Gene Details:

Functional Descriptions:

  • ) spotted leaf 5 (spl5) indicates that wild-type spl5 negatively regulates cell death and resistance responses.
  • Bioinformatic analysis showed that SPL5 gene encodes a putative splicing factor 3b subunit 3 (SF3b3) and might be involved in splicing reactions of pre-mature RNAs participating in the regulation of cell death and resistance responses.
  • The data presented here clearly indicate that the spl5 negatively regulates cell death and resistance responses via modulating RNA splicing in plants.
  • SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice.
  • Rice mutant, spl5 (spotted leaf 5), has spontaneous hypersensitive-like lesions on its leaves and shows enhanced resistance to pathogens, indicating that spl5 plays a role in programmed cell death (PCD) and disease resistance.
  • Since the serotonin plays a critical role in inducing disease-resistance, the increased serotonin level may contribute, at least partly, to the disease resistance in spl5.
  • The spl5 gene may act as a negative regulatory factor activating the serotonin metabolic pathway, and these results might provide a new insight into the spl5-induced defense response mechanisms in plants.
  • Interestingly, according to our microarray and real-time PCR assays, the expressions of a transcription factor OsWRKY14 and genes responsible for the biosynthesis of serotonin, anthranilate synthase (AS), indole-3-glycerolphosphate synthase (IGPS), tryptophan synthase (TS) and tryptophan decarboxylase (TDC) were significantly up-regulated in the spl5 mutant.
  • Transcriptome profiling of the spl5 mutant reveals that spl5 has a negative role in the biosynthesis of serotonin for rice disease resistance.
  • A 1.84-Mb region on rice chromosome 2 carrying SPL4, spl5 and MLO8 genes is associated with higher yield under phosphorus-deficient acidic soil.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os07g10390.1
    CAAAGCTGTAGTGAAATCAAGGATTGTTTGCTCATGGAACTGGGAGCCAAATGCCATGCAAGGACATCCAAGGCTGATCTTTTGCTTGGATGATGGAGAATTTCATCTTCTAGAGTTTAGTTTGGATATGGAAGGAGTGAAGGTATTGCCTGAGTGTGTCCATAGAGGTTTGCCTTGCAAACCTCTTTTGTGGATGGACAAAGGAATGGTAGTTGGATTTGTAGAGATGGGAGATGGGATGATCCTCCAACTTGAAAATAATAGATTGGTGCATAAAAGTGCAATTCAGAATGTAGCGCCAATATTGGATCTAGCAATTGCTGACCACCATGGTGAGAAGCAGGATCAGATGTTTGCATGTTGTGGAATGTGCCCTGAGGGGTCCTTGCGAGTAATACGTAATGGTGTCAATGTGGAGAAACTTCTGAGGACAGATCCTATTTATCATGGTGTTACTGGTTTGTGGACCTTGAGAATGAAGAGAACTGATGCTTATCACTCTTTTCTTGTATTGTCATTCGTTGAGGAAACCAGAATACTATCAGTAGGACTCAGTTTTAATGACATCTGTGATGCTGTAGGATTTCAGACTGATGTTTGCACTCTGGCATGTGGTTTAGTAGCTGATGGTTTGCTTGTGCAAATTCACAGCAAATGTGTAAAGCTTTGTTTACCTACAGCATGTGCTCACCCTGAGGGAACTTTGCTCCCGTCTCCTGTTTGTGCTGACTGGTATCCTGATGTCACTATCAGTGTTGGTGCTGTTGGACATAATGTTGTTGTTGTTGCTACATCGAATCCTTGTTGCCTTTACATACTTGGGGTCAGATCATTATCTTCGTTTCAGTATGAGCTGTATGAGATACAACATGTCCAGTTGCATTATGAAGTATCTTGCATATCTATTCCACAAGAGGACTGGAGACTTGATAATTCATCTTCTAGTTGTGCAACGAGTGGTGATTTTCGGAAAGATTTTGCAGCTAATATTCGCAAGTTTGCTGTAATTGGAACTCACGAACCTTCTGTGCATATCATTTCGTTGGAACCTGGAGAAGCATTTCAGCAACTTGCTGTTGGGCATATATCAGTAAACAACGCGCTCGGCACTCCTATCAGTGGTTGTATACCTGAAAATGTTAGGTTTGTAGCAGCTGCAAGGTTCTACATTCTTGCAGGACTAAGGAATGGAATGCTACTGAGGTTTGAGTCACAAACAAGCAAAGGGCATTGTTTCCCTGGTTCCTTTTACAAGGAGTCCTCTACCCCTTGTGATGATACATCCCTTATGTTGATTGCTGTACGGCGTATTGGAATCACTCCTGTAGTTTTGGTACCGTTGCATGACAGAGCCAATGCTGACATTATTGTTCTCGGTGATAGGCCTTGGCTATTGCAATCTGCTAGACACAGCTTGGCATATTCATCCATCTCATTTCTGCCTGCTTCCCATGTGACACCAGTGTCTTCTACTGATTGCCCCAGTGGTCTGCTGTTTGTTTCGGAGAACTGTTTGCATTTGGTTGAAATGGTTCATGGCAAAAGACTAAATGCACAGAAGTTTTCGATTGGAGGGACTCCAAGGAAAGTGTTATACCACAGTGATAGTAGAACACTGTTGGTGCTGAGAACTGGGTTAACCAGTGTATCCTGTTCTTCAGATATTGTTCAAATAGATCCAAGTAATGGGGCATTGCTTTCCAGATTCAAGTGCGAACCTGGTGAAACAGCAAAATGCATGCAAATTGCAAAGATAGGGAATGATCAAGTATTAATCGTTGGAACTAGTAAGTCCAATGGCCGACCAATGATGCCAAACGGTGAAGCAGAAAGTATCAAGGGTCGTCTAATTCTTTTAAGCTTGGAGACTATTGAAAGTCCTCGTGAGAGCGGTTCGTTTACTGCAGCTTCTAATTTGAATTCATCTCATGCTGGTTCTCCATTCCCGGAATTTGTTGGATATGCAGCAGAGGAGCTGTCTAGTAACAGCATGTGCAGCAGTCCTGATGAAGTTTGCTGCAATCAAATTCAACCTGAACTCATGGCAGGCCATTTGAGATCACTAGTCCAACATACATTCAATGGCGCTGTTCTTGCTGTACATCCATATCTAGATAGATATGTGTTGGCAGCAGCTGGAAATGTGCTTTTTGTATTTGGATTTTTAAATGAAAGTCCCCATCGGATAAAAAAGTATACTACGAGTAGGACACGATTTACAATAACCTGTTTGAAGACGTATGCATCACGGATTGCAGTGGGTGATTGCCGCGATGGTGTTCTCTTCTATTCTTATCATGAGAATCTTAGGAAGTTGGAACTGATCTATTCTGATCCTGCCCAACGGCTAGTGGGTGATGTTGCCCTTTTGAGCTGTGAAACTGCTGTTGTATCAGATCGACGAGGGAGCATATCTGTACTGTCTTGCCCAAGATTAGAAGTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTACATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGATGATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGACATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGCAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTTTGCCCAGTGAAAGGAACAACCCTCGTGAACGCATAATCTCCATTGTGGTATATGTCAACTTGCTTCAGGTTATGCCAGTTGAAATAGGGATCTGGAAACATTTCCTGAAATCTGACGCTTGCTTGATCTTTGTGCCTTAATAAATTTGCTCTCTCCAACCATAGATTTATTTTCTTC
CDS Sequence
  • >LOC_Os07g10390.1
    ATGCAAGGACATCCAAGGCTGATCTTTTGCTTGGATGATGGAGAATTTCATCTTCTAGAGTTTAGTTTGGATATGGAAGGAGTGAAGGTATTGCCTGAGTGTGTCCATAGAGGTTTGCCTTGCAAACCTCTTTTGTGGATGGACAAAGGAATGGTAGTTGGATTTGTAGAGATGGGAGATGGGATGATCCTCCAACTTGAAAATAATAGATTGGTGCATAAAAGTGCAATTCAGAATGTAGCGCCAATATTGGATCTAGCAATTGCTGACCACCATGGTGAGAAGCAGGATCAGATGTTTGCATGTTGTGGAATGTGCCCTGAGGGGTCCTTGCGAGTAATACGTAATGGTGTCAATGTGGAGAAACTTCTGAGGACAGATCCTATTTATCATGGTGTTACTGGTTTGTGGACCTTGAGAATGAAGAGAACTGATGCTTATCACTCTTTTCTTGTATTGTCATTCGTTGAGGAAACCAGAATACTATCAGTAGGACTCAGTTTTAATGACATCTGTGATGCTGTAGGATTTCAGACTGATGTTTGCACTCTGGCATGTGGTTTAGTAGCTGATGGTTTGCTTGTGCAAATTCACAGCAAATGTGTAAAGCTTTGTTTACCTACAGCATGTGCTCACCCTGAGGGAACTTTGCTCCCGTCTCCTGTTTGTGCTGACTGGTATCCTGATGTCACTATCAGTGTTGGTGCTGTTGGACATAATGTTGTTGTTGTTGCTACATCGAATCCTTGTTGCCTTTACATACTTGGGGTCAGATCATTATCTTCGTTTCAGTATGAGCTGTATGAGATACAACATGTCCAGTTGCATTATGAAGTATCTTGCATATCTATTCCACAAGAGGACTGGAGACTTGATAATTCATCTTCTAGTTGTGCAACGAGTGGTGATTTTCGGAAAGATTTTGCAGCTAATATTCGCAAGTTTGCTGTAATTGGAACTCACGAACCTTCTGTGCATATCATTTCGTTGGAACCTGGAGAAGCATTTCAGCAACTTGCTGTTGGGCATATATCAGTAAACAACGCGCTCGGCACTCCTATCAGTGGTTGTATACCTGAAAATGTTAGGTTTGTAGCAGCTGCAAGGTTCTACATTCTTGCAGGACTAAGGAATGGAATGCTACTGAGGTTTGAGTCACAAACAAGCAAAGGGCATTGTTTCCCTGGTTCCTTTTACAAGGAGTCCTCTACCCCTTGTGATGATACATCCCTTATGTTGATTGCTGTACGGCGTATTGGAATCACTCCTGTAGTTTTGGTACCGTTGCATGACAGAGCCAATGCTGACATTATTGTTCTCGGTGATAGGCCTTGGCTATTGCAATCTGCTAGACACAGCTTGGCATATTCATCCATCTCATTTCTGCCTGCTTCCCATGTGACACCAGTGTCTTCTACTGATTGCCCCAGTGGTCTGCTGTTTGTTTCGGAGAACTGTTTGCATTTGGTTGAAATGGTTCATGGCAAAAGACTAAATGCACAGAAGTTTTCGATTGGAGGGACTCCAAGGAAAGTGTTATACCACAGTGATAGTAGAACACTGTTGGTGCTGAGAACTGGGTTAACCAGTGTATCCTGTTCTTCAGATATTGTTCAAATAGATCCAAGTAATGGGGCATTGCTTTCCAGATTCAAGTGCGAACCTGGTGAAACAGCAAAATGCATGCAAATTGCAAAGATAGGGAATGATCAAGTATTAATCGTTGGAACTAGTAAGTCCAATGGCCGACCAATGATGCCAAACGGTGAAGCAGAAAGTATCAAGGGTCGTCTAATTCTTTTAAGCTTGGAGACTATTGAAAGTCCTCGTGAGAGCGGTTCGTTTACTGCAGCTTCTAATTTGAATTCATCTCATGCTGGTTCTCCATTCCCGGAATTTGTTGGATATGCAGCAGAGGAGCTGTCTAGTAACAGCATGTGCAGCAGTCCTGATGAAGTTTGCTGCAATCAAATTCAACCTGAACTCATGGCAGGCCATTTGAGATCACTAGTCCAACATACATTCAATGGCGCTGTTCTTGCTGTACATCCATATCTAGATAGATATGTGTTGGCAGCAGCTGGAAATGTGCTTTTTGTATTTGGATTTTTAAATGAAAGTCCCCATCGGATAAAAAAGTATACTACGAGTAGGACACGATTTACAATAACCTGTTTGAAGACGTATGCATCACGGATTGCAGTGGGTGATTGCCGCGATGGTGTTCTCTTCTATTCTTATCATGAGAATCTTAGGAAGTTGGAACTGATCTATTCTGATCCTGCCCAACGGCTAGTGGGTGATGTTGCCCTTTTGAGCTGTGAAACTGCTGTTGTATCAGATCGACGAGGGAGCATATCTGTACTGTCTTGCCCAAGATTAGAAGTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTACATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGATGATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGA
Protein Sequence
  • >LOC_Os07g10390.1
    MQGHPRLIFCLDDGEFHLLEFSLDMEGVKVLPECVHRGLPCKPLLWMDKGMVVGFVEMGDGMILQLENNRLVHKSAIQNVAPILDLAIADHHGEKQDQMFACCGMCPEGSLRVIRNGVNVEKLLRTDPIYHGVTGLWTLRMKRTDAYHSFLVLSFVEETRILSVGLSFNDICDAVGFQTDVCTLACGLVADGLLVQIHSKCVKLCLPTACAHPEGTLLPSPVCADWYPDVTISVGAVGHNVVVVATSNPCCLYILGVRSLSSFQYELYEIQHVQLHYEVSCISIPQEDWRLDNSSSSCATSGDFRKDFAANIRKFAVIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPENVRFVAAARFYILAGLRNGMLLRFESQTSKGHCFPGSFYKESSTPCDDTSLMLIAVRRIGITPVVLVPLHDRANADIIVLGDRPWLLQSARHSLAYSSISFLPASHVTPVSSTDCPSGLLFVSENCLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSDIVQIDPSNGALLSRFKCEPGETAKCMQIAKIGNDQVLIVGTSKSNGRPMMPNGEAESIKGRLILLSLETIESPRESGSFTAASNLNSSHAGSPFPEFVGYAAEELSSNSMCSSPDEVCCNQIQPELMAGHLRSLVQHTFNGAVLAVHPYLDRYVLAAAGNVLFVFGFLNESPHRIKKYTTSRTRFTITCLKTYASRIAVGDCRDGVLFYSYHENLRKLELIYSDPAQRLVGDVALLSCETAVVSDRRGSISVLSCPRLEVSESPEKNLAVHCSFYMGETAMSIQKVAFKHWLPIDDLTEPVLESVYNCVVASTLLGSIFVMIPLTSEEHQMLQDVQERLSVHPLTAPLLGNDHAEFRRRGIPSGVPPILDGDMLVQFLELTSEQQHDVLNIVSPGKKRQHDISVFQVMRALERVHYALN*