Information report for OsSYF2
Gene Details
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Functional Descriptions
- A Cyclophilin OsCYP20-2 Interacts with OsSYF2 to Regulate Grain Length by Pre-mRNA Splicing.
- The phenotypes of transgenic lines indicated that OsSYF2 positively regulates grain length via its influence on cell expansion.
- Transcriptomic analysis showed that OsSYF2 controls the expression and pre-mRNA alternative splicing of genes involved in sugar metabolism.
Functional Keywords
- grain , grain-length , sugar
Literature and News
Gene Resources
- UniProt: Q5Z7Y7
- EMBL: AK064384, AK102831, AP014962
- AlphaFoldDB: Q5Z7Y7
- EnsemblPlants: Os06t0711600-01, Os06t0711600-02
- Gramene: Os06t0711600-01, Os06t0711600-02
- KEGG: osa:4342038
Sequences
cDNA Sequence
- >LOC_Os06g49740.1
AATCCCCAATTCGCACGCGGAGCTAATCCTCTTCTAGGGTTCCGACGAATCCCGAGCTCGGAGGCCGATGGCGTCGTCGTCGTCGGCGGCGTCGGGGAAGTCGCGGCCGGAGTGCATCAACTCGTCGAACCCGTTCCACGAGTGCTCCGACTACTGCCTCCGCAAGATCGCCGAGGCCAAGGAGCGCATCGAGGACGAGCAGCGGCCGCCGGTGGACCGCACCGTCCACCCCGACTGCATCAACGCCTCCAACCCCTACCACGTCTGCTCCGAGTACTGCTTCAAGAGGATCGCCGACGCCAAATCAGGGTTGGAGCGTGCGGAGCAAGAACCGCCTTCTGCAGACGCTGGCAAATCCGACGCTGCCCAAGCTGAGGGTGGTGGTGGTGATGATGATGCGGAGCAGGAGGACGCCGGCTCAGACGACGGTTACCCGCAGATGACAGAGAAGCAGAAGAAGCTATTTGAGTTGCGGCTGAAGATGAATGAAGCTAGGAAGGCAAATCAGCAAGCGATGGTGGCAGAGAAGAAGAGGATGGAGCCTCGCGCTGAGAGTAGAGGTGTTTCTAAACAAAAGTGGCTGGAAGACAGAAAAAAGAAGATCGGAAAGCTTCTTGACTCAAATGGCCTGGACATGACAAAGTCTTACATGCTCGATACACAGGAGTCGGCCGAAGCAAAATACAAGAAGTGGGAAAAGGAACCTGCACCATATGGTTGGGATGTTTTCAACCAGAAGACCTTATATGATGCATACAAAAAGAGGACCAAGAACATTGAGGTTGACATGGAGGCATACAACAAAGCAAAGGAAGCCGATCCTGAATTTTATCGGGACGCTTCAAGTCTCCAATATGGGAAGGTGTCTAAGGTCCCGGAAGAAAACATAGACAGGATGGTTAATGAGCTTAAGGAACGGGATGAGAAACGGAAAGCATTCAGCAGGAGGCGCAAGTTCCATGAAGACAAGGACATTGACTCGATCAATGACCGGAACGAACACTTCAACAAGAAGGTTGAGAGGGCATTTGGCAAGTATACTCTTGAGATCAAGAACAATCTTGAAAGGGGGACTGCCTTGCCAGATTAGAAACTCTGCACACTCTGCTGGTAGAGAGTGGACATGTTGTCTGTTTCCCCAGCTGTCTTTTGCTTGTAAGTTGTAACCTATCAACAATTTGCTTGGAAACTGTAACTGTAAGAAAGCCAACTCGGATGTAATGTCGTGAGAATATAGCATATTCGAGAAGTTGTGTATCCAAAATGAGCGGAATCATTAACTATAGTGATTTTGCAATGTATCCAAATGAGCATAATCATTAACTGTAGTGGTGTGCTGGTGCCCCAAATGTCTTGCAAT - >LOC_Os06g49740.2
