Information report for IRE1;OsIRE1
Gene Details
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Functional Descriptions
- The endoplasmic reticulum (ER) stress sensor IRE1 transduces signals by inducing the unconventional splicing of mRNAs encoding key transcription factors: HAC1 in yeast and XBP1 in animals.
- This study demonstrates that the Oryza sativa (rice) OsbZIP50 transcription factor, an orthologue of Arabidopsis AtbZIP60, is regulated by IRE1-mediated splicing of its RNA.
- OsbZIP50 mRNA is spliced in a similar manner to HAC1 and XBP1 mRNAs; however, this splicing has very different effects on the translation products, a finding that shows the diversity of IRE1-related transcription factors in eukaryotes.
Functional Keywords
Literature and News
- Cis-element of the rice PDIL2-3 promoter is responsible for inducing the endoplasmic reticulum stress response . DOI: 10.1016/j.jbiosc.2013.10.023 ; PMID: 24315532
- Expression of OsBiP4 and OsBiP5 is highly correlated with the endoplasmic reticulum stress response in rice . DOI: 10.1007/s00425-012-1714-y ; PMID: 22824965
- Signal transduction by IRE1-mediated splicing of bZIP50 and other stress sensors in the endoplasmic reticulum stress response of rice . DOI: 10.1111/j.1365-313X.2011.04844.x ; PMID: 22050533
- Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses . DOI: 10.1093/mp/ssr115 ; PMID: 22199238
- Isolation and characterization of a putative transducer of endoplasmic reticulum stress in Oryza sativa . DOI: 10.1093/pcp/pcf063 ; PMID: 12040100
- Multiple roles of the ER stress sensor IRE1 demonstrated by gene targeting in rice . DOI: 10.1038/srep00944 ; PMID: 23230509
Gene Resources
- UniProt: Q7XIT1
- EMBL: AB031396, AK068617, AP003806
- AlphaFoldDB: Q7XIT1
- EnsemblPlants: Os07t0471000-01
- Gramene: Os07t0471000-01
- KEGG: dosa:Os07g0471000
- Orthologous matrix: MRPTAVY
- InterPro: IPR000719, IPR008271, IPR010513
- PANTHER: PTHR13954, PTHR13954:SF6
- SUPFAM: SSF56112
- PROSITE: PS00108, PS50011, PS51392
- Gene3D: 1.10.510.10, 1.20.1440.180, 3.30.200.20
- OrthoDB: Q7XIT1
- SWISS-MODEL: Q7XIT1
- Conserved Domain Database: cd10422
- eggNOG: KOG1027
Sequences
cDNA Sequence
- >LOC_Os07g28820.1
