Gene Details:

Functional Descriptions:

  • Under natural field conditions, the leaves of LIL1 mutant plants exhibited light-induced, small, rust-red lesions that first appeared at the leaf tips and subsequently expanded throughout the entire leaf blade to the leaf sheath.
  • The LIL1 mutants also displayed increased expression of defense-related genes and enhanced resistance to rice blast fungus (Magnaporthe grisea).
  • Thus, LIL1 is a novel LMM in rice that will facilitate the further study of the molecular mechanisms of HR and the rice blast resistance.
  • Histochemical staining indicated that LIL1 lesions displayed an abnormal accumulation of reactive oxygen species (ROS) and resulted from programmed cell death (PCD).
  • Sequence analysis of these 12 candidate genes revealed a G to A base substitution in the fourth exon of LOC_Os07g30510, a putative cysteine-rich receptor-like kinase (CRK), which led to an amino acid change (Val 429 to Ile) in the LIL1 protein.
  • Lesion mimic mutants (LMMs), such as LIL1 that was identified in an ethylmethane sulfonate mutagenized population of Indica rice (Oryza sativa L.
  • Overexpression of the LOC_Os07g30510 gene from LIL1 induced a LIL1-like lesion phenotype in Nipponbare.
  • A semi-dominant lesion mimic mutant ALS1 (apoptosis leaf and sheath 1) in rice was identified to demonstrate spontaneous lesions on the leaf blade and sheath.
  • ALS1 was expressed mainly in the leaf blade and sheath, in which further study revealed that ALS1 was present in the vascular bundles.
  • Functional studies of ALS1 were conducted, including phylogenetic analysis, expression analysis, subcellular location and blast resistance identification.
  • The mutation of ALS1 caused a constitutively activated defence response in ALS1.
  • The results of our study imply that ALS1 participate in a defence response resembling the common SA-, JA- and NH1- mediated defence responses in rice.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os07g30510.1
    ATGGCCATTTTGACCGTTCTGCCGCTGGTCTTGGTGATGCTGCTGCTTCCGTTGGCTGCAATTGCATCCGGCGACCCACCATGGCAGCACTACTGCGGAAGCAGCGGCAACTACACGGCCGGGAGCAAATACCAGGCCAACCTGCAGGCCCTCGCCGCGACCCTCCCGTCGACCGCGTCGTCTTCCTCCCCCGCACTCTTCGCCAAGGACGCCGCCGGCGGCGGCGACGCCGAGCCCGACAGGGTGTTCGCCCTGACCCTCTGCAGAGGCGACACCGCCTCCGCCAACGCCTCGTCGTCGTCGTGCGCCGACTGCGCCTCCCGCGCCTTCCGCGACGCGCAGAGCGTGTGCCCCTACAGCAAGGAGGTGGCCGTCTACTACGACCCCTGCCTCCTCTACTTCTCCGGCGACGACTTCCTCTCCTCTCCGGCCAACCCGGCCCAGGTGAGGCTCTACGACGTCGATCGCTCCACCCGGCGTGGCGGCGGCGGCGCCGACTTCGTCACCCTCGTGAGGGCGCTCCTGAGCTACACGATGCAGTGGGCCGTGCCGTACAATTCCACGGGCGGCGGGGCCGCCGCCGTGAGGTGGTACACCACGGTGCGGATGGACGTCGTCACGCCGCCGCTGTTCTCGCTGATGCAGTGCACGCCGGACATGTCCGGCGGCGACTGCCGGCAGTGCCTGCAGGACCTCGTCGGCAACACCACCTTCAACGGCTCGGTCTCCGGCGTGCGCAACATCGGCGCCCGTTGCGGTTACAGGTACGACACGTACAAGTTCTACGGCGGGGAGCCCAAGCTGAAGATCGGGTCACTGTCGGAGATCAACTCAACGGCGCCATCGAGCCCACCGCCGCCTCCGCCGGTGACGGAGACACGTTCCGGGAGAAAGAAGGTGTTGACAGTTGCTTTGCTTGTGCCACTGATAGCACTTTGCCCTGTCGTCATATTCTGTTTTGCATGGATAAGGAGATTAAGAAACCACAAATCAATGTTGCGAAAAAAGGATACAATGGCCAGAGAAGAAGTATTAAAGCTTTGGAGACTAGAAGAAAGCGATTCAGAGTTTATGCTATTTGATTTCTCTCAGATAGAAGATGCTACTAGCAACTTCTCGGAAGATAAGAAACTTGGAGAAGGAGGTTTTGGCTCCGTATACAAGGGCCAATTGCCCAATGGGCTTGAGGTAGCAGTTAAGCGACTTGCTGCACATTCAAGTCAAGGCCTGGTTGAGTTCAAAAATGAAATTCAACTTATTGCAAAGCTACAACATACCAATTTAGTAAACCTTCGAGGATGTTGCATTCAAGGAGAAGAGAACTTACTAATATATGAATACATGCCAAACAAGAGTTTAGACTTCTTCATCTTTGATCTGAAAAGAGCAGCATTGCTCAACTGGAAAACACGCCTGAACATAATAGAAGGAATAACACAAGGGCTTTTGTATCTCCACAAACACTCCCGGTTATGCATCATACATAGAGACTTAAAAGCAAGCAATATTCTACTAGACCGTGACATGAATCCTAAAATCTCTGACTTTGGGTTAGCTAAGATATTTGACTCAAATGATGTCCAAAGAAATACAAAAAGGGTGGTGGGCACTTATGGGTATATGGCTCCTGAGTATGCATCTGAGGGTTGCTTCTCGCTGAAATCGGATGTCTTTAGCTTTGGAGTTCTGGTTCTTGAGATTATTAGTGGGAAAAGAAACGCTGGGTTTCACCAATATGGGGACTTCTTCAACCTCCTTGGCTATGCATGGCAGCTATGGAAGGATGGAAGTTGGCATGAACTTGTAGATCCATCATTAGTAAGTGAAGGTCAAATGATGGAAATAAAGAAATGTATGAAAGTTGCACTTTTATGTGTTCAAGAGAATGCGGTTGATCGTCCCACCATGTCCGCAGTTGTTAAGATGCTTTCAAGCGAGTTGAAAATTCTACCTGAGCCCAAACAACCAGCATTCTTTAATGTAAGGGTGAAACATGGAGAGCTGTCTAATACTGCACCTAGTAGCATAAACGATGTAACCATAACAATTGTGAACGGCAGGTAA
CDS Sequence
  • >LOC_Os07g30510.1
    ATGGCCATTTTGACCGTTCTGCCGCTGGTCTTGGTGATGCTGCTGCTTCCGTTGGCTGCAATTGCATCCGGCGACCCACCATGGCAGCACTACTGCGGAAGCAGCGGCAACTACACGGCCGGGAGCAAATACCAGGCCAACCTGCAGGCCCTCGCCGCGACCCTCCCGTCGACCGCGTCGTCTTCCTCCCCCGCACTCTTCGCCAAGGACGCCGCCGGCGGCGGCGACGCCGAGCCCGACAGGGTGTTCGCCCTGACCCTCTGCAGAGGCGACACCGCCTCCGCCAACGCCTCGTCGTCGTCGTGCGCCGACTGCGCCTCCCGCGCCTTCCGCGACGCGCAGAGCGTGTGCCCCTACAGCAAGGAGGTGGCCGTCTACTACGACCCCTGCCTCCTCTACTTCTCCGGCGACGACTTCCTCTCCTCTCCGGCCAACCCGGCCCAGGTGAGGCTCTACGACGTCGATCGCTCCACCCGGCGTGGCGGCGGCGGCGCCGACTTCGTCACCCTCGTGAGGGCGCTCCTGAGCTACACGATGCAGTGGGCCGTGCCGTACAATTCCACGGGCGGCGGGGCCGCCGCCGTGAGGTGGTACACCACGGTGCGGATGGACGTCGTCACGCCGCCGCTGTTCTCGCTGATGCAGTGCACGCCGGACATGTCCGGCGGCGACTGCCGGCAGTGCCTGCAGGACCTCGTCGGCAACACCACCTTCAACGGCTCGGTCTCCGGCGTGCGCAACATCGGCGCCCGTTGCGGTTACAGGTACGACACGTACAAGTTCTACGGCGGGGAGCCCAAGCTGAAGATCGGGTCACTGTCGGAGATCAACTCAACGGCGCCATCGAGCCCACCGCCGCCTCCGCCGGTGACGGAGACACGTTCCGGGAGAAAGAAGGTGTTGACAGTTGCTTTGCTTGTGCCACTGATAGCACTTTGCCCTGTCGTCATATTCTGTTTTGCATGGATAAGGAGATTAAGAAACCACAAATCAATGTTGCGAAAAAAGGATACAATGGCCAGAGAAGAAGTATTAAAGCTTTGGAGACTAGAAGAAAGCGATTCAGAGTTTATGCTATTTGATTTCTCTCAGATAGAAGATGCTACTAGCAACTTCTCGGAAGATAAGAAACTTGGAGAAGGAGGTTTTGGCTCCGTATACAAGGGCCAATTGCCCAATGGGCTTGAGGTAGCAGTTAAGCGACTTGCTGCACATTCAAGTCAAGGCCTGGTTGAGTTCAAAAATGAAATTCAACTTATTGCAAAGCTACAACATACCAATTTAGTAAACCTTCGAGGATGTTGCATTCAAGGAGAAGAGAACTTACTAATATATGAATACATGCCAAACAAGAGTTTAGACTTCTTCATCTTTGATCTGAAAAGAGCAGCATTGCTCAACTGGAAAACACGCCTGAACATAATAGAAGGAATAACACAAGGGCTTTTGTATCTCCACAAACACTCCCGGTTATGCATCATACATAGAGACTTAAAAGCAAGCAATATTCTACTAGACCGTGACATGAATCCTAAAATCTCTGACTTTGGGTTAGCTAAGATATTTGACTCAAATGATGTCCAAAGAAATACAAAAAGGGTGGTGGGCACTTATGGGTATATGGCTCCTGAGTATGCATCTGAGGGTTGCTTCTCGCTGAAATCGGATGTCTTTAGCTTTGGAGTTCTGGTTCTTGAGATTATTAGTGGGAAAAGAAACGCTGGGTTTCACCAATATGGGGACTTCTTCAACCTCCTTGGCTATGCATGGCAGCTATGGAAGGATGGAAGTTGGCATGAACTTGTAGATCCATCATTAGTAAGTGAAGGTCAAATGATGGAAATAAAGAAATGTATGAAAGTTGCACTTTTATGTGTTCAAGAGAATGCGGTTGATCGTCCCACCATGTCCGCAGTTGTTAAGATGCTTTCAAGCGAGTTGAAAATTCTACCTGAGCCCAAACAACCAGCATTCTTTAATGTAAGGGTGAAACATGGAGAGCTGTCTAATACTGCACCTAGTAGCATAAACGATGTAACCATAACAATTGTGAACGGCAGGTAA
Protein Sequence
  • >LOC_Os07g30510.1
    MAILTVLPLVLVMLLLPLAAIASGDPPWQHYCGSSGNYTAGSKYQANLQALAATLPSTASSSSPALFAKDAAGGGDAEPDRVFALTLCRGDTASANASSSSCADCASRAFRDAQSVCPYSKEVAVYYDPCLLYFSGDDFLSSPANPAQVRLYDVDRSTRRGGGGADFVTLVRALLSYTMQWAVPYNSTGGGAAAVRWYTTVRMDVVTPPLFSLMQCTPDMSGGDCRQCLQDLVGNTTFNGSVSGVRNIGARCGYRYDTYKFYGGEPKLKIGSLSEINSTAPSSPPPPPPVTETRSGRKKVLTVALLVPLIALCPVVIFCFAWIRRLRNHKSMLRKKDTMAREEVLKLWRLEESDSEFMLFDFSQIEDATSNFSEDKKLGEGGFGSVYKGQLPNGLEVAVKRLAAHSSQGLVEFKNEIQLIAKLQHTNLVNLRGCCIQGEENLLIYEYMPNKSLDFFIFDLKRAALLNWKTRLNIIEGITQGLLYLHKHSRLCIIHRDLKASNILLDRDMNPKISDFGLAKIFDSNDVQRNTKRVVGTYGYMAPEYASEGCFSLKSDVFSFGVLVLEIISGKRNAGFHQYGDFFNLLGYAWQLWKDGSWHELVDPSLVSEGQMMEIKKCMKVALLCVQENAVDRPTMSAVVKMLSSELKILPEPKQPAFFNVRVKHGELSNTAPSSINDVTITIVNGR*