Information report for RAE3
Gene Details
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Functional Descriptions
- Identification of RAE3 sheds light on the molecular mechanism underlying awn development and provides an example of how selection on different genes can confer the same domestication phenotype in Asian and African rice.
- A 48-bp deletion may disrupt the substrate recognition domain in RAE3 and diminish awn elongation.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q0D9V5
- EMBL: AP008212, CM000143
- AlphaFoldDB: Q0D9V5
- KEGG: dosa:Os06g0695900, osa:4341939
- Orthologous matrix: WSHRASA
- InterPro: IPR001841, IPR013083
- PANTHER: PTHR46539, PTHR46539:SF2
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- OrthoDB: Q0D9V5
- Conserved Domain Database: cd16461
Homologs
- Arabidopsis thaliana: AT3G05200, AT2G42360, AT3G16720, AT2G42350, AT3G48030, AT4G15975
- Arachis hypogaea: arahy.Tifrunner.gnm1.ann1.WB8Z1Y, arahy.Tifrunner.gnm1.ann1.466F5F, arahy.Tifrunner.gnm1.ann1.WBD5UZ
- Brassica napus: BnaC07G0192700ZS
- Citrullus lanatus: Cla97C10G184660
- Lotus japonicus: Lj1g0003826
- Manihot esculenta: MANES_02G115400
- Poncirus trifoliata: Ptrif.0003s0432
- Solanum lycopersicum: Solyc00g007220.3
- Solanum tuberosum: PGSC0003DMG400023160
Sequences
cDNA Sequence
- >LOC_Os06g48065.1
GAGGTGGAGTACATCTAAAATCCCTCGTCTTGTCGCTGCTAAGCTTGCCGCCGATGGAGCCGTCGCGGCGGCTGCTGCTGTCCGACTACGACGGCGCGATCGTGTCGCCGCTGCCGTCGCCGCCGCCGTCGTCGGCCACGCCGTTCAGGCCGGGCGTCGCGGTGGTCGTGGGCATCCTGACGAGCGTGTTCTCCATCACGTTCCTGCTGCTGCTGTACGCGAAGCACTGCAAGCGGAACGCCGCGGAGTCGTCGGGCCCGTACGGGAGCGGCGGCGCGTTCGGGTCGTCCGGTGGGGGCGGGGCGGGCGAGCGGCGGAACTCCGGCGTCGACCGCGCCGTGGTGGAGTCGCTGCCGGTGTTCCGGTTCGGCGCGCTCCGTGGGCAGAAGGCTGGGCTCGAGTGCGCGGTGTGCCTCGGCCGGTTCGAGCCGACGGAGGCGCTCCGGCTGCTGCCGAAATGCCGCCATGGGTTCCACGTCGAGTGCGTGGATACGTGGCTGGACGCGCACTCGACGTGCCCGCTGTGCCGCTCCCGCGTCGACCCCGAGGACGTCCTGCTCCTCCCGGAGCCGCCAAAGCCGTCCACCACGGGGCCCCCTGATCCGCCGGAGACGAAGGTGGCGGCGGCGGCGGCGGCTGCTACGGCCAAGGACAAGGAGGCGAGCTTAGCTCCTGCTGCTCCTGCTCCGTCTCCAGCGTTTAGAGGCTTCTTCTCCGGCCGGCACTCGACGGGGTCGGTACGGGCGCCAGGGAGGGTTGGCCCTGCCTCACGCCGGTCGGCCGATCTCGTCGGAGGCGACGGCGGTGCGGTGGTGGGATGCTTCGAGGCCGCCAAGGTTCGCAAGGACAGGGTGCTGTTGATGGAGCCGGCGGCCGCGGTGGCGGAGCCTGACCCGGAAGCCTACGACCGGCGGTTCGGGCACCGCATCCTGGTGAGCACCGCCGGTGGCTGCGAGGACGAGACGGCACCGGCGGCGAAGCAGCGGTGGAGCGAGGTGCGACCATCCGATCTGATGTTCGTCCGGTCGGAGATGCTGGTGACGGAGGCCGGCCGGTACTCCTGCTCCGCCGCCGTCCACTCCGGCAACGGCAGGAGCGTAATCAGCGCGAGGAGCCTATCGGAGCTCGCCGGCGTGAGCCGGCTCCCTCCCATCCGCGCCAGCGGCGAGCCACGAGCCGGCGCGCGTCGGTGGCCGGGCTCGAGCTGGTGGGCCCGGGGCCCGCCCGCCCTTAACGGCCCTAGCACCTAGGCCGCTGTTCCGCGGGGCCCACTTCGCAGCCCGGAAAAAGGCTCCCAATTTTTTCTCTCCCCATACTGCCCCCGCCACTTCCACGTAAACCACGGCACCCTATGCCCGAACCCGTGGCTCACGTGATGGGCACCATGGTAATTACACGCAGCTGGGGCACAAGACTGCAAGATGAGTCCATGCCATGCCCGCCTCGGGAGCCGCGCCGCTAGAGAGAGATAAGATGGTGGTGGTGATGGTATGTTGCTTTCCGCGGGGATCTCGAGGCAAAGGTGCTGGTTTCTTCCTGAATTCGGGCGGCCTGGATCGATCGGCTACGGCCCGCATATGGCGCCGGCGAAGGCGTCGTAGCCCAATGCGCCGTGGATCTTCTGCGGCGCCGTGCGCTGACAAGGGCTTTTGGCGCGTCGCGTCGGCCGGGTCGGGGGACGAGGGAACCAGGCAACCAGCCCATGCTACACAAGAGAGAAAAAGAAAAAAAAAGCTGGTCGTATGCGTGTAAAATTCTTGTCTGTGTAAGAGGAAAAGCGCTGCAACTTTTTGGTGTAACCTGTTGCAAAGCATCTCCCGGGCAATGGCTCAGTTAGTAAAGCAGCTAAAGCCCATCTCGCATTTCTCATCTACTATCCTCTTGGTTTTTTTGTTGCGTCGTGTTGCTAGACTCGGTTCCGTTTTGCATTCTAGCGTAGTGGCAGTAGTACTATC
CDS Sequence
- >LOC_Os06g48065.1
ATGGAGCCGTCGCGGCGGCTGCTGCTGTCCGACTACGACGGCGCGATCGTGTCGCCGCTGCCGTCGCCGCCGCCGTCGTCGGCCACGCCGTTCAGGCCGGGCGTCGCGGTGGTCGTGGGCATCCTGACGAGCGTGTTCTCCATCACGTTCCTGCTGCTGCTGTACGCGAAGCACTGCAAGCGGAACGCCGCGGAGTCGTCGGGCCCGTACGGGAGCGGCGGCGCGTTCGGGTCGTCCGGTGGGGGCGGGGCGGGCGAGCGGCGGAACTCCGGCGTCGACCGCGCCGTGGTGGAGTCGCTGCCGGTGTTCCGGTTCGGCGCGCTCCGTGGGCAGAAGGCTGGGCTCGAGTGCGCGGTGTGCCTCGGCCGGTTCGAGCCGACGGAGGCGCTCCGGCTGCTGCCGAAATGCCGCCATGGGTTCCACGTCGAGTGCGTGGATACGTGGCTGGACGCGCACTCGACGTGCCCGCTGTGCCGCTCCCGCGTCGACCCCGAGGACGTCCTGCTCCTCCCGGAGCCGCCAAAGCCGTCCACCACGGGGCCCCCTGATCCGCCGGAGACGAAGGTGGCGGCGGCGGCGGCGGCTGCTACGGCCAAGGACAAGGAGGCGAGCTTAGCTCCTGCTGCTCCTGCTCCGTCTCCAGCGTTTAGAGGCTTCTTCTCCGGCCGGCACTCGACGGGGTCGGTACGGGCGCCAGGGAGGGTTGGCCCTGCCTCACGCCGGTCGGCCGATCTCGTCGGAGGCGACGGCGGTGCGGTGGTGGGATGCTTCGAGGCCGCCAAGGTTCGCAAGGACAGGGTGCTGTTGATGGAGCCGGCGGCCGCGGTGGCGGAGCCTGACCCGGAAGCCTACGACCGGCGGTTCGGGCACCGCATCCTGGTGAGCACCGCCGGTGGCTGCGAGGACGAGACGGCACCGGCGGCGAAGCAGCGGTGGAGCGAGGTGCGACCATCCGATCTGATGTTCGTCCGGTCGGAGATGCTGGTGACGGAGGCCGGCCGGTACTCCTGCTCCGCCGCCGTCCACTCCGGCAACGGCAGGAGCGTAATCAGCGCGAGGAGCCTATCGGAGCTCGCCGGCGTGAGCCGGCTCCCTCCCATCCGCGCCAGCGGCGAGCCACGAGCCGGCGCGCGTCGGTGGCCGGGCTCGAGCTGGTGGGCCCGGGGCCCGCCCGCCCTTAACGGCCCTAGCACCTAG
Protein Sequence
- >LOC_Os06g48065.1
MEPSRRLLLSDYDGAIVSPLPSPPPSSATPFRPGVAVVVGILTSVFSITFLLLLYAKHCKRNAAESSGPYGSGGAFGSSGGGGAGERRNSGVDRAVVESLPVFRFGALRGQKAGLECAVCLGRFEPTEALRLLPKCRHGFHVECVDTWLDAHSTCPLCRSRVDPEDVLLLPEPPKPSTTGPPDPPETKVAAAAAAATAKDKEASLAPAAPAPSPAFRGFFSGRHSTGSVRAPGRVGPASRRSADLVGGDGGAVVGCFEAAKVRKDRVLLMEPAAAVAEPDPEAYDRRFGHRILVSTAGGCEDETAPAAKQRWSEVRPSDLMFVRSEMLVTEAGRYSCSAAVHSGNGRSVISARSLSELAGVSRLPPIRASGEPRAGARRWPGSSWWARGPPALNGPST*