Information report for OsTCP21
Gene Details
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Functional Descriptions
- oryzae strain Guy11 specifically induced rice miR319 expression, and consequently suppressed its target gene, OsTCP21 (TEOSINTE BRANCHED/CYCLOIDEA/PCF), which encodes a transcription factor.
- By using miR319b-OE and OsTCP21-Res (resistant to miR319-mediated silencing) transgenic rice, we found that OsTCP21 is a positive regulator of rice defense response against the blast disease.
- MiR319-targeted OsTCP21 and OsGAmyb regulate tillering and grain yield in rice.
- These data suggest that miR319 regulates rice tiller bud development and tillering through targeting OsTCP21 and OsGAmyb.
- Notably, the tiller number and grain yield increased in STTM319 and overexpression lines of OsTCP21 and OsGAmyb but decreased in OE319a and knockout lines of OsTCP21 and OsGAmyb.
- Taken together, our findings indicate that miR319s negatively affect tiller number and grain yield by targeting OsTCP21 and OsGAmyb, revealing a novel function for miR319 in rice.
- Moreover, OsTCP21 and OsGAmyb overexpression lines and STTM319 had increased tiller bud length and biomass, whereas both were decreased in OsTCP21 and OsGAmyb knockout lines and OE319a.
Functional Keywords
- transcription-factor , defense , defense-response , disease , blast , blast-disease , tillering , development , grain , tiller , grain-yield , yield , tiller-number
Literature and News
- Suppression of Jasmonic Acid-Mediated Defense by Viral-Inducible MicroRNA319 Facilitates Virus Infection in Rice . DOI: 10.1016/j.molp.2016.06.014 ; PMID: 27381440
- Magnaporthe oryzae Induces the Expression of a MicroRNA to Suppress the Immune Response in Rice . DOI: 10.1104/pp.17.01665 ; PMID: 29549093
- In planta transcriptome analysis reveals tissue-specific expression of pathogenicity genes and microRNAs during rice-Magnaporthe interactions . DOI: 10.1016/j.ygeno.2020.12.018 ; PMID: 33326830
- MiR319-targeted OsTCP21 and OsGAmyb regulate tillering and grain yield in rice . DOI: 10.1111/jipb.13097 ; PMID: 33838011
Gene Resources
- UniProt: Q0D8K4
- EMBL: AP014963
- AlphaFoldDB: Q0D8K4
- EnsemblPlants: Os07t0152000-01
- Gramene: Os07t0152000-01
- KEGG: osa:4342416
- Orthologous matrix: RNWNNPS
- InterPro: IPR005333, IPR017887, IPR017888
- PANTHER: PTHR31072, PTHR31072:SF93
- PROSITE: PS51369, PS51370
- OrthoDB: Q0D8K4
- SWISS-MODEL: Q0D8K4
- eggNOG: ENOG502QQFU
Sequences
cDNA Sequence
- >LOC_Os07g05720.1
ATTTCAATTTTCCTTTTCCCCTCATAAAATCACTCTCCCTCTTCTCTCTTCCTCTTCTCCCCCCAAAAACCTCGCCTCCGCCCGATCGCCTCGCCGCCTTAACCCCCACCCCCGATCTCCTTCCTCACCGACGACGCGCGCCCCACTCCCCCCACCTCAATGCGCGCTTCCTAGGGCATATGACCGGTACTACGACAACCATCACCTCTCGCCGTCACCGTCATCGTCGGGATGGAGCTCGCCGGCAGCAACAACAAGCGGGGGAGGGTGAGGGGGCCCAACGACGACGACGACGACGCCGGGGAGCCGGACGCCAAGCGCCATCACCACCAGCTGCTGTTGCCGTGGCCGCAGCAGCAGCAGCAGCAGCATCCGGCGTCGCGGATCTACCGGGTGTCGCGGGCCTCCGGCGGGAAGGACCGCCACAGCAAGGTGTACACGGCCAAGGGCATCCGCGACCGCCGCGTCCGCCTCTCCGTCTCCACCGCCATCCAGTTCTACGACCTCCAGGATCGTCTCGGGTATGACCAGCCGAGCAAGGCCATCGAGTGGCTCATTAAGGCCGCCGCCGCCGCCATCGACAAGCTCCCTTCGCTTGATACCGCTTCCTTCCCCACCAACCCCGCCTCCTCCGCCGCTGTTGCTGCTGCTGCTGCTCCTCCTCTTCCCCATGCCGAACGCGAGCAGCAGCAGCAGCTCACCAAGTCCGGATGCAGTAGCACGTCGGAGACCAGCAAGGGCTCCGTCCTCTCCCTCTCCCGCTCCGAGAGCCGCGTCAAGGCCAGGGAGCGCGCCAGGGAGCGGAGCAGCGCGGCCGCCGCCGCGGCATCCAAGGACGCCGGGGACGACGCCGCCACCCCCACCGCGCCCACCGCCGCGCCCGCCTCCTCGCAGGCGGCTTCCTTCACCGAGCTACTCACCGGGATGGCCGCAGCCAACGCCTCACCCGCTGACCACAAGCAGCAGCAGGCGTGGCAGCCGATGACCGTCGCCGCGGCCACCGCCGACTACATCGGCTTCGCCGCCGCCGCCGCGCCGCATACGCAGCCGCGGAAATCCGCCGCGGGCCATCACTCCGCGATGCCGCACACCTTCGCATCACCCGCTCCCCACCTCGCCAACATCACCCCCATCGCCATGGCGCCCGCGCAGCACTTCACCCTCACACCCGCCGCCGCCGAGCACCACGCGGAGATGACGCACTACTCGTTCGACCACTTCATGCCCGTCCACGCGGCAGCAGCGGCGGCGGCGGCGGCCTCCACCCCGGCCGGCGGCGACTACAACCTCAACTTCTCCATGTCCTCGGGTCTTGTGGGTGTCCACAGTAGGGGGACCCTTCAGTCCAATTCGCAGTCTCACCTCTCCAGCCATCACCACCACCATCACCAGCAACAGCAGCAGCAGCAGCAGCTGCAGAGGCTGTCTGCTCCGCTGGATGCGCCCAACATTCCGTTCCTCTTCAGCCCGGCCGCCGCGCCCACCGCCGCGGACACCCAGTTCGCCGCCGCATTGCAGCTCTGGGACGGGTTCCGGCACGCCGACATCAAGGAGAAGGGCAAGCACTGATCAGATCAGCAGCCGCGGGCATCGACGGCGACGTCTCTTCTTGGATGGAAGTGAAAACATCAAAACGTTGCAAGCCATTCCTGTGAGCAACATCCACAGCTTGAAGCTGCCATAAGTGAATGCTGGATGCATTCTCGGAAGTAGAGCATCAACTGCACATCTACCTTGGTCACGGGAGGACCTCATCATCGCTATTCAGATGATCTTGTGCTTTTCTCTGCCTGTTGTTGTATTCATTTTGTTGAGTTGAGAATTTGGGAGCATTACTCGCCGGAGTGCCCTGAGGAGGGGACGCCCTTGTAATCCTTTCTGTTGTAAACTATGTCAATGGATGCATGCGGCTCTGGACTGGATTGGTTCTTTGCCTCTTTTGACACTGTGAGATCGGTTGCCTGTCAATTTTATTGTTCTCGGTTGTGAGAGAAGTAAAGAACTTGAAATCCAATCTATCAGATGTACTCTATCTGCGGTGAATTCTTGCCAAATACTGTACTCTTGAGAGATGTAAATTCAACTTGTTTCTAGTGGCTGTTGGTTGTC
CDS Sequence
- >LOC_Os07g05720.1
ATGGAGCTCGCCGGCAGCAACAACAAGCGGGGGAGGGTGAGGGGGCCCAACGACGACGACGACGACGCCGGGGAGCCGGACGCCAAGCGCCATCACCACCAGCTGCTGTTGCCGTGGCCGCAGCAGCAGCAGCAGCAGCATCCGGCGTCGCGGATCTACCGGGTGTCGCGGGCCTCCGGCGGGAAGGACCGCCACAGCAAGGTGTACACGGCCAAGGGCATCCGCGACCGCCGCGTCCGCCTCTCCGTCTCCACCGCCATCCAGTTCTACGACCTCCAGGATCGTCTCGGGTATGACCAGCCGAGCAAGGCCATCGAGTGGCTCATTAAGGCCGCCGCCGCCGCCATCGACAAGCTCCCTTCGCTTGATACCGCTTCCTTCCCCACCAACCCCGCCTCCTCCGCCGCTGTTGCTGCTGCTGCTGCTCCTCCTCTTCCCCATGCCGAACGCGAGCAGCAGCAGCAGCTCACCAAGTCCGGATGCAGTAGCACGTCGGAGACCAGCAAGGGCTCCGTCCTCTCCCTCTCCCGCTCCGAGAGCCGCGTCAAGGCCAGGGAGCGCGCCAGGGAGCGGAGCAGCGCGGCCGCCGCCGCGGCATCCAAGGACGCCGGGGACGACGCCGCCACCCCCACCGCGCCCACCGCCGCGCCCGCCTCCTCGCAGGCGGCTTCCTTCACCGAGCTACTCACCGGGATGGCCGCAGCCAACGCCTCACCCGCTGACCACAAGCAGCAGCAGGCGTGGCAGCCGATGACCGTCGCCGCGGCCACCGCCGACTACATCGGCTTCGCCGCCGCCGCCGCGCCGCATACGCAGCCGCGGAAATCCGCCGCGGGCCATCACTCCGCGATGCCGCACACCTTCGCATCACCCGCTCCCCACCTCGCCAACATCACCCCCATCGCCATGGCGCCCGCGCAGCACTTCACCCTCACACCCGCCGCCGCCGAGCACCACGCGGAGATGACGCACTACTCGTTCGACCACTTCATGCCCGTCCACGCGGCAGCAGCGGCGGCGGCGGCGGCCTCCACCCCGGCCGGCGGCGACTACAACCTCAACTTCTCCATGTCCTCGGGTCTTGTGGGTGTCCACAGTAGGGGGACCCTTCAGTCCAATTCGCAGTCTCACCTCTCCAGCCATCACCACCACCATCACCAGCAACAGCAGCAGCAGCAGCAGCTGCAGAGGCTGTCTGCTCCGCTGGATGCGCCCAACATTCCGTTCCTCTTCAGCCCGGCCGCCGCGCCCACCGCCGCGGACACCCAGTTCGCCGCCGCATTGCAGCTCTGGGACGGGTTCCGGCACGCCGACATCAAGGAGAAGGGCAAGCACTGA
Protein Sequence
- >LOC_Os07g05720.1
MELAGSNNKRGRVRGPNDDDDDAGEPDAKRHHHQLLLPWPQQQQQQHPASRIYRVSRASGGKDRHSKVYTAKGIRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAIEWLIKAAAAAIDKLPSLDTASFPTNPASSAAVAAAAAPPLPHAEREQQQQLTKSGCSSTSETSKGSVLSLSRSESRVKARERARERSSAAAAAASKDAGDDAATPTAPTAAPASSQAASFTELLTGMAAANASPADHKQQQAWQPMTVAAATADYIGFAAAAAPHTQPRKSAAGHHSAMPHTFASPAPHLANITPIAMAPAQHFTLTPAAAEHHAEMTHYSFDHFMPVHAAAAAAAAASTPAGGDYNLNFSMSSGLVGVHSRGTLQSNSQSHLSSHHHHHHQQQQQQQQLQRLSAPLDAPNIPFLFSPAAAPTAADTQFAAALQLWDGFRHADIKEKGKH*