Gene Details:
- MSU gene ID: LOC_Os07g06620
- RAPdb gene ID: Os07g0160100
- Gene Symbol: OsYABBY1 OsYAB1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Unlike the Arabidopsis YABBY genes, however, the OsYAB1 gene does not show polar expression pattern in the tissues of floral organs.
- Our transgenic plants that ectopically expressed OsYAB1 were normal during the vegetative growth period, but then showed abnormalities in their floral structures.
- RNA gel-blot analysis showed that the OsYAB1 gene is preferentially expressed in flowers.
- OsYABBY1 is expressed in putative precursor cells of both the mestome sheath in the large vascular bundle and the abaxial sclerenchyma in the leaves.
- In the flower, OsYABBY1 is specifically expressed in the palea and lemma from their inception, and is confined to several cell layers of these organs in the later developmental stages.
- These results suggest that OsYAB1 plays a major role in meristem development and maintenance of stamens and carpels, rather than in determining polarity.
- Ectopic expression of OsYAB1 causes extra stamens and carpels in rice.
Function-related keywords:
- floral , flower , vascular-bundle , lemma , sheath , growth , meristem , vegetative , palea , stamen
Literature:
- Molecular characterization the YABBY gene family in Oryza sativa and expression analysis of OsYABBY1 . DOI: 10.1007/s00438-006-0202-0 ; PMID: 17216490
- Ectopic expression of OsYAB1 causes extra stamens and carpels in rice . DOI: 10.1007/s11103-004-2648-y ; PMID: 15604733
- Functional analysis of rice HOMEOBOX4 (Oshox4) gene reveals a negative function in gibberellin responses . DOI: 10.1007/s11103-007-9270-8 ; PMID: 18049796
- The rice YABBY1 gene is involved in the feedback regulation of gibberellin metabolism . DOI: 10.1104/pp.107.096586 ; PMID: 17369428
Related News:
Gene Resources:
- NCBI ID: AF098752
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os07g06620.1
GATCAGCCAGCAGCTGGTAGTACCCTCTCTAGCTTATTGCAGGGCCATATCCTCTGCTAGCTTAGCTTCTCTCACAAACCCCTTAATTCCATCTCATAGACAGCCAAAAGGGTCAAGAGGAAATTGGGTTTGTGCTCTCCCCAAAATCCTCCATATATAGTGCACAGGAGGCATCATTCTGTTCATACATATCTCTCCCTTGCTTGCTTTGCTCCTGGATATATAGCTAGCTTCTTTCTTTCTTCCTCTCTCCCTGTGTGGCACGCGCCTCCAATCGATCTCTTCGGTGAGTAGACGCATCGAGATCGGGGGGAAATGTCGGTCCAGTTTACATCGGAGCATGTTTGCTATGTCAACTGCAACTATTGCAACACTATCCTTGTGGTGAATGTGCCAAACAATTGTTCCTACAACATTGTGACTGTTAGATGTGGGCATTGCACAATGGTGCTCTCCATGGATCTTGCTCCTTTTCACCAAGCACGCACTGTTCAAGATCACCAGGTACAGAACAGAGGATTTCAAGGTAATAACTTTGGAAGCTATGACATAGCTTCCAGAAATCAGAGGACATCGACAGCCATGTACCCAATGCCAACCAGTCAGCAGCAAGTGTCACCTATACGTCCCCCTGAGAAAAGACAGCGTGTCCCATCTGCATACAACAGATTCATCAAGGAGGAGATACAGAGGATTAAAACCAGCAATCCTGAGATTAGCCACAGGGAGGCATTCAGTGCTGCTGCAAAGAACTGGGCTCATCTTCCCCGGCTCCATTTTGGCCTCAGCGTCGCCGACGGCGGCGGCGGCGGCGGCAGCAACTAATCGCGGCGGCGCGGCCTGCCGGCCGGCCACCGATCGCCGGCGTGCACGCCGGCGCGCGGCGGCGGCCGGTCGAGAATGCGCGCGCAGGAGGGACGACGACGATATATTATTATCGCGTGTGCCCCTCTCTCTTCGCCGCGTAATTAATTAATCAGTTAATTAATTACGTACGACCTACTGTGTTATGCTATCGATCCGTGTTAATTAATTACCTACGTATCTTGATTAATTAGTCTCGTATTATACGTACTATTATACGTACGTGCTGTGCTATGTACGTAGACAACAAAAAAAAATGTGCGTGATGAGTTCTACTACGTACGTACGTACTGTGTTCTAGTGTTTTAATTTGTATCCGAACCAAGGAGTTGTTTAATTAACTGCATGCACATGCACTGGACTTGAATCTGGAGTATTATGTAAGTGTGCATGCATGCTGGATTATGCAAAATAAACGAATTAATGAATAGAACTGTTTTTGTTAATTAATTAATTAAAATGTTTGGTTCAATTTTTCGATGTGTTGATAGTGCATGAATTAAAGCTGTGTACATA - >LOC_Os07g06620.4
GATCAGCCAGCAGCTGGTAGTACCCTCTCTAGCTTATTGCAGGGCCATATCCTCTGCTAGCTTAGCTTCTCTCACAAACCCCTTAATTCCATCTCATAGACAGCCAAAAGGGTCAAGAGGAAATTGGGTTTGTGCTCTCCCCAAAATCCTCCATATATAGTGCACAGGAGGCATCATTCTGTTCATACATATCTCTCCCTTGCTTGCTTTGCTCCTGGATATATAGCTAGCTTCTTTCTTTCTTCCTCTCTCCCTGTGTGGCACGCGCCTCCAATCGATCTCTTCGGTGAGTAGACGCATCGAGATCGGGGGGAAATGTCGGTCCAGTTTACATCGGAGCATGTTTGCTATGTCAACTGCAACTATTGCAACACTATCCTTGTGGTGAATGTGCCAAACAATTGTTCCTACAACATTGTGACTGTTAGATGTGGGCATTGCACAATGGTGCTCTCCATGGATCTTGCTCCTTTTCACCAAGCACGCACTGTTCAAGATCACCAGGTACAGAACAGAGGATTTCAAGGTAATAACTTTGGAAGCTATGACATAGCTTCCAGAAATCAGAGGACATCGACAGCCATGTACCCAATGCCAACCAGTCAGCAGCAAGTGTCACCTATACGTCCCCCTGAGAAAAGACAGCGTGTCCCATCTGCATACAACAGATTCATCAAGGAGGAGATACAGAGGATTAAAACCAGCAATCCTGAGATTAGCCACAGGGAGGCATTCAGTGCTGCTGCAAAGAACTGGGCTCATCTTCCCCGGCTCCATTTTGGCCTCAGCGTCGCCGACGGCGGCGGCGGCGGCGGCAGCAACTAATCGCGGCGGCGCGGCCTGCCGGCCGGCCACCGATCGCCGGCGTGCACGCCGGCGCGCGGCGGCGGCCGGTCGAGAATGCGCGCGCAGGAGGGACGACGACGATATATTATTATCGCGTGTGCCCCTCTCTCTTCGCCGCGTAATTAATTAATCAGTTAATTAATTACGTACGACCTACTGTGTTATGCTATCGATCCGTGTTAATTAATTACCTACGTATCTTGATTAATTAGTCTCGTATTATACGTACTATTATACGTACGTGCTGTGCTATGTACGTAGACAACAAAAAAAAATGTGCGTGATGAGTTCTACTACGTACGTACGTACTGTGTTCTAGTGTTTTAATTTGTATCCGAACCAAGGAGTTGTTTAATTAACTGCATGCACATGCACTGGACTTGAATCTGGAGTATTATGTAAGTGTGCATGCATGCTGGATTATGCAAAATAAACGAATTAATGAATAGAACTGTTTTTGTTAATTAATTAATTAAAATGTTTGGTTCAATTTTTCGATGTGTTGATAGTGCATGAATTAAAGCTGTGTACATA - >LOC_Os07g06620.2
GATCAGCCAGCAGCTGGTAGTACCCTCTCTAGCTTATTGCAGGGCCATATCCTCTGCTAGCTTAGCTTCTCTCACAAACCCCTTAATTCCATCTCATAGACAGCCAAAAGGGTCAAGAGGAAATTGGGTTTGTGCTCTCCCCAAAATCCTCCATATATAGTGCACAGGAGGCATCATTCTGTTCATACATATCTCTCCCTTGCTTGCTTTGCTCCTGGATATATAGCTAGCTTCTTTCTTTCTTCCTCTCTCCCTGTGTGGCACGCGCCTCCAATCGATCTCTTCGGTGAGTAGACGCATCGAGATCGGGGGGAAATGTCGGTCCAGTTTACATCGGAGCATGTTTGCTATGTCAACTGCAACTATTGCAACACTATCCTTGTGGTGAATGTGCCAAACAATTGTTCCTACAACATTGTGACTGTTAGATGTGGGCATTGCACAATGGTGCTCTCCATGGATCTTGCTCCTTTTCACCAAGCACGCACTGTTCAAGATCACCAGGTACAGAACAGAGGATTTCAAGGTAATAACTTTGGAAGCTATGACATAGCTTCCAGAAATCAGAGGACATCGACAGCCATGTACCCAATGCCAACCAGTCAGCAGCAAGTGTCACCTATACGTCCCCCTGAGAAAAGACAGCGTGTCCCATCTGCATACAACAGATTCATCAAGGAGGAGATACAGAGGATTAAAACCAGCAATCCTGAGATTAGCCACAGGGAGGCATTCAGTGCTGCTGCAAAGAACTGGGCTCATCTTCCCCGGCTCCATTTTGGCCTCAGCGTCGCCGACGGCGGCGGCGGCGGCGGCAGCAACTAATCGCGGCGGCGCGGCCTGCCGGCCGGCCACCGATCGCCGGCGTGCACGCCGGCGCGCGGCGGCGGCCGGTCGAGAATGCGCGCGCAGGAGGGACGACGACGATATATTATTATCGCGTGTGCCCCTCTCTCTTCGCCGCGTAATTAATTAATCAGTTAATTAATTACGTACGACCTACTGTGTTATGCTATCGATCCGTGTTAATTAATTACCTACGTATCTTGATTAATTAGTCTCGTATTATACGTACTATTATACGTACGTGCTGTGCTATGTACGTAGACAACAAAAAAAAATGTGCGTGATGAGTTCTACTACGTACGTACGTACTGTGTTCTAGTGTTTTAATTTGTATCCGAACCAAGGAGTTGTTTAATTAACTGCATGCACATGCACTGGACTTGAATCTGGAGTATTATGTAAGTGTGCATGCATGCTGGATTATGCAAAATAAACGAATTAATGAATAGAACTGTTTTTGTTAATTAATTAATTAAAATGTTTGGTTCAATTTTTCGATGTGTTGATAGTGCATGAATTAAAGCTGTGTACATA - >LOC_Os07g06620.3
GATCAGCCAGCAGCTGGTAGTACCCTCTCTAGCTTATTGCAGGGCCATATCCTCTGCTAGCTTAGCTTCTCTCACAAACCCCTTAATTCCATCTCATAGACAGCCAAAAGGGTCAAGAGGAAATTGGGTTTGTGCTCTCCCCAAAATCCTCCATATATAGTGCACAGGAGGCATCATTCTGTTCATACATATCTCTCCCTTGCTTGCTTTGCTCCTGGATATATAGCTAGCTTCTTTCTTTCTTCCTCTCTCCCTGTGTGGCACGCGCCTCCAATCGATCTCTTCGGTGAGTAGACGCATCGAGATCGGGGGGAAATGTCGGTCCAGTTTACATCGGAGCATGTTTGCTATGTCAACTGCAACTATTGCAACACTATCCTTGTGGTGAATGTGCCAAACAATTGTTCCTACAACATTGTGACTGTTAGATGTGGGCATTGCACAATGGTGCTCTCCATGGATCTTGCTCCTTTTCACCAAGCACGCACTGTTCAAGATCACCAGGTACAGAACAGAGGATTTCAAGGTAATAACTTTGGAAGCTATGACATAGCTTCCAGAAATCAGAGGACATCGACAGCCATGTACCCAATGCCAACCAGTCAGCAGCAAGTGTCACCTATACGTCCCCCTGAGAAAAGACAGCGTGTCCCATCTGCATACAACAGATTCATCAAGGAGGAGATACAGAGGATTAAAACCAGCAATCCTGAGATTAGCCACAGGGAGGCATTCAGTGCTGCTGCAAAGAACTGGGCTCATCTTCCCCGGCTCCATTTTGGCCTCAGCGTCGCCGACGGCGGCGGCGGCGGCGGCAGCAACTAATCGCGGCGGCGCGGCCTGCCGGCCGGCCACCGATCGCCGGCGTGCACGCCGGCGCGCGGCGGCGGCCGGTCGAGAATGCGCGCGCAGGAGGGACGACGACGATATATTATTATCGCGTGTGCCCCTCTCTCTTCGCCGCGTAATTAATTAATCAGTTAATTAATTACGTACGACCTACTGTGTTATGCTATCGATCCGTGTTAATTAATTACCTACGTATCTTGATTAATTAGTCTCGTATTATACGTACTATTATACGTACGTGCTGTGCTATGTACGTAGACAACAAAAAAAAATGTGCGTGATGAGTTCTACTACGTACGTACGTACTGTGTTCTAGTGTTTTAATTTGTATCCGAACCAAGGAGTTGTTTAATTAACTGCATGCACATGCACTGGACTTGAATCTGGAGTATTATGTAAGTGTGCATGCATGCTGGATTATGCAAAATAAACGAATTAATGAATAGAACTGTTTTTGTTAATTAATTAATTAAAATGTTTGGTTCAATTTTTCGATGTGTTGATAGTGCATGAATTAAAGCTGTGTACATA
CDS Sequence
- >LOC_Os07g06620.1
