCGAAGAAAAGGAAAACAATATATAATTGGGTTATTGGTGGCCATGTCCGAAGAAAAGGAAAACAA
CDS Sequence
- >LOC_Os07g35870.2
ATGTACTTATTGCTGTATATTATCGTGACATATGGCATACTGAAGTACAAGTTTATTTTTTTCACCAGTGCTGAAATCAATGGCTCTGTGGACTGTGAACATGGCAAAGAACAGCCAACAAATAAACGTCCGAGATCAGAAAGTGGCACTCGACCAAGCTCCAAAGCATGCAGGGAAAAAGTAAGAAGGGACAAGTTGAACGAGAGGTTCTTGGAACTGGGTGCTGTCCTGGAACCAGGGAAGACACCCAAAATGGACAAATCGTCTATATTGAACGATGCTATTCGTGTAATGGCTGAGCTGCGTAGTGAGGCACAGAAGTTGAAGGAATCAAATGAGAGTCTCCAAGAGAAAATCAAAGAGTTGAAGGCTGAGAAAAACGAGCTGCGTGATGAGAAGCAAAAGCTGAAGGCAGAGAAAGAGAGCCTGGAGCAGCAGATAAAGTTCCTGAATGCTCGACCAAGCTTCGTACCACACCCTCCGGTTATCCCAGCCAGTGCATTCACTGCTCCTCAAGGGCAAGCTGCCGGGCAGAAGCTGATGATGCCTGTGATTGGCTACCCAGGATTTCCGATGTGGCAGTTCATGCCGCCTTCTGATGTTGATACCACAGATGACACCAAGTCATGCCCTCCTGTTGCATAA - >LOC_Os07g35870.1
ATGTACTTATTGCTGTATATTATCGTGACATATGGCATACTGAAGTACAAGTTTATTTTTTTCACCAGTGCTGAAATCAATGGCTCTGTGGACTGTGAACATGGCAAAGAACAGCCAACAAATAAACGTCCGAGATCAGAAAGTGGCACTCGACCAAGCTCCAAAGCATGCAGGGAAAAAGTAAGAAGGGACAAGTTGAACGAGAGGTTCTTGGAACTGGGTGCTGTCCTGGAACCAGGGAAGACACCCAAAATGGACAAATCGTCTATATTGAACGATGCTATTCGTGTAATGGCTGAGCTGCGTAGTGAGGCACAGAAGTTGAAGGAATCAAATGAGAGTCTCCAAGAGAAAATCAAAGAGTTGAAGGCTGAGAAAAACGAGCTGCGTGATGAGAAGCAAAAGCTGAAGGCAGAGAAAGAGAGCCTGGAGCAGCAGATAAAGTTCCTGAATGCTCGACCAAGCTTCGTACCACACCCTCCGGTTATCCCAGCCAGTGCATTCACTGCTCCTCAAGGGCAAGCTGCCGGGCAGAAGCTGATGATGCCTGTGATTGGCTACCCAGGATTTCCGATGTGGCAGTTCATGCCGCCTTCTGATGTTGATACCACAGATGACACCAAGTCATGCCCTCCTGTTGCATAA
Protein Sequence
- >LOC_Os07g35870.2
MYLLLYIIVTYGILKYKFIFFTSAEINGSVDCEHGKEQPTNKRPRSESGTRPSSKACREKVRRDKLNERFLELGAVLEPGKTPKMDKSSILNDAIRVMAELRSEAQKLKESNESLQEKIKELKAEKNELRDEKQKLKAEKESLEQQIKFLNARPSFVPHPPVIPASAFTAPQGQAAGQKLMMPVIGYPGFPMWQFMPPSDVDTTDDTKSCPPVA* - >LOC_Os07g35870.1
MYLLLYIIVTYGILKYKFIFFTSAEINGSVDCEHGKEQPTNKRPRSESGTRPSSKACREKVRRDKLNERFLELGAVLEPGKTPKMDKSSILNDAIRVMAELRSEAQKLKESNESLQEKIKELKAEKNELRDEKQKLKAEKESLEQQIKFLNARPSFVPHPPVIPASAFTAPQGQAAGQKLMMPVIGYPGFPMWQFMPPSDVDTTDDTKSCPPVA*