AATCCCCAATTCGCACGCGGAGCTAATCCTCTTCTAGGGTTCCGACGAATCCCGAGCTCGGAGGCCGATGGCGTCGTCGTCGTCGGCGGCGTCGGGGAAGTCGCGGCCGGAGTGCATCAACTCGTCGAACCCGTTCCACGAGTGCTCCGACTACTGCCTCCGCAAGATCGCCGAGGCCAAGGAGCGCATCGAGGACGAGCAGCGGCCGCCGGTGGACCGCACCGTCCACCCCGACTGCATCAACGCCTCCAACCCCTACCACGTCTGCTCCGAGTACTGCTTCAAGAGGATCGCCGACGCCAAATCAGGGTTGGAGCGTGCGGAGCAAGAACCGCCTTCTGCAGACGCTGGCAAATCCGACGCTGCCCAAGCTGAGGGTGGTGGTGGTGATGATGATGCGGAGCAGGAGGACGCCGGCTCAGACGACGGTTACCCGCAGATGACAGAGAAGCAGAAGAAGCTATTTGAGTTGCGGCTGAAGATGAATGAAGCTAGGAAGGCAAATCAGCAAGCGATGGTGGCAGAGAAGAAGAGGATGGAGCCTCGCGCTGAGAGTAGAGGTGTTTCTAAACAAAAGTGGCTGGAAGACAGAAAAAAGAAGATCGGAAAGCTTCTTGACTCAAATGGCCTGGACATGACAAAGTCTTACATGCTCGATACACAGGAGTCGGCCGAAGCAAAATACAAGAAGTGGGAAAAGGAACCTGCACCATATGGTTGGGATGTTTTCAACCAGAAGACCTTATATGATGCATACAAAAAGAGGACCAAGAACATTGAGGTTGACATGGAGGCATACAACAAAGCAAAGGAAGCCGATCCTGAATTTTATCGGGACGCTTCAAGTCTCCAATATGGGAAGGTGTCTAAGGTCCCGGAAGAAAACATAGACAGGATGGTTAATGAGCTTAAGGAACGGGATGAGAAACGGAAAGCATTCAGCAGGAGGCGCAAGTTCCATGAAGACAAGGACATTGACTCGATCAATGACCGGAACGAACACTTCAACAAGAAGGTTGAGAGGGCATTTGGCAAGTATACTCTTGAGATCAAGAACAATCTTGAAAGGGGGACTGCCTTGCCAGATTAGAAACTCTGCACACTCTGCTGGTAGAGAGTGGACATGTTGTCTGTTTCCCCAGCTGTCTTTTGCTTGTAAGTTGTAACCTATCAACAATTTGCTTGGAAACTGTAACTGTAAGAAAGCCAACTCGGATGTAATGTCGTGAGAATATAGCATATTCGAGAAGTTGTGTATCCAAAATGAGCGGAATCATTAACTATAGTGATTTTGCAATGTATCCAAATGAGCATAATCATTAACTGTAGTGGTGTGCTGGTGCCCCAAATGTCTTGCAAT
CDS Sequence
- >LOC_Os06g49740.1
ATGGCGTCGTCGTCGTCGGCGGCGTCGGGGAAGTCGCGGCCGGAGTGCATCAACTCGTCGAACCCGTTCCACGAGTGCTCCGACTACTGCCTCCGCAAGATCGCCGAGGCCAAGGAGCGCATCGAGGACGAGCAGCGGCCGCCGGTGGACCGCACCGTCCACCCCGACTGCATCAACGCCTCCAACCCCTACCACGTCTGCTCCGAGTACTGCTTCAAGAGGATCGCCGACGCCAAATCAGGGTTGGAGCGTGCGGAGCAAGAACCGCCTTCTGCAGACGCTGGCAAATCCGACGCTGCCCAAGCTGAGGGTGGTGGTGGTGATGATGATGCGGAGCAGGAGGACGCCGGCTCAGACGACGGTTACCCGCAGATGACAGAGAAGCAGAAGAAGCTATTTGAGTTGCGGCTGAAGATGAATGAAGCTAGGAAGGCAAATCAGCAAGCGATGGTGGCAGAGAAGAAGAGGATGGAGCCTCGCGCTGAGAGTAGAGGTGTTTCTAAACAAAAGTGGCTGGAAGACAGAAAAAAGAAGATCGGAAAGCTTCTTGACTCAAATGGCCTGGACATGACAAAGTCTTACATGCTCGATACACAGGAGTCGGCCGAAGCAAAATACAAGAAGTGGGAAAAGGAACCTGCACCATATGGTTGGGATGTTTTCAACCAGAAGACCTTATATGATGCATACAAAAAGAGGACCAAGAACATTGAGGTTGACATGGAGGCATACAACAAAGCAAAGGAAGCCGATCCTGAATTTTATCGGGACGCTTCAAGTCTCCAATATGGGAAGGTGTCTAAGGTCCCGGAAGAAAACATAGACAGGATGGTTAATGAGCTTAAGGAACGGGATGAGAAACGGAAAGCATTCAGCAGGAGGCGCAAGTTCCATGAAGACAAGGACATTGACTCGATCAATGACCGGAACGAACACTTCAACAAGAAGGTTGAGAGGGCATTTGGCAAGTATACTCTTGAGATCAAGAACAATCTTGAAAGGGGGACTGCCTTGCCAGATTAG - >LOC_Os06g49740.2
ATGGCGTCGTCGTCGTCGGCGGCGTCGGGGAAGTCGCGGCCGGAGTGCATCAACTCGTCGAACCCGTTCCACGAGTGCTCCGACTACTGCCTCCGCAAGATCGCCGAGGCCAAGGAGCGCATCGAGGACGAGCAGCGGCCGCCGGTGGACCGCACCGTCCACCCCGACTGCATCAACGCCTCCAACCCCTACCACGTCTGCTCCGAGTACTGCTTCAAGAGGATCGCCGACGCCAAATCAGGGTTGGAGCGTGCGGAGCAAGAACCGCCTTCTGCAGACGCTGGCAAATCCGACGCTGCCCAAGCTGAGGGTGGTGGTGGTGATGATGATGCGGAGCAGGAGGACGCCGGCTCAGACGACGGTTACCCGCAGATGACAGAGAAGCAGAAGAAGCTATTTGAGTTGCGGCTGAAGATGAATGAAGCTAGGAAGGCAAATCAGCAAGCGATGGTGGCAGAGAAGAAGAGGATGGAGCCTCGCGCTGAGAGTAGAGGTGTTTCTAAACAAAAGTGGCTGGAAGACAGAAAAAAGAAGATCGGAAAGCTTCTTGACTCAAATGGCCTGGACATGACAAAGTCTTACATGCTCGATACACAGGAGTCGGCCGAAGCAAAATACAAGAAGTGGGAAAAGGAACCTGCACCATATGGTTGGGATGTTTTCAACCAGAAGACCTTATATGATGCATACAAAAAGAGGACCAAGAACATTGAGGTTGACATGGAGGCATACAACAAAGCAAAGGAAGCCGATCCTGAATTTTATCGGGACGCTTCAAGTCTCCAATATGGGAAGGTGTCTAAGGTCCCGGAAGAAAACATAGACAGGATGGTTAATGAGCTTAAGGAACGGGATGAGAAACGGAAAGCATTCAGCAGGAGGCGCAAGTTCCATGAAGACAAGGACATTGACTCGATCAATGACCGGAACGAACACTTCAACAAGAAGGTTGAGAGGGCATTTGGCAAGTATACTCTTGAGATCAAGAACAATCTTGAAAGGGGGACTGCCTTGCCAGATTAG
Protein Sequence
- >LOC_Os06g49740.1
MASSSSAASGKSRPECINSSNPFHECSDYCLRKIAEAKERIEDEQRPPVDRTVHPDCINASNPYHVCSEYCFKRIADAKSGLERAEQEPPSADAGKSDAAQAEGGGGDDDAEQEDAGSDDGYPQMTEKQKKLFELRLKMNEARKANQQAMVAEKKRMEPRAESRGVSKQKWLEDRKKKIGKLLDSNGLDMTKSYMLDTQESAEAKYKKWEKEPAPYGWDVFNQKTLYDAYKKRTKNIEVDMEAYNKAKEADPEFYRDASSLQYGKVSKVPEENIDRMVNELKERDEKRKAFSRRRKFHEDKDIDSINDRNEHFNKKVERAFGKYTLEIKNNLERGTALPD* - >LOC_Os06g49740.2
MASSSSAASGKSRPECINSSNPFHECSDYCLRKIAEAKERIEDEQRPPVDRTVHPDCINASNPYHVCSEYCFKRIADAKSGLERAEQEPPSADAGKSDAAQAEGGGGDDDAEQEDAGSDDGYPQMTEKQKKLFELRLKMNEARKANQQAMVAEKKRMEPRAESRGVSKQKWLEDRKKKIGKLLDSNGLDMTKSYMLDTQESAEAKYKKWEKEPAPYGWDVFNQKTLYDAYKKRTKNIEVDMEAYNKAKEADPEFYRDASSLQYGKVSKVPEENIDRMVNELKERDEKRKAFSRRRKFHEDKDIDSINDRNEHFNKKVERAFGKYTLEIKNNLERGTALPD*