Gene Details:
- MSU gene ID: LOC_Os06g49450
- RAPdb gene ID: Os06g0708200
- Gene Symbol: OsMTOPVIB
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsMTOPVIB promotes meiotic DNA double-strand break formation in rice.
- OsMTOPVIB is required for meiotic bipolar spindle assembly.
Function-related keywords:
Literature:
- OsMTOPVIB Promotes Meiotic DNA Double-Strand Break Formation in Rice . DOI: 10.1016/j.molp.2016.07.005 ; PMID: 27456761
- OsMTOPVIB is required for meiotic bipolar spindle assembly . DOI: 10.1073/pnas.1821315116 ; PMID: 31341087
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g49450.1
CTTCTTATTCGTATTTGTGTTGACGGGTACCGTGGATTCCACCGGCGGCGCAGAGCCGGAGACCGGAGGGCGGCGGAACTCCGGCGAGCTCGGCGGTGACCGACGGTGGAAGGAAGGTGCATTGTTCGTCAGTACACCAAGCTCTCATCAACTCGCCGAGCGCTTCCCCTCCCTCCGCTCCATCCATCCATGGCGTCCTCCCCGCCTCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCTTGATTTACTGGGCGGTGCAGCGCTGCCGGATGTCGGAGTCGCCGTGCCGGCTCACGGTCTCCGTCAAGCGCTCCCCGGAACCCGCTGGTTCCTCGCCCCTGCGTATATCTGTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCTTAATCACAACTACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCTTCAAGCACAAGATTTACCAAGCTAGTGACCACTGGAACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAATATTATGGTTGGTTGGTTTTGTCCGCAAGATATTCGTGCTAAGAGCATCTAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGCTTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGCTACTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGAACAACTTTCATATAGAAAGTTTTCACACGAAACGCACCGTTTTACGGTTTGAAAAGCGTGCCATGAGTATCCAAAAGTTAATCCAACCTAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAG - >LOC_Os06g49450.3
CTTCTTATTCGTATTTGTGTTGACGGGTACCGTGGATTCCACCGGCGGCGCAGAGCCGGAGACCGGAGGGCGGCGGAACTCCGGCGAGCTCGGCGGTGACCGACGGTGGAAGGAAGGTGCATTGTTCGTCAGTACACCAAGCTCTCATCAACTCGCCGAGCGCTTCCCCTCCCTCCGCTCCATCCATCCATGGCGTCCTCCCCGCCTCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCTTGATTTACTGGGCGGTGCAGCGCTGCCGGATGTCGGAGTCGCCGTGCCGGCTCACGGTCTCCGTCAAGCGCTCCCCGGAACCCGCTGGTTCCTCGCCCCTGCGTATATCTGTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCTTAATCACAACTACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCTTCAAGCACAAGATTTACCAAGCTAGTGACCACTGGAACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAATATTATGGTTGGTTGGTTTTGTCCGCAAGATATTCGTGCTAAGAGCATCTAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGCTTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGCTACTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGAACAACTTTCATATAGAAAGTTTTCACACGAAACGCACCGTTTTACGGTTTGAAAAGCGTGCCATGAGTATCCAAAAGTTAATCCAACCTAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAG - >LOC_Os06g49450.2
CTTCTTATTCGTATTTGTGTTGACGGGTACCGTGGATTCCACCGGCGGCGCAGAGCCGGAGACCGGAGGGCGGCGGAACTCCGGCGAGCTCGGCGGTGACCGACGGTGGAAGGAAGGTGCATTGTTCGTCAGTACACCAAGCTCTCATCAACTCGCCGAGCGCTTCCCCTCCCTCCGCTCCATCCATCCATGGCGTCCTCCCCGCCTCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCTTGATTTACTGGGCGGTGCAGCGCTGCCGGATGTCGGAGTCGCCGTGCCGGCTCACGGTCTCCGTCAAGCGCTCCCCGGAACCCGCTGGTTCCTCGCCCCTGCGTATATCTGTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCTTAATCACAACTACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCTTCAAGCACAAGATTTACCAAGCTAGTGACCACTGGAACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAATATTATGGTTGGTTGGTTTTGTCCGCAAGATATTCGTGCTAAGAGCATCTAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGCTTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGCTACTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGAACAACTTTCATATAGAAAGTTTTCACACGAAACGCACCGTTTTACGGTTTGAAAAGCGTGCCATGAGTATCCAAAAGTTAATCCAACCTAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAG
CDS Sequence
- >LOC_Os06g49450.1
ATGGCGTCCTCCCCGCCTCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCTTGATTTACTGGGCGGTGCAGCGCTGCCGGATGTCGGAGTCGCCGTGCCGGCTCACGGTCTCCGTCAAGCGCTCCCCGGAACCCGCTGGTTCCTCGCCCCTGCGTATATCTGTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCTTAATCACAACTACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCTTCAAGCACAAGATTTACCAAGCTAGTGACCACTGGAACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAATATTATGGTTGGTTGGTTTTGTCCGCAAGATATTCGTGCTAAGAGCATCTAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGCTTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGCTACTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGAACAACTTTCATATAGAAAGTTTTCACACGAAACGCACCGTTTTACGGTTTGAAAAGCGTGCCATGAGTATCCAAAAGTTAATCCAACCTAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAG - >LOC_Os06g49450.3
ATGGCGTCCTCCCCGCCTCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCTTGATTTACTGGGCGGTGCAGCGCTGCCGGATGTCGGAGTCGCCGTGCCGGCTCACGGTCTCCGTCAAGCGCTCCCCGGAACCCGCTGGTTCCTCGCCCCTGCGTATATCTGTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCTTAATCACAACTACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCTTCAAGCACAAGATTTACCAAGCTAGTGACCACTGGAACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAATATTATGGTTGGTTGGTTTTGTCCGCAAGATATTCGTGCTAAGAGCATCTAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGCTTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGCTACTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGAACAACTTTCATATAGAAAGTTTTCACACGAAACGCACCGTTTTACGGTTTGAAAAGCGTGCCATGAGTATCCAAAAGTTAATCCAACCTAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAG - >LOC_Os06g49450.2
ATGGCGTCCTCCCCGCCTCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCTTGATTTACTGGGCGGTGCAGCGCTGCCGGATGTCGGAGTCGCCGTGCCGGCTCACGGTCTCCGTCAAGCGCTCCCCGGAACCCGCTGGTTCCTCGCCCCTGCGTATATCTGTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCTTAATCACAACTACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCTTCAAGCACAAGATTTACCAAGCTAGTGACCACTGGAACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAATATTATGGTTGGTTGGTTTTGTCCGCAAGATATTCGTGCTAAGAGCATCTAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGCTTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGCTACTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGAACAACTTTCATATAGAAAGTTTTCACACGAAACGCACCGTTTTACGGTTTGAAAAGCGTGCCATGAGTATCCAAAAGTTAATCCAACCTAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAG
Protein Sequence
- >LOC_Os06g49450.1
MASSPPPSTASPTSSSPYRKLLHSLIYWAVQRCRMSESPCRLTVSVKRSPEPAGSSPLRISVSDTGVGSKLEEFLELDALARETPVEKWDGTLLITTTGIDDKAIYRYQFNLQEDTSSSTRFTKLVTTGTEVCLCLPTEADVDDLILWLVGFVRKIFVLRASNLACELFVAQTDSAGSGDVCLSQDSDDVHISITTSSIDRLVSGLKDYALSHANTSDRCEACYMNRDRLKIGTGTAKYVDKRKAKGQLVEVVIMLAPTSSDLSCWMTNCSSTQVLHFVEFIPCPISQSSLSALMSIDWQSYATAVDEWKSSQPERHLLRKALKSALFGLKADHAEDFLSCHGQKNNFHIESFHTKRTVLRFEKRAMSIQKLIQPKVREYVPDLAESIAGLILSSNDQEFQDECIALLGLGSDQDLTEGAVRSCIGEKMNRIVEMNDTKENVEHNAPYLFECERFDEDYSLLDEDDPDEDMIFDF* - >LOC_Os06g49450.3
MASSPPPSTASPTSSSPYRKLLHSLIYWAVQRCRMSESPCRLTVSVKRSPEPAGSSPLRISVSDTGVGSKLEEFLELDALARETPVEKWDGTLLITTTGIDDKAIYRYQFNLQEDTSSSTRFTKLVTTGTEVCLCLPTEADVDDLILWLVGFVRKIFVLRASNLACELFVAQTDSAGSGDVCLSQDSDDVHISITTSSIDRLVSGLKDYALSHANTSDRCEACYMNRDRLKIGTGTAKYVDKRKAKGQLVEVVIMLAPTSSDLSCWMTNCSSTQVLHFVEFIPCPISQSSLSALMSIDWQSYATAVDEWKSSQPERHLLRKALKSALFGLKADHAEDFLSCHGQKNNFHIESFHTKRTVLRFEKRAMSIQKLIQPKVREYVPDLAESIAGLILSSNDQEFQDECIALLGLGSDQDLTEGAVRSCIGEKMNRIVEMNDTKENVEHNAPYLFECERFDEDYSLLDEDDPDEDMIFDF* - >LOC_Os06g49450.2
MASSPPPSTASPTSSSPYRKLLHSLIYWAVQRCRMSESPCRLTVSVKRSPEPAGSSPLRISVSDTGVGSKLEEFLELDALARETPVEKWDGTLLITTTGIDDKAIYRYQFNLQEDTSSSTRFTKLVTTGTEVCLCLPTEADVDDLILWLVGFVRKIFVLRASNLACELFVAQTDSAGSGDVCLSQDSDDVHISITTSSIDRLVSGLKDYALSHANTSDRCEACYMNRDRLKIGTGTAKYVDKRKAKGQLVEVVIMLAPTSSDLSCWMTNCSSTQVLHFVEFIPCPISQSSLSALMSIDWQSYATAVDEWKSSQPERHLLRKALKSALFGLKADHAEDFLSCHGQKNNFHIESFHTKRTVLRFEKRAMSIQKLIQPKVREYVPDLAESIAGLILSSNDQEFQDECIALLGLGSDQDLTEGAVRSCIGEKMNRIVEMNDTKENVEHNAPYLFECERFDEDYSLLDEDDPDEDMIFDF*