Gene Details:
- MSU gene ID: LOC_Os07g12110
- RAPdb gene ID: Os07g0222300
- Gene Symbol: OseIF3e EIF3E
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Furthermore, the pollen that developed was completely sterile, which was correlated with the altered expression of two Rf (fertility restorer)-like genes that encode pentatricopeptide repeat-containing proteins OsPPR676 and OsPPR920, translational initiation factors OseIF3e and OseIF3h, and the heat shock protein OsHSP82.
- These results suggested although OseIF3e is not a "functional core" subunit of eIF3, it still plays crucial roles in rice growth and development, in combination with other factors.
- Repression of OseIF3e led to defects in pollen maturation but did not affect pollen mitosis.
- We proposed a pathway by which OseIF3e influence organ size and pollen maturation in rice, providing an opportunity to optimize plant architecture for crop breeding.
Function-related keywords:
- fertility , pollen , sterile , growth , architecture , breeding , mitosis , organ-size , plant-architecture
Literature:
- Inhibition of a basal transcription factor 3-like gene Osj10gBTF3 in rice results in significant plant miniaturization and typical pollen abortion . DOI: 10.1093/pcp/pcs146 ; PMID: 23147221
- The Rice Eukaryotic Translation Initiation Factor 3 Subunit e (OseIF3e) Influences Organ Size and Pollen Maturation . DOI: 10.3389/fpls.2016.01399 ; PMID: 27703462
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g12110.1
AAGCCCACCTCATTCCATTCCATTCCTCTCTACCTTCTCCCTCTCCCTCCTCCTCCTCCTCCTCCCGCCGCCGCCGCACGCGGAACCCTAGAAAACCCTAGCAGCGGCGAGCACCGGGGAGCGGGCGGCCATGGCGGAGCACGACCTGACGGCGCGGATGGCGGGGCAGATGGACTGCCACCTGGTGTTCCCGCTGCTGGAGTTCCTGCAGGAGCGTGCGCTGTACGCGAACAAGGAGATCCTGGAGGCGAAGCTCCGCCTCCTCAGCGGGACCAACATGGTGGACTACGCCATGGACATCCACAAGTCCCTCCACGACACCGACGAGGTCCCCGACGACATGGTCAGGCGCCGCACCGACGTCGTCTCCAGGCTCAGGGCGCTCGACGAGGCCACCGCCCCCATCGTCTCCTTCCTCCAGAACCAGCAGCTCGTCCAGGAGCTCAGGCCAGACAAGCAGTACAACCTCCACATGCTCCAGGACCGCTTCCAGATTGGTCCTGAGCAGATTGAGACTCTGTATCAGTTTGCCAAGTTTCAGTTTGACTGCGGTAATTACTCAGATGCTGCTGTCTACTTGTATCAATACCGTGCTTTGTGCACGAACAGCGAGAGGAGCTTGAGTGCCCTGTGGGGAAAGCTGGCAGCCGAGATTTTGATGCAGAACTGGGATGTTGCACTGGATGAGCTCAACCGTTTGAAGGAGATTATTGATTCAAAGAACTTCTCATCACCACTAAATCAGCTCCAGAATAGGATATGGCTGATGCATTGGAGTATTTTTATCTTCTTTAACCATGAAAACGGCAGAAATGGGATCATCGATCTGTTCTTCCAGGATAGGTACTTGAACGCAATCCAGACAAATGCACCCCATCTTCTGAGATACCTTGCTACAGCAGTTGTCGTGAACAAAAGGAGAAGGAACATGCTTAAAGAGTTGATTAAAGTCATTCAGCAGGAGCAGCACAGCTACAAGGATCCCATCACTGAATTCTTGGAATGCTTGTATGTTAACTATGATTTTGATGGTGCACAACAGAAACTCATAGAGTGTGAGCAGGTCATATTGAATGATCCTTTCCTTGGAAAGCGCATTGAGGAAGGGAATTTTGTCACTGTTCCTTTGAGAGATGAATTCCTTGAAAATGCTCGTCTGTTTATCTTTGAAACTTACTGCCGTATTCATCGGTGCATTGATATTGGCATGCTTTCTCAGAAGCTGAACATGAGCTACGATGAGGCAGAATTGTGGATTATGAACTTAGTTAGGAATTCAAAGCTCGACGCCAAGATTGATTCAGTGTCTGGAACTCTTATCATGACGACCAATCATGTTAACATCCATGAGCAGGTTATCGAAAGCTTAAAGAATCTTAACATGCGGACTTTCCTGCTAGCAAAGAACATTGTGGAGCCGGCTCAAGCAGCACAACAGGCAGCTCGGTGAGATTGACAGAGAAGACCACAGTTTTGAGGCGCCCGGAATTATTTAAGTAGAGACAATCCTCTAAACTTTTGGAGTTTTGTTGTTTAGCATTGACTCCGTTATCAGTACCTAAGATCATCTAGGAGGTGGTTTCTCGTTCGCTACAGCATATGCCGACGTTTTCTTTCTATTTTGTACTTGGAATCCTGTGGCTGAAGTTAATCCTTTCGTTGGTACTACAATCAAGTATTACCTGATTGTTATGGTGTTTCGTGTTGAAGTGAAGTGCGGAAGTGTGGTCATTTTTATAATTGTAGGTTCAATGTTTTTCTTGGTTCTGCTAAATTTGTGGCGCCACATTTTACCTTGATTTCAGTCAATTATTTGACCACACGATTGACGCTGAGA
CDS Sequence
- >LOC_Os07g12110.1
ATGGCGGAGCACGACCTGACGGCGCGGATGGCGGGGCAGATGGACTGCCACCTGGTGTTCCCGCTGCTGGAGTTCCTGCAGGAGCGTGCGCTGTACGCGAACAAGGAGATCCTGGAGGCGAAGCTCCGCCTCCTCAGCGGGACCAACATGGTGGACTACGCCATGGACATCCACAAGTCCCTCCACGACACCGACGAGGTCCCCGACGACATGGTCAGGCGCCGCACCGACGTCGTCTCCAGGCTCAGGGCGCTCGACGAGGCCACCGCCCCCATCGTCTCCTTCCTCCAGAACCAGCAGCTCGTCCAGGAGCTCAGGCCAGACAAGCAGTACAACCTCCACATGCTCCAGGACCGCTTCCAGATTGGTCCTGAGCAGATTGAGACTCTGTATCAGTTTGCCAAGTTTCAGTTTGACTGCGGTAATTACTCAGATGCTGCTGTCTACTTGTATCAATACCGTGCTTTGTGCACGAACAGCGAGAGGAGCTTGAGTGCCCTGTGGGGAAAGCTGGCAGCCGAGATTTTGATGCAGAACTGGGATGTTGCACTGGATGAGCTCAACCGTTTGAAGGAGATTATTGATTCAAAGAACTTCTCATCACCACTAAATCAGCTCCAGAATAGGATATGGCTGATGCATTGGAGTATTTTTATCTTCTTTAACCATGAAAACGGCAGAAATGGGATCATCGATCTGTTCTTCCAGGATAGGTACTTGAACGCAATCCAGACAAATGCACCCCATCTTCTGAGATACCTTGCTACAGCAGTTGTCGTGAACAAAAGGAGAAGGAACATGCTTAAAGAGTTGATTAAAGTCATTCAGCAGGAGCAGCACAGCTACAAGGATCCCATCACTGAATTCTTGGAATGCTTGTATGTTAACTATGATTTTGATGGTGCACAACAGAAACTCATAGAGTGTGAGCAGGTCATATTGAATGATCCTTTCCTTGGAAAGCGCATTGAGGAAGGGAATTTTGTCACTGTTCCTTTGAGAGATGAATTCCTTGAAAATGCTCGTCTGTTTATCTTTGAAACTTACTGCCGTATTCATCGGTGCATTGATATTGGCATGCTTTCTCAGAAGCTGAACATGAGCTACGATGAGGCAGAATTGTGGATTATGAACTTAGTTAGGAATTCAAAGCTCGACGCCAAGATTGATTCAGTGTCTGGAACTCTTATCATGACGACCAATCATGTTAACATCCATGAGCAGGTTATCGAAAGCTTAAAGAATCTTAACATGCGGACTTTCCTGCTAGCAAAGAACATTGTGGAGCCGGCTCAAGCAGCACAACAGGCAGCTCGGTGA
Protein Sequence
- >LOC_Os07g12110.1
MAEHDLTARMAGQMDCHLVFPLLEFLQERALYANKEILEAKLRLLSGTNMVDYAMDIHKSLHDTDEVPDDMVRRRTDVVSRLRALDEATAPIVSFLQNQQLVQELRPDKQYNLHMLQDRFQIGPEQIETLYQFAKFQFDCGNYSDAAVYLYQYRALCTNSERSLSALWGKLAAEILMQNWDVALDELNRLKEIIDSKNFSSPLNQLQNRIWLMHWSIFIFFNHENGRNGIIDLFFQDRYLNAIQTNAPHLLRYLATAVVVNKRRRNMLKELIKVIQQEQHSYKDPITEFLECLYVNYDFDGAQQKLIECEQVILNDPFLGKRIEEGNFVTVPLRDEFLENARLFIFETYCRIHRCIDIGMLSQKLNMSYDEAELWIMNLVRNSKLDAKIDSVSGTLIMTTNHVNIHEQVIESLKNLNMRTFLLAKNIVEPAQAAQQAAR*