Gene Details:
- MSU gene ID: LOC_Os06g47270
- RAPdb gene ID: Os06g0687200
- Gene Symbol: OsDIRP1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsDIRP1 expression was induced by drought, high salinity, and abscisic acid (ABA) treatment, but not by low temperature (4
C) stress, suggesting that OsDIRP1 is differentially regulated by different abiotic stresses. - These results suggest that OsDIRP1 acts as a negative regulator during drought and salt stress, whereas it functions as a positive factor during the cold stress response in rice.
- In this study, we identified and characterized OsDIRP1 (Oryza sativa Drought-Induced RING Protein 1), a nuclear-localized putative RING E3 ubiquitin (Ub) ligase in rice (Oryza sativa L.
Function-related keywords:
- temperature , drought , salt , cold-stress , abiotic-stress , salt-stress , stress , biotic-stress , Ubiquitin , abscisic-acid , stress-response
Literature:
- OsDIRP1, a Putative RING E3 Ligase, Plays an Opposite Role in Drought and Cold Stress Responses as a Negative and Positive Factor, Respectively, in Rice (Oryza sativa L.) . DOI: 10.3389/fpls.2018.01797 ; PMID: 30568669
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g47270.1
AACCTATTTCCCTTTCCCGCCGCTGCTCTCACCGCGAACCCTACGCGCCGCCGCCGCCGCCGCCGCGGCTGCGCACGTCGAGCAGCCCGCGATGGAGAACGCCTGCGAGGCCGGCCTGCCGCTGTCGGTGGCCGTGTCGGTGCCGCCGGTGATGGTTGACGGGGAGACGGTTCCGAAGGAGGTGGAGGAGTGCGAGGACGAGGAGGAGGAGGAGGAGTACGCCGGGGATGCGCCGCCGCCGTGGAAGGTGATGGGTTCGGATGATGAGGGCGAGACGGAGGCCGGCGAGGAGGAGGAGATTGCCGAGGCCGACGGCGAGGAAGAGGCGGCGGACGTGGAGGAGGTCGAGTACGAGTTCTACGACAGCGACGGCAGCGAGGACGAGGGCGACGGCGAGGAGGTTGACCCGGCGGTGGCGAGCGCCGCGCAGTTCGTGCCGGAAGGGCAGTTTCTTGGGTCGGCGCAGTTCGCCGCCTACGGCTGCGCCGCCGGCTTCATGCGGGTCGCCGCCGTCGAGGCGGACCCGGCCGACGGCCAAGAGATCCTCGTGCTCTACCGCTACACCCTCCTCAAGAGGGCATGGAGCGATCCGGCGGGCGTGGAGCTGTCCATGTGGGCGAAGGTGTCGAAGATACACCGCCTCCGGTTCATCGTCCCGGCCTCCGGCGACCCGGCGAGCTCGCTGCCATTCGCCGGGCTATCTCTGTCCCCGCTGATCTACCACAACGACTACGTCGAGGAGCTCGAGACGCTGTGGTCCAAGCTGGCGGCGCAGGTGCGCGTCCCGCCGGTAGCCACGCGCGTCCAGGTGATCGTCGACGTGGGCATCCTCAGGGCGGGGGACAACACGCCGGAGCGCAGGGAGTACATGCGCGCCGAGCTGGAGGCCAAGAAGGAGATGCCATGGCCGGGGAAGCTCCTCGGCATGGAGCTGCACGTGCCGGAGCCGGTGGTGGCGGCGGCGGCGTCGTGCAAGAGGGACAGCAGCGAGGAGGTGTTCGACGACGCGCCAGCGCCGCCGGCGAAGCGGAGGAAGGTGTTCGACGCCGGGGAGGAGTGCCCCGTCTGCCTGGACGAGCTCGAGGACGGCGTCGTGGCGTGGCCTGGGTGCTCTGTCGCCCATGTCTTCCATGGCCAATGCTTGGAGACAACTCTCAAGGGGAGCCAGATGTGCCCTATCTGCAGGCGTGATCTTGGCCTGAAAACCTTGCAGGAGTAGACTGATGTTGCAGACTTGCATTTGAAACAGAATGAATGAATGAATTGTAGGTTGTAGTAGCAGATTGATTGTTCTGCAGTTGTAGCCTTCAATTCGATCGATTTCTTGTGTGAATCTGGAGCATTCTTCAGAGTTCATACACATGGTTCACTGTAAAATTTGTTCCATGGATTATACTATATATGTTGTTTCTGTTCTGTTCGATGCTAAGTATAAGCAATCCATTGTAATA
CDS Sequence
- >LOC_Os06g47270.1
ATGGAGAACGCCTGCGAGGCCGGCCTGCCGCTGTCGGTGGCCGTGTCGGTGCCGCCGGTGATGGTTGACGGGGAGACGGTTCCGAAGGAGGTGGAGGAGTGCGAGGACGAGGAGGAGGAGGAGGAGTACGCCGGGGATGCGCCGCCGCCGTGGAAGGTGATGGGTTCGGATGATGAGGGCGAGACGGAGGCCGGCGAGGAGGAGGAGATTGCCGAGGCCGACGGCGAGGAAGAGGCGGCGGACGTGGAGGAGGTCGAGTACGAGTTCTACGACAGCGACGGCAGCGAGGACGAGGGCGACGGCGAGGAGGTTGACCCGGCGGTGGCGAGCGCCGCGCAGTTCGTGCCGGAAGGGCAGTTTCTTGGGTCGGCGCAGTTCGCCGCCTACGGCTGCGCCGCCGGCTTCATGCGGGTCGCCGCCGTCGAGGCGGACCCGGCCGACGGCCAAGAGATCCTCGTGCTCTACCGCTACACCCTCCTCAAGAGGGCATGGAGCGATCCGGCGGGCGTGGAGCTGTCCATGTGGGCGAAGGTGTCGAAGATACACCGCCTCCGGTTCATCGTCCCGGCCTCCGGCGACCCGGCGAGCTCGCTGCCATTCGCCGGGCTATCTCTGTCCCCGCTGATCTACCACAACGACTACGTCGAGGAGCTCGAGACGCTGTGGTCCAAGCTGGCGGCGCAGGTGCGCGTCCCGCCGGTAGCCACGCGCGTCCAGGTGATCGTCGACGTGGGCATCCTCAGGGCGGGGGACAACACGCCGGAGCGCAGGGAGTACATGCGCGCCGAGCTGGAGGCCAAGAAGGAGATGCCATGGCCGGGGAAGCTCCTCGGCATGGAGCTGCACGTGCCGGAGCCGGTGGTGGCGGCGGCGGCGTCGTGCAAGAGGGACAGCAGCGAGGAGGTGTTCGACGACGCGCCAGCGCCGCCGGCGAAGCGGAGGAAGGTGTTCGACGCCGGGGAGGAGTGCCCCGTCTGCCTGGACGAGCTCGAGGACGGCGTCGTGGCGTGGCCTGGGTGCTCTGTCGCCCATGTCTTCCATGGCCAATGCTTGGAGACAACTCTCAAGGGGAGCCAGATGTGCCCTATCTGCAGGCGTGATCTTGGCCTGAAAACCTTGCAGGAGTAG
Protein Sequence
- >LOC_Os06g47270.1
MENACEAGLPLSVAVSVPPVMVDGETVPKEVEECEDEEEEEEYAGDAPPPWKVMGSDDEGETEAGEEEEIAEADGEEEAADVEEVEYEFYDSDGSEDEGDGEEVDPAVASAAQFVPEGQFLGSAQFAAYGCAAGFMRVAAVEADPADGQEILVLYRYTLLKRAWSDPAGVELSMWAKVSKIHRLRFIVPASGDPASSLPFAGLSLSPLIYHNDYVEELETLWSKLAAQVRVPPVATRVQVIVDVGILRAGDNTPERREYMRAELEAKKEMPWPGKLLGMELHVPEPVVAAAASCKRDSSEEVFDDAPAPPAKRRKVFDAGEECPVCLDELEDGVVAWPGCSVAHVFHGQCLETTLKGSQMCPICRRDLGLKTLQE*