ATGTCGGTCCAGTTTACATCGGAGCATGTTTGCTATGTCAACTGCAACTATTGCAACACTATCCTTGTGGTGAATGTGCCAAACAATTGTTCCTACAACATTGTGACTGTTAGATGTGGGCATTGCACAATGGTGCTCTCCATGGATCTTGCTCCTTTTCACCAAGCACGCACTGTTCAAGATCACCAGGTACAGAACAGAGGATTTCAAGGTAATAACTTTGGAAGCTATGACATAGCTTCCAGAAATCAGAGGACATCGACAGCCATGTACCCAATGCCAACCAGTCAGCAGCAAGTGTCACCTATACGTCCCCCTGAGAAAAGACAGCGTGTCCCATCTGCATACAACAGATTCATCAAGGAGGAGATACAGAGGATTAAAACCAGCAATCCTGAGATTAGCCACAGGGAGGCATTCAGTGCTGCTGCAAAGAACTGGGCTCATCTTCCCCGGCTCCATTTTGGCCTCAGCGTCGCCGACGGCGGCGGCGGCGGCGGCAGCAACTAA - >LOC_Os07g06620.4
ATGTCGGTCCAGTTTACATCGGAGCATGTTTGCTATGTCAACTGCAACTATTGCAACACTATCCTTGTGGTGAATGTGCCAAACAATTGTTCCTACAACATTGTGACTGTTAGATGTGGGCATTGCACAATGGTGCTCTCCATGGATCTTGCTCCTTTTCACCAAGCACGCACTGTTCAAGATCACCAGGTACAGAACAGAGGATTTCAAGGTAATAACTTTGGAAGCTATGACATAGCTTCCAGAAATCAGAGGACATCGACAGCCATGTACCCAATGCCAACCAGTCAGCAGCAAGTGTCACCTATACGTCCCCCTGAGAAAAGACAGCGTGTCCCATCTGCATACAACAGATTCATCAAGGAGGAGATACAGAGGATTAAAACCAGCAATCCTGAGATTAGCCACAGGGAGGCATTCAGTGCTGCTGCAAAGAACTGGGCTCATCTTCCCCGGCTCCATTTTGGCCTCAGCGTCGCCGACGGCGGCGGCGGCGGCGGCAGCAACTAA - >LOC_Os07g06620.2
ATGTCGGTCCAGTTTACATCGGAGCATGTTTGCTATGTCAACTGCAACTATTGCAACACTATCCTTGTGGTGAATGTGCCAAACAATTGTTCCTACAACATTGTGACTGTTAGATGTGGGCATTGCACAATGGTGCTCTCCATGGATCTTGCTCCTTTTCACCAAGCACGCACTGTTCAAGATCACCAGGTACAGAACAGAGGATTTCAAGGTAATAACTTTGGAAGCTATGACATAGCTTCCAGAAATCAGAGGACATCGACAGCCATGTACCCAATGCCAACCAGTCAGCAGCAAGTGTCACCTATACGTCCCCCTGAGAAAAGACAGCGTGTCCCATCTGCATACAACAGATTCATCAAGGAGGAGATACAGAGGATTAAAACCAGCAATCCTGAGATTAGCCACAGGGAGGCATTCAGTGCTGCTGCAAAGAACTGGGCTCATCTTCCCCGGCTCCATTTTGGCCTCAGCGTCGCCGACGGCGGCGGCGGCGGCGGCAGCAACTAA - >LOC_Os07g06620.3
ATGTCGGTCCAGTTTACATCGGAGCATGTTTGCTATGTCAACTGCAACTATTGCAACACTATCCTTGTGGTGAATGTGCCAAACAATTGTTCCTACAACATTGTGACTGTTAGATGTGGGCATTGCACAATGGTGCTCTCCATGGATCTTGCTCCTTTTCACCAAGCACGCACTGTTCAAGATCACCAGGTACAGAACAGAGGATTTCAAGGTAATAACTTTGGAAGCTATGACATAGCTTCCAGAAATCAGAGGACATCGACAGCCATGTACCCAATGCCAACCAGTCAGCAGCAAGTGTCACCTATACGTCCCCCTGAGAAAAGACAGCGTGTCCCATCTGCATACAACAGATTCATCAAGGAGGAGATACAGAGGATTAAAACCAGCAATCCTGAGATTAGCCACAGGGAGGCATTCAGTGCTGCTGCAAAGAACTGGGCTCATCTTCCCCGGCTCCATTTTGGCCTCAGCGTCGCCGACGGCGGCGGCGGCGGCGGCAGCAACTAA
Protein Sequence
- >LOC_Os07g06620.1
MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDHQVQNRGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSVADGGGGGGSN* - >LOC_Os07g06620.4
MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDHQVQNRGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSVADGGGGGGSN* - >LOC_Os07g06620.2
MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDHQVQNRGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSVADGGGGGGSN* - >LOC_Os07g06620.3
MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDHQVQNRGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSVADGGGGGGSN*