Gene Details:

• MSU gene ID: LOC_Os07g31450
• RAPdb gene ID: Os07g0497100 ,Os07g0497000
• Gene Symbol: CHR729 OsCHD3 CRL6 RFS
• Genome: MSU7 ,  IRGSP-1.0
• Species: Oryza sativa

Functional Descriptions:

• CHR729 Is a CHD3 Protein That Controls Seedling Development in Rice.
• These results suggest that the rice CHD3 protein CHR729 plays an important role in many aspects of seedling development and controls this development via the gibberellin pathway.
• CHR729 encoded a nuclear protein and was expressed in almost all organs.
• Realtime RT-PCR analysis showed that CRL6 was most highly expressed in the stem base region where crown roots initiated.
• Histological analysis showed that CRL6 influences crown root formation by regulating primordial initiation and development.
• Our results provide evidence that CRL6 plays an important role in crown root development in rice via auxin-related signaling pathway.
• In addition, auxin-action inhibited phenotype was observed during CRL6 development.
• Map-based cloning and subsequent complementation tests verified that the CRL6 gene encodes a member of the large chromodomain, helicase/ATPase, and DNA-binding domain (CHD) family protein.
• Our results suggest that RFS is required for many aspects of plant development and its function is closely associated with epigenetic regulation of genes that modulate ROS homeostasis.

Function-related keywords:

• seedling ,  development ,  gibberellin ,  R-protein ,  Gibberellin ,  stem ,  root ,  map-based-cloning ,  crown-root-development ,  root-development ,  crown ,  crown-root ,  homeostasis ,  plant-development

Literature:

• CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome .  DOI:  10.1073/pnas.1203148109 ;  PMID:  22451926
• CHR729 Is a CHD3 Protein That Controls Seedling Development in Rice .  DOI:  10.1371/journal.pone.0138934 ;  PMID:  26398683
• CRL6, a member of the CHD protein family, is required for crown root development in rice .  DOI:  10.1016/j.plaphy.2016.04.022 ;  PMID:  27108205
• CRL6, a member of the CHD protein family, is required for crown root development in rice .  DOI:  10.1016/j.plaphy.2016.04.022 ;  PMID:  27108205
• The Rice Rolled Fine Striped (RFS) CHD3/Mi-2 Chromatin Remodeling Factor Epigenetically Regulates Genes Involved in Oxidative Stress Responses During Leaf Development .  DOI:  10.3389/fpls.2018.00364 ;  PMID:  29616070
• A Chromodomain-Helicase-DNA-Binding Factor Functions in Chromatin Modification and Gene Regulation .  DOI:  10.1104/pp.20.00453 ;  PMID:  32439720

Related News:

Gene Resources:

• NCBI ID: AK103233
• UniProt accessions:

Sequences: