Gene Details:
- MSU gene ID: LOC_Os06g49080
- RAPdb gene ID: Os06g0704300
- Gene Symbol: LIC OsLIC1 OsLIC OsFLA6
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Suppression of endogenous OsLIC expression resulted in drastically increased leaf and tiller angles, shortened shoot height, and consequently reduced grain production in rice.
- Here, we demonstrate that Oryza sativa LEAF and TILLER ANGLE INCREASED CONTROLLER (LIC) acts as an antagonistic transcription factor of BRASSINAZOLE-RESISTANT 1 (BZR1) to attenuate the BR signaling pathway.
- OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling.
- Quantitative PCR revealed LIC transcription rapidly induced by BR treatment.
- Image analysis and immunoblotting showed that upon BR treatment LIC proteins translocate from the cytoplasm to the nucleus in a phosphorylation-dependent fashion.
- Molecular and physiology assays revealed that LIC plays a dominant role at high BR levels, whereas BZR1 is dominant at low levels.
- Here we describe a novel CCCH-type zinc finger gene, OsLIC (Oraza sativaleaf and tiller angle increased controller), which is involved in the regulation of rice plant architecture.
- OsLIC may be a transcription activator to control rice plant architecture.
- OsLIC is predominantly expressed in rice collar and tiller bud.
- The gain-of-function mutant LIC-1 and LIC-overexpressing lines showed erect leaves, similar to BZR1-depleted lines, which indicates the opposite roles of LIC and BZR1 in regulating leaf bending.
- LIC directly regulated target genes such as INCREASED LEAF INCLINATION 1 (ILI1) to oppose the action of BZR1.
- Thus, LIC regulates rice leaf bending as an antagonistic transcription factor of BZR1.
- Dynamics of brassinosteroid response modulated by negative regulator LIC in rice.
- The phenotypes of LIC-1 and LIC-overexpressing lines in erect leaves contribute to ideal plant architecture.
- OsRELA Regulates Leaf Inclination by Repressing the Transcriptional Activity of OsLIC in Rice.
- Therefore, our results suggest that OsRELA can act as a transcriptional regulator and is involved in the regulation of leaf inclination by regulating the transcriptional activity of OsLIC.
- OsMAPK6 phosphorylates a zinc finger protein OsLIC to promote downstream OsWRKY30 for rice resistance to bacterial blight and leaf streak.
- Rice OsLIC encoding a CCCH zinc finger transcription factor plays an important role in immunity.
- Genetic assays confirmed that the osilc knockout mutants and OsWRKY30-overexpressing plants exhibited enhanced resistance to Xoo and Xoc, knocking out OsWRKY30 in the OsLIC mutants attenuated the resistance against bacterial pathogens.
- OsMAPK6 physically interacted with and phosphorylated OsLIC leading to decreased OsLIC DNA-binding activity, therefore, overexpression of OsLIC partially suppressed OsMAPK6-mediated rice resistance.
- Collectively, these results reveal that OsMAPK6-mediated phosphorylation of OsLIC positively regulates rice resistance to Xoo and Xoc by modulating OsWRKY30 transcription, suggesting that OsMAPK6-OsLIC-OsWRKY30 module is an immune signaling pathway in response to the bacterial pathogens.
Function-related keywords:
- height , grain , tiller , tiller-angle , brassinosteroid , BR , architecture , shoot , leaf , resistant , BR-signaling , erect , transcription-factor , transcriptional-regulator , resistance , blight , bacterial-blight , immunity , R-protein , zinc , xoo , Xoo
Literature:
- Dynamics of brassinosteroid response modulated by negative regulator LIC in rice . DOI: 10.1371/journal.pgen.1002686 ; PMID: 22570626
- OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling . DOI: 10.1371/journal.pone.0003521 ; PMID: 18953406
- OsRELA Regulates Leaf Inclination by Repressing the Transcriptional Activity of OsLIC in Rice . DOI: 10.3389/fpls.2021.760041 ; PMID: 34659326
- OsMAPK6 phosphorylates a zinc finger protein OsLIC to promote downstream OsWRKY30 for rice resistance to bacterial blight and leaf streak . DOI: 10.1111/jipb.13249 ; PMID: 35293133
- An Analysis of Natural Variation Reveals That OsFLA2 Controls Flag Leaf Angle in Rice (Oryza sativa L.) . DOI: 10.3389/fpls.2022.906912 ; PMID: 35812967
Related News:
Gene Resources:
- NCBI ID: AK107008
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os06g49080.1
ACTACTCCGGCCGGCGGCCGCGTCTCGAGTTCTCGGCGGAGGCGGCAAGCCGGCGAGGGCAACCCACCCACCGACGTCGTGCGGCCGCGCTTGCTGCGTCGCGTGCCCACGCCAATCCCGTGGCGGCGGAAGGAGGAGGAGCAAGCGCTTGGGAGGAGCTAAACCCTAGAGGCGGAGCTCTAGAATCGAATCCCCCCCCTTCCTTCCGCTTTGCGGCGATGAGTCGGCGGCAGGAGATTTGCCGCAACTTCCAGCGCGGAAGTTGCAAGTACGGAGCGCAGTGCAGGTATTTGCATGCCTCCCCTCACCAGCAACAGCAGCAGCAGCAGGCGAAGCCCAACCCGTTTGGATTTGGCACCGGAAGCAGGCAGCAGCAGCAGCCGTCATTTGGCTCACAGTTCCAGCAGCAGCAACAGCAGCAGCAGAAGCCCAATCCTTTTGGTTTTGGGGTACAAGGTGCCAATGCCCAGTCACGTAATGCTCCTGGTCCTGCGAAGCCTTTTCAAAATAAGTGGGTAAGGGACCCCTCGGCCCCGACGAAGCAAACAGAGGCGGTGCAGCCACCGCAGGCGCAGGCTGCCCACACCTCCTGTGAAGACCCTCAGTCATGCAGACAACAAATTTCTGAGGATTTTAAGAACGAGGCTCCTATTTGGAAGCTTACTTGTTATGCTCATCTCAGAAATGGCCCTTGCAATATTAAGGGAGACATTAGCTTCGAGGAACTAAGAGCTAAAGCCTATGAGGAAGGAAAGCAAGGGCATTCTCTGCAATCAATAGTTGAGGGAGAAAGAAATCTACAAAACGCAAAGTTAATGGAGTTTACTAATCTGCTCAATAGTGCACGTCCATCACAAACTCCAAGCTTTCCTACTATGAGTTCCTTCCCTGAAGTGAAAAACAACTCATCATTCGGGGCTTCTCAAACCAATGGACCACCTGTGTTCAGTAGTTTCAGTCAAATTGGAGCAGCAACTAATATTGGACCTGGGCCAGGAACCACCGCACCAGGAATGCCAGCCAGTAGTCCTTTTGGTCATCCAAGCTCTGCACCACTTGCTGCCCCTACTTTTGGCAGTTCTCAAATGAAGTTTGGAGTTTCGAGCGTATTTGGAAACCAGGGTTCAGGTCAACCATTTGGGAGCTTTCAAGCCCCACGTTTTCCCAGTTCGAAGTCTCCTGCTTCCTCTGTCCAGCACAGAGACATTGATAGGCAATCACAAGAGTTGCTTAATGGGATGGTAACTCCTCCTAGTGTGATGTTTGAGGAATCTGTTGGGAACAACAAAAATGAAAATCAGGATGATAGCATCTGGTTGAAGGAAAAATGGGCAATTGGGGAGATACCGCTGGATGAACCACCTCAGAGGCACGTTAGCCATGTGTTTTAAGAACTCAAAGGTGTTTTTTTTTGTGTTGTTGAGGCATGAGACCATGAACTACTCAGCTATGATCTGACTTCCTTGTAGTTGGGTTGCCACCATATGTCGTACTTTTCTTGCCCGAGCTTCATGACGATACAAAGGAATTATACAACAAACAAGAGAATTTGCAAGAGTGAACAGTGAAGGAAGGCTGATGAACCAATGCATTGTTTGGTACCACTTATTTATTCCTGGAACATGAATGTGGGCAACTAGAGCTAACAACCAGCTAACTGCAGTCTTGCCTGTCGAGTTAGTATGTTTTTCTCTCTTTTTTTTAATCTGTAATTGTTTATTCCAATAGTATGTTTTTCTTTTTTTTTAATCTGTAATTGTTTATTCCAAAACTTGTTAGGAAGTTATTGGAATAAGAAACAGTATTGCAATATTGAGTGATTGGCCGGGTAACA
CDS Sequence
- >LOC_Os06g49080.1
ATGAGTCGGCGGCAGGAGATTTGCCGCAACTTCCAGCGCGGAAGTTGCAAGTACGGAGCGCAGTGCAGGTATTTGCATGCCTCCCCTCACCAGCAACAGCAGCAGCAGCAGGCGAAGCCCAACCCGTTTGGATTTGGCACCGGAAGCAGGCAGCAGCAGCAGCCGTCATTTGGCTCACAGTTCCAGCAGCAGCAACAGCAGCAGCAGAAGCCCAATCCTTTTGGTTTTGGGGTACAAGGTGCCAATGCCCAGTCACGTAATGCTCCTGGTCCTGCGAAGCCTTTTCAAAATAAGTGGGTAAGGGACCCCTCGGCCCCGACGAAGCAAACAGAGGCGGTGCAGCCACCGCAGGCGCAGGCTGCCCACACCTCCTGTGAAGACCCTCAGTCATGCAGACAACAAATTTCTGAGGATTTTAAGAACGAGGCTCCTATTTGGAAGCTTACTTGTTATGCTCATCTCAGAAATGGCCCTTGCAATATTAAGGGAGACATTAGCTTCGAGGAACTAAGAGCTAAAGCCTATGAGGAAGGAAAGCAAGGGCATTCTCTGCAATCAATAGTTGAGGGAGAAAGAAATCTACAAAACGCAAAGTTAATGGAGTTTACTAATCTGCTCAATAGTGCACGTCCATCACAAACTCCAAGCTTTCCTACTATGAGTTCCTTCCCTGAAGTGAAAAACAACTCATCATTCGGGGCTTCTCAAACCAATGGACCACCTGTGTTCAGTAGTTTCAGTCAAATTGGAGCAGCAACTAATATTGGACCTGGGCCAGGAACCACCGCACCAGGAATGCCAGCCAGTAGTCCTTTTGGTCATCCAAGCTCTGCACCACTTGCTGCCCCTACTTTTGGCAGTTCTCAAATGAAGTTTGGAGTTTCGAGCGTATTTGGAAACCAGGGTTCAGGTCAACCATTTGGGAGCTTTCAAGCCCCACGTTTTCCCAGTTCGAAGTCTCCTGCTTCCTCTGTCCAGCACAGAGACATTGATAGGCAATCACAAGAGTTGCTTAATGGGATGGTAACTCCTCCTAGTGTGATGTTTGAGGAATCTGTTGGGAACAACAAAAATGAAAATCAGGATGATAGCATCTGGTTGAAGGAAAAATGGGCAATTGGGGAGATACCGCTGGATGAACCACCTCAGAGGCACGTTAGCCATGTGTTTTAA
Protein Sequence
- >LOC_Os06g49080.1
MSRRQEICRNFQRGSCKYGAQCRYLHASPHQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQFQQQQQQQQKPNPFGFGVQGANAQSRNAPGPAKPFQNKWVRDPSAPTKQTEAVQPPQAQAAHTSCEDPQSCRQQISEDFKNEAPIWKLTCYAHLRNGPCNIKGDISFEELRAKAYEEGKQGHSLQSIVEGERNLQNAKLMEFTNLLNSARPSQTPSFPTMSSFPEVKNNSSFGASQTNGPPVFSSFSQIGAATNIGPGPGTTAPGMPASSPFGHPSSAPLAAPTFGSSQMKFGVSSVFGNQGSGQPFGSFQAPRFPSSKSPASSVQHRDIDRQSQELLNGMVTPPSVMFEESVGNNKNENQDDSIWLKEKWAIGEIPLDEPPQRHVSHVF*