Information report for TIF1
Gene Details
|
|
Functional Descriptions
- Natural variation in Tiller Number 1 affects its interaction with TIF1 to regulate tillering in rice.
- Natural variation in TN1 affects its interaction with TIF1 (TN1 interaction factor 1) to affect DWARF14 expression and negatively regulate tiller number in rice.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q7EZ61
- EMBL: AP014963
- AlphaFoldDB: Q7EZ61
- EnsemblPlants: Os07t0256200-01
- Gramene: Os07t0256200-01
- KEGG: osa:4342857
- Orthologous matrix: GLCEEAN
- InterPro: IPR000504, IPR012677, IPR035979
- PANTHER: PTHR36309, PTHR36309:SF1
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: Q7EZ61
- SWISS-MODEL: Q7EZ61
- Conserved Domain Database: cd00590
- eggNOG: ENOG502QUFQ
Homologs
- Arabidopsis thaliana: AT1G05970
Sequences
cDNA Sequence
- >LOC_Os07g15270.1
GCTGTGAGGCCCGAGCCGCGTCGTCCTCCACTCCGGCGGCTGAGCGAGCGCCGCGCAGCGCCGCCGCATGAACGGGACGCCGCTTCGTTCCACGCCGCCGCGCCTTCCTCCCTCCTCCGGCGAAGAGGCCGCGGAGCGCCGCCGCCGACGCCGCCGATGATGATGCAACCATCACAGCGGCCGCGCACACGGGCACGGCGAGGGCAGCGCCGCCCTCGTCCTCCTCGTCCTCCTCCTCCTCCTCCGTTGGACTCCGGTGGATCGGCGTGGATCGGGACCTGCGTTGATTCCTCCTCTCGGTGGAGTATATTCTGTTCCAAAGAAATGTCTGCCTCCGAAAACCAGGCCGCTGAAGCTAGCAAGGGTGATGATGAGAAGATGGACCCTCCAAAGATGAAAATACGTATACGTCTACCACCCAGAAAGAGATTGTCTAATGGCCTGCTCAAGGCAGACATGGACGGACCTGATGATAGAAACAACGCCCAAAGTAGTGGAGTGCCTGTGCAAACTAAGAGCACAATACCAAGCAAGCAGTTGACAATCCCTGCAGCTCAGTGTTACGCAAGCAGCATCTCCACCAGTATACTGTGGAATGAGGGTAATAACAATGCCTCGAGCCAGACACTTCCCAATGAACCTAACTGTGACACTTCTAGCGACAAGCTACCTGAAGAAGCCAGTGACAGCATCCCAAGCAAGAAGCTGATAATCAAAGCAGCTCAGCATTACACAAGCAGCATCTCCACAGGAGGACTGTGCAATGAGGCTAATAACAATACCTCGAGCAAGACACTGACCAATGAATCTAATTGTGACACTTCTAGCGACAAGCTACCTGAAGAAACCATTGACAACATCTCAAGCAAGGTTCTGACAATCACTGCAGCTCAACATCAAATCGACAGCATCTCCACAGGAGAACTGTGCAATGAGGCTAATAACAATACCTCAAGGAAGATTCTGACAATCACTGCAGCTCAACATCAAATCGACAGCATCTCCACAGGAGAACTGTGCAATGAGGCTAATAACAATACCTCAAGCAAGATACTTCCCAATGAACCTAATTGTGACATTTCTAGTGACAAGCAACCTGAAGAAGCCAATGATACCATCCCAAGCAAGAACCTGATGATCACTGCTGGTGTGTGTATGGACGATGTTAGCAATTACTCTGCAAAAGAGGGTCTATGTGAGGATGCCAATGACACTATCCCAAGCACGAACCTGATGATCACTGCTGGAGTGTGGGGGCACGATGTTAGCAATTACTCTGCAAAAGAGGGTCTGTGTGAGGAGGCCAATGACATCATCCCAAGAAAGAACCTGACAATCGTTGATGGAGTGTGGGAGGACGATGTTAGTAATTATTCTACAAAAGAAGGCCTGTGTGAGGAGGCCAATGACACCATCCCAAGCAAGAACCTGATCATCACTGCTGGAGTGTGGGGGGACAATGTTAGCAATTACTCTGCAAAAGAGGGTTTGTGTGAGGAGACCAATGACATCATCCCAAGAAAGAACCTGACGATCACTGCTGGAGTGTGGGGAAACGATGTTAGCAATTACTCTGCGAAAGAAGGTCTGTGTGAGGAGGCCAATGGCAATATCCCAAGCAACGCACATCCTGCAACAATTAAGGAATTACCTGCAAAGCCTTTAGAGAGCACGCCAAGCAAGAACCTGACAACTATTGCAATGCTGGGTGAAGAGGAAAATAACAACCCCCTTAGGTTGTTTCATGAGACTGACATCAACATCCCCAGTAAGGTAGTATTACCTAAAAAATCTAAGAACAACCAAAGAAGGAACCTGGTAACCACTGCCGTCAAGTGTGAGGAGGCAAACAACGACCCCCTGAGCCGGAGGTTTTCTGAAGATGCTAATCGTAACATTCCTACCAGAAACCTGTCTGATAAGACTAAGAACAATGCCCAAAGCAATAGACCTACTAATCCAGATAGGAAGAACAACCCACAGAAGAAGCTTTCTACCACTGCAGTACATGCTGCTCCTGCCAGAAAGAACACCTCTGAAATCAAGATGGCTAACTCTGAAATGAAGCCTTCTACCTCTTTTGGCCAGGCTGCAGAACAAGGCATCAATCTGGCAAACTTGAAGGCCATAAAACAGTACCAAGAATTTGAGGAAAAGGTCAAAAGAACTGTATATCTTGATTACTTCTCGCACCAAGCTACAGAGTCAGTCATCAGAACTGCTCTGAATCAATTTGGGACTGTGAGAGAGATCAATTTTGTGGTGAACTACACCATTCCCTTTAGCATCCCACAGTCTGCATTGGTCATAATGGAGACTGAGAAGGATGCTGTGGCTGTGGTCAATATGCTCAATGAGTTCCCTTTTATGATGTCTGGAATGCCAAGGCCTGTGAGGGCAACTCGTGCTACAGCTGAGATGTTTAATGATCGCCCCCGGAGACCTGGGAACAAGTTAGAGTTTCGCTGGGTGGGCCCTTCAGATGCTGATTATCATATTGTCAAAAAGTTGAAGTTAATGTCGAGGAGACATGAGCTGGATAACTTGGCATTAGTCAAGCATGAGCTGGAAGAAGAGCATTTCCTTGCAAAACATCAGGAGGAGATTTTGAATTGCAATCAGAGGAAGCTTGAAGTTATGGACTCCATCATGTTGACCGGCAAGTTTACCCACTTGCAACACATTTATAGCGTCAAGGTGGATGAAGTGTTTTGTAACAAATGGCTCGTGTAATTAGCCCCGTTCTCCACACAGCACGGGTACCTTATTGGATTGGTTCAATGTTTGTGAACTGACGTCAAGGGTTTCGCAGAATTTGAAACGCTTCTGAAATTTGGACTTCAAAGTAGGAGAGCAAATCTGTCTTCAATTGCTTGTATTTGACATTGGACAATTAAAGAACTCTCTATGGATGGAAATTTATTTGTCCTTAGAAAGTTGATGCAGAAAGTAACGAAAGTAGCTGAACTTTGAGATTTGGTGACTATTCTTAACTTGAAATGAACTTGAAATCTGTACATTTTTATTCGCTATG
CDS Sequence
- >LOC_Os07g15270.1
ATGATGATGCAACCATCACAGCGGCCGCGCACACGGGCACGGCGAGGGCAGCGCCGCCCTCGTCCTCCTCGTCCTCCTCCTCCTCCTCCGTTGGACTCCGGTGGATCGGCGTGGATCGGGACCTGCGTTGATTCCTCCTCTCGGTGGAGTATATTCTGTTCCAAAGAAATGTCTGCCTCCGAAAACCAGGCCGCTGAAGCTAGCAAGGGTGATGATGAGAAGATGGACCCTCCAAAGATGAAAATACGTATACGTCTACCACCCAGAAAGAGATTGTCTAATGGCCTGCTCAAGGCAGACATGGACGGACCTGATGATAGAAACAACGCCCAAAGTAGTGGAGTGCCTGTGCAAACTAAGAGCACAATACCAAGCAAGCAGTTGACAATCCCTGCAGCTCAGTGTTACGCAAGCAGCATCTCCACCAGTATACTGTGGAATGAGGGTAATAACAATGCCTCGAGCCAGACACTTCCCAATGAACCTAACTGTGACACTTCTAGCGACAAGCTACCTGAAGAAGCCAGTGACAGCATCCCAAGCAAGAAGCTGATAATCAAAGCAGCTCAGCATTACACAAGCAGCATCTCCACAGGAGGACTGTGCAATGAGGCTAATAACAATACCTCGAGCAAGACACTGACCAATGAATCTAATTGTGACACTTCTAGCGACAAGCTACCTGAAGAAACCATTGACAACATCTCAAGCAAGGTTCTGACAATCACTGCAGCTCAACATCAAATCGACAGCATCTCCACAGGAGAACTGTGCAATGAGGCTAATAACAATACCTCAAGGAAGATTCTGACAATCACTGCAGCTCAACATCAAATCGACAGCATCTCCACAGGAGAACTGTGCAATGAGGCTAATAACAATACCTCAAGCAAGATACTTCCCAATGAACCTAATTGTGACATTTCTAGTGACAAGCAACCTGAAGAAGCCAATGATACCATCCCAAGCAAGAACCTGATGATCACTGCTGGTGTGTGTATGGACGATGTTAGCAATTACTCTGCAAAAGAGGGTCTATGTGAGGATGCCAATGACACTATCCCAAGCACGAACCTGATGATCACTGCTGGAGTGTGGGGGCACGATGTTAGCAATTACTCTGCAAAAGAGGGTCTGTGTGAGGAGGCCAATGACATCATCCCAAGAAAGAACCTGACAATCGTTGATGGAGTGTGGGAGGACGATGTTAGTAATTATTCTACAAAAGAAGGCCTGTGTGAGGAGGCCAATGACACCATCCCAAGCAAGAACCTGATCATCACTGCTGGAGTGTGGGGGGACAATGTTAGCAATTACTCTGCAAAAGAGGGTTTGTGTGAGGAGACCAATGACATCATCCCAAGAAAGAACCTGACGATCACTGCTGGAGTGTGGGGAAACGATGTTAGCAATTACTCTGCGAAAGAAGGTCTGTGTGAGGAGGCCAATGGCAATATCCCAAGCAACGCACATCCTGCAACAATTAAGGAATTACCTGCAAAGCCTTTAGAGAGCACGCCAAGCAAGAACCTGACAACTATTGCAATGCTGGGTGAAGAGGAAAATAACAACCCCCTTAGGTTGTTTCATGAGACTGACATCAACATCCCCAGTAAGGTAGTATTACCTAAAAAATCTAAGAACAACCAAAGAAGGAACCTGGTAACCACTGCCGTCAAGTGTGAGGAGGCAAACAACGACCCCCTGAGCCGGAGGTTTTCTGAAGATGCTAATCGTAACATTCCTACCAGAAACCTGTCTGATAAGACTAAGAACAATGCCCAAAGCAATAGACCTACTAATCCAGATAGGAAGAACAACCCACAGAAGAAGCTTTCTACCACTGCAGTACATGCTGCTCCTGCCAGAAAGAACACCTCTGAAATCAAGATGGCTAACTCTGAAATGAAGCCTTCTACCTCTTTTGGCCAGGCTGCAGAACAAGGCATCAATCTGGCAAACTTGAAGGCCATAAAACAGTACCAAGAATTTGAGGAAAAGGTCAAAAGAACTGTATATCTTGATTACTTCTCGCACCAAGCTACAGAGTCAGTCATCAGAACTGCTCTGAATCAATTTGGGACTGTGAGAGAGATCAATTTTGTGGTGAACTACACCATTCCCTTTAGCATCCCACAGTCTGCATTGGTCATAATGGAGACTGAGAAGGATGCTGTGGCTGTGGTCAATATGCTCAATGAGTTCCCTTTTATGATGTCTGGAATGCCAAGGCCTGTGAGGGCAACTCGTGCTACAGCTGAGATGTTTAATGATCGCCCCCGGAGACCTGGGAACAAGTTAGAGTTTCGCTGGGTGGGCCCTTCAGATGCTGATTATCATATTGTCAAAAAGTTGAAGTTAATGTCGAGGAGACATGAGCTGGATAACTTGGCATTAGTCAAGCATGAGCTGGAAGAAGAGCATTTCCTTGCAAAACATCAGGAGGAGATTTTGAATTGCAATCAGAGGAAGCTTGAAGTTATGGACTCCATCATGTTGACCGGCAAGTTTACCCACTTGCAACACATTTATAGCGTCAAGGTGGATGAAGTGTTTTGTAACAAATGGCTCGTGTAA
Protein Sequence
- >LOC_Os07g15270.1
MMMQPSQRPRTRARRGQRRPRPPRPPPPPPLDSGGSAWIGTCVDSSSRWSIFCSKEMSASENQAAEASKGDDEKMDPPKMKIRIRLPPRKRLSNGLLKADMDGPDDRNNAQSSGVPVQTKSTIPSKQLTIPAAQCYASSISTSILWNEGNNNASSQTLPNEPNCDTSSDKLPEEASDSIPSKKLIIKAAQHYTSSISTGGLCNEANNNTSSKTLTNESNCDTSSDKLPEETIDNISSKVLTITAAQHQIDSISTGELCNEANNNTSRKILTITAAQHQIDSISTGELCNEANNNTSSKILPNEPNCDISSDKQPEEANDTIPSKNLMITAGVCMDDVSNYSAKEGLCEDANDTIPSTNLMITAGVWGHDVSNYSAKEGLCEEANDIIPRKNLTIVDGVWEDDVSNYSTKEGLCEEANDTIPSKNLIITAGVWGDNVSNYSAKEGLCEETNDIIPRKNLTITAGVWGNDVSNYSAKEGLCEEANGNIPSNAHPATIKELPAKPLESTPSKNLTTIAMLGEEENNNPLRLFHETDINIPSKVVLPKKSKNNQRRNLVTTAVKCEEANNDPLSRRFSEDANRNIPTRNLSDKTKNNAQSNRPTNPDRKNNPQKKLSTTAVHAAPARKNTSEIKMANSEMKPSTSFGQAAEQGINLANLKAIKQYQEFEEKVKRTVYLDYFSHQATESVIRTALNQFGTVREINFVVNYTIPFSIPQSALVIMETEKDAVAVVNMLNEFPFMMSGMPRPVRATRATAEMFNDRPRRPGNKLEFRWVGPSDADYHIVKKLKLMSRRHELDNLALVKHELEEEHFLAKHQEEILNCNQRKLEVMDSIMLTGKFTHLQHIYSVKVDEVFCNKWLV*