GGCTGTCACGCACGCACGCGTGGGCGCGTAGCAAAGCAAAGCAGCGAATCCGGCTTCACTAGTCTTCTTCCCCCCCGCCGCCGCATCGATCCCCCTTCCCCTCGTCTTCCTTCCCTTTCCCCCAATCAGATTGCTTCCAGAAGCCTCCTTCCCCGCGAAGCAACCAACCCCTTCCGGATCCCGACTCCATCCAAACCCCCATCCCCTCCCCTCTCCCCTACGCTCGAAACCCTAGGGAGATCCATCCACATGCCGCCCCGATGAGGTCGCTCCGCCGCGTCCTCCTCCAGCTCGTGCTCCTCGCCGGCGTCGCCTTCCGCGGGGTCCGCTTCGACGACGCCGCCGACGCCGCCGCCGCCGCCCAGGGGTCGTCAGACCTCTTCGAGCTCCCTTCGCCGTCCCCGACTCTCGCGCTCCCCGGCGGCGGGGATGAGGGGGCCTCGACGGAGATCATCGCCGCGCCGTGGCCGGGGCGCCACGGCCTGTTCACGCCGCCGCGGAGCACGTCCCAGCCGGCGAGAGCGGTGGTCCAGCCGGCCGCCGACTTCGGCTCCCAACTCCAGTTTTACGACAATGGTACAATTCAACTAGTGGACCTTCTATCAAAATTGCCTCGGTGGCAGTTCTCCACCGGACCCCCTCTTTCGAAGCATATCACTACTTCGAAACCTGATTTGAACTATGTCATATACCTTGATGGGTCAGAAACATCGGACCTTATAGAAGTTCATAATGGCAGTGGTGTGAGACTTCCCTGGAAACTGGAGGAGTTTATTGCTGAGACTCCATATATACGGGATTCTTTTGTTACGATTGGATCAAAGGTTTCAACTACTTTTGTGGTCAATGCTGATAGCGGTGAGATCATTTACAAGCATAGCTTGCCAGTGGCCTTGAACGAGGTAGGTGGCCCCCTGGTTGAGGAAATTCCATCCAAGTTAGATGCTGCTAGAAGTGGTACAAGTGCTAATATCATAGTGGTTGTGAGAACTGATTATTCTATCAGTGCATCGGATCTTGGGGAACATTTGTTCAACTGGACAAGAACTTCCTTCACTGCAAATTACTATGCGAGGTATGGCCACCAAGACATGCTTGCCCAATCGTCCTGTCTGCGAGGAAATATTCCATGCATTAGGACTGAGGGTCCACCAATTAAACTTTATTTACCTGATTCAAGTTCAGATAATGCAATTGTCTTGAGACCTGTGAACGAAGTTTCTGCTGTGGATGCTCTGGAACCACTTCTACCTCCAAAGAAGTTACCACAACCTGCTGGCGAGTCTAATGTGGCCTTGGATAGTGCTCAAAACCAGACTGCTGACATTGCCCTAGGTCATTTTGTGCCTGCTGACACTGAATTGACCAACAGTGTCACTAAATTTTCTTACAGATGGCTATTCCCCACGTTTCTCATGTTGTTGATCATGGCTTGTCTAGTGAAATTGGCCGATGCAAGCAAATATTGCAGGCAATTTGTGATTCGATTTTTGAAGCCATTTATGCGTGATGAGAAATTGATGGACCCAAGAGGCAAATCAGAGGGAACATCAAAAAGAAGGAAGGCGCGGAAGAAAGATGGACTTATCAATAGCACTCAGATCTTTTCAGCATCTGATAAAGAGGGGAATGGAACTGGTGGATCAACTGAGGCACAAAGTAATAAAGCACATGATTCAACAAATGTGGAACTCCCTAATGGCCTCAATGGGCGTCAGATTGGTAAGCTTTGTGTTTACAGTAAAGAAATTGGTAAAGGGAGCAATGGTACAGTTGTCTTTGAAGGCTCCTATGGTGGTCGGGAAGTTGCTGTGAAACGTCTGCTGCGCTCTCACAATGATATAGCCTCGAAAGAGATTGAGAATCTGATTGCATCTGATCAGGATCCTAATATTGTTCGAATGTATGGTTTTGAGCAGGACAATGATTTTGTTTATATCTCCCTTGAGAGGTGTCGCTGCAGCTTGGCTGATCTAATCCAACTGCACTCGGTACCACCATTTTCAAATACTAAGGGAACAGACATTGAACTTTGGAGGCAGGATGGACTTCCTTCGGCACAACTTCTAAAGCTGATGAGAGATGTTGTTGCTGGTATTGTGCATTTGCATAGTTTGGGAATTATACATCGTGATTTGAAGCCTCAGAATGTTTTGATAAGCAAGGAAGGACCTCTCAGAGCAAAACTTTCAGATATGGGTATCAGTAAGCGTTTGCAGGAGGATATGACTTCTGTTAGTCATCATGGCACTGGATTTGGAAGCTCTGGTTGGCAAGCACCTGAACAGCTTCGTCATGGTCGTCAGACTCGAGCCATAGATTTATTTAGTTTGGGCTGCCTTATATTCTATTGCATTACTAAAGGCAAGCATCCGTTTGGTGAGTACTATGAACGGGACATGAAAATCATAAACAATCAATTTGATCTCTTCATAGTGGATCACATACCAGAAGCAGTGCATCTTATTTCTCAACTGTTAGATCCAGATCCAGAGAAGAGACCAACGGCCGTGTATGTGATGCATCATCCTTTCTTTTGGAGCCCTGAGTTGTGCCTTTCATTTCTACGAGATACCAGTGACAGAATTGAGAAAACCAGTGAAACTGATCTCATAGATGCTTTGGAAGGCATAAATGTTGAAGCATTTGGTAAAAATTGGGGAGAGAAATTAGATGCTGCCCTGCTTGCAGACATGGGACGTTATAGAAAATATAGTTTTGAGTCCACTCGTGACCTTCTAAGATTGATCAGAAACAAATCAGGACATTACAGAGAATTTTCAGATGATCTCAAGGAGCTACTTGGGTCGCTGCCGGAGGGATTTGTTCAGTATTTCTCAAGCCGATTCCCAAAGCTGCTAATTAAAGTCTACGAGGTCATGTCCGAGCATTGCAAGGACGAAGAAGCTTTCAGCAAATATTTCCTTGGAAGCTCGGCGTAGCTGTAACCTGCAGGAGGGGTGAAGGCCCTGCCCTGCCTAGTGTGTACACTAACACTCTTCTAGCAAAAATGTATGTACATGTGATTTGTACCATATATCATAGGGTAAAGAAAGTTCAGCCTGTACATTGTATTCCACAGAATTGTGTATTACTTATAGTAAATCAAATCTTTTACCTGACTATATGGACTGCATTATCAAGGTTTTTTTTTTT
CDS Sequence
- >LOC_Os07g28820.1
ATGAGGTCGCTCCGCCGCGTCCTCCTCCAGCTCGTGCTCCTCGCCGGCGTCGCCTTCCGCGGGGTCCGCTTCGACGACGCCGCCGACGCCGCCGCCGCCGCCCAGGGGTCGTCAGACCTCTTCGAGCTCCCTTCGCCGTCCCCGACTCTCGCGCTCCCCGGCGGCGGGGATGAGGGGGCCTCGACGGAGATCATCGCCGCGCCGTGGCCGGGGCGCCACGGCCTGTTCACGCCGCCGCGGAGCACGTCCCAGCCGGCGAGAGCGGTGGTCCAGCCGGCCGCCGACTTCGGCTCCCAACTCCAGTTTTACGACAATGGTACAATTCAACTAGTGGACCTTCTATCAAAATTGCCTCGGTGGCAGTTCTCCACCGGACCCCCTCTTTCGAAGCATATCACTACTTCGAAACCTGATTTGAACTATGTCATATACCTTGATGGGTCAGAAACATCGGACCTTATAGAAGTTCATAATGGCAGTGGTGTGAGACTTCCCTGGAAACTGGAGGAGTTTATTGCTGAGACTCCATATATACGGGATTCTTTTGTTACGATTGGATCAAAGGTTTCAACTACTTTTGTGGTCAATGCTGATAGCGGTGAGATCATTTACAAGCATAGCTTGCCAGTGGCCTTGAACGAGGTAGGTGGCCCCCTGGTTGAGGAAATTCCATCCAAGTTAGATGCTGCTAGAAGTGGTACAAGTGCTAATATCATAGTGGTTGTGAGAACTGATTATTCTATCAGTGCATCGGATCTTGGGGAACATTTGTTCAACTGGACAAGAACTTCCTTCACTGCAAATTACTATGCGAGGTATGGCCACCAAGACATGCTTGCCCAATCGTCCTGTCTGCGAGGAAATATTCCATGCATTAGGACTGAGGGTCCACCAATTAAACTTTATTTACCTGATTCAAGTTCAGATAATGCAATTGTCTTGAGACCTGTGAACGAAGTTTCTGCTGTGGATGCTCTGGAACCACTTCTACCTCCAAAGAAGTTACCACAACCTGCTGGCGAGTCTAATGTGGCCTTGGATAGTGCTCAAAACCAGACTGCTGACATTGCCCTAGGTCATTTTGTGCCTGCTGACACTGAATTGACCAACAGTGTCACTAAATTTTCTTACAGATGGCTATTCCCCACGTTTCTCATGTTGTTGATCATGGCTTGTCTAGTGAAATTGGCCGATGCAAGCAAATATTGCAGGCAATTTGTGATTCGATTTTTGAAGCCATTTATGCGTGATGAGAAATTGATGGACCCAAGAGGCAAATCAGAGGGAACATCAAAAAGAAGGAAGGCGCGGAAGAAAGATGGACTTATCAATAGCACTCAGATCTTTTCAGCATCTGATAAAGAGGGGAATGGAACTGGTGGATCAACTGAGGCACAAAGTAATAAAGCACATGATTCAACAAATGTGGAACTCCCTAATGGCCTCAATGGGCGTCAGATTGGTAAGCTTTGTGTTTACAGTAAAGAAATTGGTAAAGGGAGCAATGGTACAGTTGTCTTTGAAGGCTCCTATGGTGGTCGGGAAGTTGCTGTGAAACGTCTGCTGCGCTCTCACAATGATATAGCCTCGAAAGAGATTGAGAATCTGATTGCATCTGATCAGGATCCTAATATTGTTCGAATGTATGGTTTTGAGCAGGACAATGATTTTGTTTATATCTCCCTTGAGAGGTGTCGCTGCAGCTTGGCTGATCTAATCCAACTGCACTCGGTACCACCATTTTCAAATACTAAGGGAACAGACATTGAACTTTGGAGGCAGGATGGACTTCCTTCGGCACAACTTCTAAAGCTGATGAGAGATGTTGTTGCTGGTATTGTGCATTTGCATAGTTTGGGAATTATACATCGTGATTTGAAGCCTCAGAATGTTTTGATAAGCAAGGAAGGACCTCTCAGAGCAAAACTTTCAGATATGGGTATCAGTAAGCGTTTGCAGGAGGATATGACTTCTGTTAGTCATCATGGCACTGGATTTGGAAGCTCTGGTTGGCAAGCACCTGAACAGCTTCGTCATGGTCGTCAGACTCGAGCCATAGATTTATTTAGTTTGGGCTGCCTTATATTCTATTGCATTACTAAAGGCAAGCATCCGTTTGGTGAGTACTATGAACGGGACATGAAAATCATAAACAATCAATTTGATCTCTTCATAGTGGATCACATACCAGAAGCAGTGCATCTTATTTCTCAACTGTTAGATCCAGATCCAGAGAAGAGACCAACGGCCGTGTATGTGATGCATCATCCTTTCTTTTGGAGCCCTGAGTTGTGCCTTTCATTTCTACGAGATACCAGTGACAGAATTGAGAAAACCAGTGAAACTGATCTCATAGATGCTTTGGAAGGCATAAATGTTGAAGCATTTGGTAAAAATTGGGGAGAGAAATTAGATGCTGCCCTGCTTGCAGACATGGGACGTTATAGAAAATATAGTTTTGAGTCCACTCGTGACCTTCTAAGATTGATCAGAAACAAATCAGGACATTACAGAGAATTTTCAGATGATCTCAAGGAGCTACTTGGGTCGCTGCCGGAGGGATTTGTTCAGTATTTCTCAAGCCGATTCCCAAAGCTGCTAATTAAAGTCTACGAGGTCATGTCCGAGCATTGCAAGGACGAAGAAGCTTTCAGCAAATATTTCCTTGGAAGCTCGGCGTAG
Protein Sequence
- >LOC_Os07g28820.1
MRSLRRVLLQLVLLAGVAFRGVRFDDAADAAAAAQGSSDLFELPSPSPTLALPGGGDEGASTEIIAAPWPGRHGLFTPPRSTSQPARAVVQPAADFGSQLQFYDNGTIQLVDLLSKLPRWQFSTGPPLSKHITTSKPDLNYVIYLDGSETSDLIEVHNGSGVRLPWKLEEFIAETPYIRDSFVTIGSKVSTTFVVNADSGEIIYKHSLPVALNEVGGPLVEEIPSKLDAARSGTSANIIVVVRTDYSISASDLGEHLFNWTRTSFTANYYARYGHQDMLAQSSCLRGNIPCIRTEGPPIKLYLPDSSSDNAIVLRPVNEVSAVDALEPLLPPKKLPQPAGESNVALDSAQNQTADIALGHFVPADTELTNSVTKFSYRWLFPTFLMLLIMACLVKLADASKYCRQFVIRFLKPFMRDEKLMDPRGKSEGTSKRRKARKKDGLINSTQIFSASDKEGNGTGGSTEAQSNKAHDSTNVELPNGLNGRQIGKLCVYSKEIGKGSNGTVVFEGSYGGREVAVKRLLRSHNDIASKEIENLIASDQDPNIVRMYGFEQDNDFVYISLERCRCSLADLIQLHSVPPFSNTKGTDIELWRQDGLPSAQLLKLMRDVVAGIVHLHSLGIIHRDLKPQNVLISKEGPLRAKLSDMGISKRLQEDMTSVSHHGTGFGSSGWQAPEQLRHGRQTRAIDLFSLGCLIFYCITKGKHPFGEYYERDMKIINNQFDLFIVDHIPEAVHLISQLLDPDPEKRPTAVYVMHHPFFWSPELCLSFLRDTSDRIEKTSETDLIDALEGINVEAFGKNWGEKLDAALLADMGRYRKYSFESTRDLLRLIRNKSGHYREFSDDLKELLGSLPEGFVQYFSSRFPKLLIKVYEVMSEHCKDEEAFSKYFLGSSA*