Gene Details:
- MSU gene ID: LOC_Os07g06940
- RAPdb gene ID: Os07g0163500
- Gene Symbol: WP1 OsValRS2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Chlorophyll autofluorescence observations and transmission electron microscopy analyses indicated that WP1 mutants are defective in early chloroplast development.
- Western blot analyses of chloroplast-encoded proteins showed that WP1 mutants were defective in chloroplast protein synthesis, although transcription of some genes was higher in WP1 than in wild type.
- We found that WP1 was impaired in chloroplast ribosome biogenesis.
Function-related keywords:
Literature:
- WHITE PANICLE1, a Val-tRNA Synthetase Regulating Chloroplast Ribosome Biogenesis in Rice, Is Essential for Early Chloroplast Development . DOI: 10.1104/pp.15.01949 ; PMID: 26839129
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g06940.1
TAGTAGGCAACTGTGGTGGGGTCATCGGATCCCTGTTTGGTACATCGTTGGAAAGAAATGTGAGGAAGACTATATTGTTGCTAGAAGTGCAGAGGAGGCACTTGCAAAGGCTCAGGAAAAATATGGAAAATCAGTTGAAATATATCAAGATCCTGATGTTCTTGACACTTGGTTCTCAAGTGCTCTGTGGCCTTTCAGTACACTTGGTTGGCCAGACCTATCCAGTGAGGATTTTAAGCACTTTTATCCTGCAACTGTTCTTGAGACTGGCCATGACATTTTGTTCTTCTGGGTTGCACGAATGGTCATGATGGGAATTGAGTTTACAGGAACTGTGCCATTTTCTTATGTTTATCTTCATGGTCTCATCCGGGACTCTGAGGGACGAAAAATGTCTAAGACACTGGGGAATGTCATTGACCCTCTAGATACCATCAAAGAGTACGGGACAGATGCATTGAGATTTACACTTTCCATGGGTACCGCAGGCCAGGACCTTAATCTCTCTACAGAAAGATTGACATCAAACAAGGCTTTCACCAACAAACTCTGGAATGCAGGCAAATTTTTGTTGCAGAATTTGCCTGATAGAAGTGATGCCACTGCATGGGATGTCTTGTTAGCAAATAAGTTTGATACAGAAGCGTCACTTCAGAAACTACCACTGCCAGAATCCTGGGTGGTGACAGGATTACACGAACTCATCGATAGGGTCAGCACAAGCTACGACAAATTTTTCTTTGGCGATGCAGCTAGAGAAATCTACGATTTCTTTTGGGGGGACTTTGCTGATTGGTATATTGAAGCCAGCAAGACACGTCTTTACCACTCTGGTGATGATTCAGCTTCTTCTATGGCACAAAGTGTTCTGTTGTATGTGTTTGAAAACATACTGAAGCTATTGCACCCCTTCATGCCCTTTGTCACTGAAGAGTTATGGCAGGCATTGCCATACAGAAAACAAGCAATTATTGTTGCCCACTGGCCTGCGACTGATCTCCCTAAGAATTCTCTCTCGATCAAGAGATTTCAGAATTTGCAATCGTTGATAAGAGGTATCAGAAATGTTCGAGCAGAGTATTCTGTTGAGCCAGCCAAGCGAATATCTTCATCAGTTGTTGCTGCCGCAGATGTCCTAGATTACATATCGAAGGAGAAGCAGGTCCTGGCTTTACTTTCAAAGCTTGACATGCAGAGTATACATTTTAGCGAGTTGCCGCCAGGTGATGCAAATCAGTCGGTCCACATTGTTGCTGATGAGGGTCTGGAGGCCTATCTACCCCTGGCTGACATGGTGGATGTTTCTGAGGAAGTTAAGCGGCTGTCAAAGCGCCTCTCTAAGATGCAGTCGGAATATGATTCTTTGCTGGCCCGTCTCAATTCAGGAAGTTTTGTAGAGAAGGCCCCAGAAGAAATTGTTCGTGGAGTTCGTGAGAAAGCATCAGAAGCAGAAGAGAAGATCTCCCTCACCAAGAATCGGCTCGCTTTCCTGCAGTCAACAGTATCAAGTTAGATTCAGCAGTCACCATTGACGGTGTCAACCTGCCATCTAAATAACAATTTTGATTAGTCCTGATTTGGACGAGAGATGCCACTTCCGGATATAAATTGGCGTGTCAGAGTAGTGAGTGCCATTCCATTTTCGCGTGTGCAGGACATTGCAACTGGTGCACGCATCTTACCGATAAGTTCTACTATATAACACTCATTTATACGTCTACTAGGTATGCCTGTACGCCTGTGCGTTGTAACGGGACAATAGTTGTACATACATAAACAATACATAAACAATGAATGGAATAAACAGTTGCACACA
CDS Sequence
- >LOC_Os07g06940.1
ATGGTCATGATGGGAATTGAGTTTACAGGAACTGTGCCATTTTCTTATGTTTATCTTCATGGTCTCATCCGGGACTCTGAGGGACGAAAAATGTCTAAGACACTGGGGAATGTCATTGACCCTCTAGATACCATCAAAGAGTACGGGACAGATGCATTGAGATTTACACTTTCCATGGGTACCGCAGGCCAGGACCTTAATCTCTCTACAGAAAGATTGACATCAAACAAGGCTTTCACCAACAAACTCTGGAATGCAGGCAAATTTTTGTTGCAGAATTTGCCTGATAGAAGTGATGCCACTGCATGGGATGTCTTGTTAGCAAATAAGTTTGATACAGAAGCGTCACTTCAGAAACTACCACTGCCAGAATCCTGGGTGGTGACAGGATTACACGAACTCATCGATAGGGTCAGCACAAGCTACGACAAATTTTTCTTTGGCGATGCAGCTAGAGAAATCTACGATTTCTTTTGGGGGGACTTTGCTGATTGGTATATTGAAGCCAGCAAGACACGTCTTTACCACTCTGGTGATGATTCAGCTTCTTCTATGGCACAAAGTGTTCTGTTGTATGTGTTTGAAAACATACTGAAGCTATTGCACCCCTTCATGCCCTTTGTCACTGAAGAGTTATGGCAGGCATTGCCATACAGAAAACAAGCAATTATTGTTGCCCACTGGCCTGCGACTGATCTCCCTAAGAATTCTCTCTCGATCAAGAGATTTCAGAATTTGCAATCGTTGATAAGAGGTATCAGAAATGTTCGAGCAGAGTATTCTGTTGAGCCAGCCAAGCGAATATCTTCATCAGTTGTTGCTGCCGCAGATGTCCTAGATTACATATCGAAGGAGAAGCAGGTCCTGGCTTTACTTTCAAAGCTTGACATGCAGAGTATACATTTTAGCGAGTTGCCGCCAGGTGATGCAAATCAGTCGGTCCACATTGTTGCTGATGAGGGTCTGGAGGCCTATCTACCCCTGGCTGACATGGTGGATGTTTCTGAGGAAGTTAAGCGGCTGTCAAAGCGCCTCTCTAAGATGCAGTCGGAATATGATTCTTTGCTGGCCCGTCTCAATTCAGGAAGTTTTGTAGAGAAGGCCCCAGAAGAAATTGTTCGTGGAGTTCGTGAGAAAGCATCAGAAGCAGAAGAGAAGATCTCCCTCACCAAGAATCGGCTCGCTTTCCTGCAGTCAACAGTATCAAGTTAG
Protein Sequence
- >LOC_Os07g06940.1
MVMMGIEFTGTVPFSYVYLHGLIRDSEGRKMSKTLGNVIDPLDTIKEYGTDALRFTLSMGTAGQDLNLSTERLTSNKAFTNKLWNAGKFLLQNLPDRSDATAWDVLLANKFDTEASLQKLPLPESWVVTGLHELIDRVSTSYDKFFFGDAAREIYDFFWGDFADWYIEASKTRLYHSGDDSASSMAQSVLLYVFENILKLLHPFMPFVTEELWQALPYRKQAIIVAHWPATDLPKNSLSIKRFQNLQSLIRGIRNVRAEYSVEPAKRISSSVVAAADVLDYISKEKQVLALLSKLDMQSIHFSELPPGDANQSVHIVADEGLEAYLPLADMVDVSEEVKRLSKRLSKMQSEYDSLLARLNSGSFVEKAPEEIVRGVREKASEAEEKISLTKNRLAFLQSTVSS*