Gene Details:
- MSU gene ID: LOC_Os06g45980
- RAPdb gene ID: Os06g0671700
- Gene Symbol: TWINKLE
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- We found that TA1/OsmtSSB1 interacts with mitochondrial DNA recombinase RECA3 and DNA helicase TWINKLE, and downregulation of RECA3 or TWINKLE also leads to ta1-like phenotypes.
Function-related keywords:
Literature:
- Defective mitochondrial function by mutation in THICK ALEURONE 1 encoding a mitochondrion-targeted single-stranded DNA-binding protein leads to increased aleurone cell layers and improved nutrition in rice . DOI: 10.1016/j.molp.2021.05.016 ; PMID: 34015460
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g45980.1
AAACCCTAAACCTCCGCGACCCAATCCAAACTCCATCCTCTCCTCCCTCCTCCTTCTTCTTCTTCTTCTTCCCCAAGCCCCTCTCCCCTCCCCTCTCGCCTCCTCTGCTCCGCGCCCCGCATGCCCCGCGCGGCGAAACCCTAGACCTCGTGATGCCACCGCGCCCCTCCCTCCAGTCGCTCCTCCTCATGGCCGCCTCCGCTGCCGCCGGCGGGGACTCCGGCCTCCTCCTCGCCGCGCGCCGCCGCCTCCCCGCCGCCGCCCTCGCCGCGGGGGGCCACCGTATCCGGCTGCTCCACGCCTTCTCCGCCGCGAGCCGGCGGGGGAGGCACGAGGTGGCCTGCTGCGTCAGGACTGAACCCGCGCCGCGGCCCGCCAGCCCCGTCGCCGTTCGCTCCAGGAGTGTTCATTCAACGGAAAACTACAAAAAGGGTTGCGAGCAGCGACTAGGACAGTTAATTGAGAGACTGAAGAAAGAAGGAATAAGTCCAAAGCAATGGAGGCTTGGTACTTATCAACGAATGATGTGCCCAAAGTGCAATGGGGGATCTACTGAGGAGCCGAGCCTCAGTGTTATGATCCGAATGGATGGGAAAAATGCTGCATGGCAATGTTTTAGAGCTAATTGTGGTTGGAAGGGTTTTGTCGAGCCTGATGGAGTTCTCAAACTATCACAAGCAAAAAATAATACAGAATGTGAAACGGACCAGGATGGTGAAGCTAATCTGGCAGTCAATAAGGTTTACAGAAAAATTTGTGAGGAGGACCTCCATCTTGAGCCACTTTGCGATGAGCTTGTAACATACTTCTCAGAGAGAATGATATCGCCAGAAACACTTCGGAGAAACAGCGTAATGCAGCGTAACTGGAGTAATAAGATAGTTATTGCTTTCACCTACAGGCGTGATGGGGTCCTCGTTGGCTGCAAATACAGGGAAGTCTCTAAGAAATTTTCACAGGAAGCAAACACAGAGAAAATTTTATATGGTCTGGACGATATAAAGCGAGCACGAGATATTATCATTGTTGAGGGTGAAATTGATAAGCTCTCAATGGAAGAAGCTGGCTACCGTAATTGTGTCAGTGTACCAGATGGTGCACCACCGAAAGTATCCAGCAAGCTCCCAGATAAAGATCAGGATAAGAAGTACCAATATCTGTGGAATTGCAAAGAATATCTTGACCCGGCGTCTAGGATAATACTGGCAACAGATGCTGATCCTCCAGGGCAGGCTCTGGCTGAGGAACTTGCTCGTCGTCTTGGTAAAGAAAGATGCTGGAGGGTCAATTGGCCAAAGAAGAACGAGAACGAAATTTGCAAAGACGCAAATGAGGTACTGATGTTTTTAGGACCACAAGCATTGAGAAAGGTTATAGAAGACGCGGAACTGTATCCCATAAGAGGTCTTTTCTCCTTCAAAGATTTCTTCCCTGAGATCGATAATTATTATCTTGGAATCCGTGGGGATGAGCTTGGTGTTCCTACTGGATGGAAATCCATGGATGAGCTTTACAAGGTTGTTCCTGGGGAGTTGACTGTAGTAACAGGAGTGCCGAATTCTGGTAAAAGTGAGTGGATTGATGCTTTACTGTGCAATATAAATGACCAGGTTGGGTGGAAATTCGTTCTGTGCTCAATGGAAAACAAGGTCAGGGAGCATGCTAGAAAGCTCTTAGAGAAGCGCATTAAGAAACCATTCTTTGATGCTAGATATGGGGGCTCTGCAGAAAGAATGAGTCTAGACGAATTTGAAGAAGGCAAGCAATGGCTGAATGAAACATTCCATCTGATCCGGTGTGAAGATGATTGCCTTCCATCTGTTAATTGGGTTCTCGAGCTTGCTAAAGCTGCAGTTCTAAGATATGGAGTGCGTGGTCTTGTGATTGATCCCTACAATGAACTTGATCACCAACGCCCCTCAAATCAAACCGAAACAGAATATGTCAGTCAGATGCTTACCAAGATTAAGCGGTTTGCTCAGCACCATTCTTGTCATGTTTGGTTTGTTGCCCACCCTAGACAGCTTCATAACTGGAATGGTGGTCCTCCTAATATGTATGACATCAGTGGAAGCGCACATTTCATAAACAAATGTGATAATGGAATTGTCATCCATCGAAACAGGGATCCAAACAGTGGCCCACTTGATGTTGTGCAGGTTTGTGTGAGGAAGGTGCGCAACAAAGTGATTGGACAAATAGGAGATGCTTTCTTGTCATATGAACGGGTTAGTGGTGAGTTCAGGGATGCTGATAAAGATACTGCAAAGAAGGCTGCTGTTGCAGCCGCTAATGTAGCAAAAGCCCCACAGAGGAAAGGATAGATCCGCTGATTTGATTTACTCACTCACTGACCGATCGCACAAGGTGGAGCGATATTGTTCTTGATGCTGCACACTACTGGAGACCGTGGCCAACTTCATATGCTGGAGCTGACTGGTCAGTATTTTTTTTGCGACAAGACCCTTTGGAGGTCACCTGTCTGCTGCAGAATTTGGTGGGAAGATGGTTAACCTTGTTACATGGCCTACAAGACATTATTTGGGCGATGTATATCAAAGCATCAATTGTAGTTAATTTTACACCAGGTGCTATGAACATATTGGTGGATTCTATCAGTAGGGAAACTTCATCAGATTATTATGTACTATGCCCTTCCAAAAGTTGTAGTTGCTGGAAGGGCGTTTATTAATCCATCAGATGTATTTATTCCAGGCTTCCACATCTATGATCAGAATCTAATGATTTTTTATTACCCAAA
CDS Sequence
- >LOC_Os06g45980.1
ATGCCACCGCGCCCCTCCCTCCAGTCGCTCCTCCTCATGGCCGCCTCCGCTGCCGCCGGCGGGGACTCCGGCCTCCTCCTCGCCGCGCGCCGCCGCCTCCCCGCCGCCGCCCTCGCCGCGGGGGGCCACCGTATCCGGCTGCTCCACGCCTTCTCCGCCGCGAGCCGGCGGGGGAGGCACGAGGTGGCCTGCTGCGTCAGGACTGAACCCGCGCCGCGGCCCGCCAGCCCCGTCGCCGTTCGCTCCAGGAGTGTTCATTCAACGGAAAACTACAAAAAGGGTTGCGAGCAGCGACTAGGACAGTTAATTGAGAGACTGAAGAAAGAAGGAATAAGTCCAAAGCAATGGAGGCTTGGTACTTATCAACGAATGATGTGCCCAAAGTGCAATGGGGGATCTACTGAGGAGCCGAGCCTCAGTGTTATGATCCGAATGGATGGGAAAAATGCTGCATGGCAATGTTTTAGAGCTAATTGTGGTTGGAAGGGTTTTGTCGAGCCTGATGGAGTTCTCAAACTATCACAAGCAAAAAATAATACAGAATGTGAAACGGACCAGGATGGTGAAGCTAATCTGGCAGTCAATAAGGTTTACAGAAAAATTTGTGAGGAGGACCTCCATCTTGAGCCACTTTGCGATGAGCTTGTAACATACTTCTCAGAGAGAATGATATCGCCAGAAACACTTCGGAGAAACAGCGTAATGCAGCGTAACTGGAGTAATAAGATAGTTATTGCTTTCACCTACAGGCGTGATGGGGTCCTCGTTGGCTGCAAATACAGGGAAGTCTCTAAGAAATTTTCACAGGAAGCAAACACAGAGAAAATTTTATATGGTCTGGACGATATAAAGCGAGCACGAGATATTATCATTGTTGAGGGTGAAATTGATAAGCTCTCAATGGAAGAAGCTGGCTACCGTAATTGTGTCAGTGTACCAGATGGTGCACCACCGAAAGTATCCAGCAAGCTCCCAGATAAAGATCAGGATAAGAAGTACCAATATCTGTGGAATTGCAAAGAATATCTTGACCCGGCGTCTAGGATAATACTGGCAACAGATGCTGATCCTCCAGGGCAGGCTCTGGCTGAGGAACTTGCTCGTCGTCTTGGTAAAGAAAGATGCTGGAGGGTCAATTGGCCAAAGAAGAACGAGAACGAAATTTGCAAAGACGCAAATGAGGTACTGATGTTTTTAGGACCACAAGCATTGAGAAAGGTTATAGAAGACGCGGAACTGTATCCCATAAGAGGTCTTTTCTCCTTCAAAGATTTCTTCCCTGAGATCGATAATTATTATCTTGGAATCCGTGGGGATGAGCTTGGTGTTCCTACTGGATGGAAATCCATGGATGAGCTTTACAAGGTTGTTCCTGGGGAGTTGACTGTAGTAACAGGAGTGCCGAATTCTGGTAAAAGTGAGTGGATTGATGCTTTACTGTGCAATATAAATGACCAGGTTGGGTGGAAATTCGTTCTGTGCTCAATGGAAAACAAGGTCAGGGAGCATGCTAGAAAGCTCTTAGAGAAGCGCATTAAGAAACCATTCTTTGATGCTAGATATGGGGGCTCTGCAGAAAGAATGAGTCTAGACGAATTTGAAGAAGGCAAGCAATGGCTGAATGAAACATTCCATCTGATCCGGTGTGAAGATGATTGCCTTCCATCTGTTAATTGGGTTCTCGAGCTTGCTAAAGCTGCAGTTCTAAGATATGGAGTGCGTGGTCTTGTGATTGATCCCTACAATGAACTTGATCACCAACGCCCCTCAAATCAAACCGAAACAGAATATGTCAGTCAGATGCTTACCAAGATTAAGCGGTTTGCTCAGCACCATTCTTGTCATGTTTGGTTTGTTGCCCACCCTAGACAGCTTCATAACTGGAATGGTGGTCCTCCTAATATGTATGACATCAGTGGAAGCGCACATTTCATAAACAAATGTGATAATGGAATTGTCATCCATCGAAACAGGGATCCAAACAGTGGCCCACTTGATGTTGTGCAGGTTTGTGTGAGGAAGGTGCGCAACAAAGTGATTGGACAAATAGGAGATGCTTTCTTGTCATATGAACGGGTTAGTGGTGAGTTCAGGGATGCTGATAAAGATACTGCAAAGAAGGCTGCTGTTGCAGCCGCTAATGTAGCAAAAGCCCCACAGAGGAAAGGATAG
Protein Sequence
- >LOC_Os06g45980.1
MPPRPSLQSLLLMAASAAAGGDSGLLLAARRRLPAAALAAGGHRIRLLHAFSAASRRGRHEVACCVRTEPAPRPASPVAVRSRSVHSTENYKKGCEQRLGQLIERLKKEGISPKQWRLGTYQRMMCPKCNGGSTEEPSLSVMIRMDGKNAAWQCFRANCGWKGFVEPDGVLKLSQAKNNTECETDQDGEANLAVNKVYRKICEEDLHLEPLCDELVTYFSERMISPETLRRNSVMQRNWSNKIVIAFTYRRDGVLVGCKYREVSKKFSQEANTEKILYGLDDIKRARDIIIVEGEIDKLSMEEAGYRNCVSVPDGAPPKVSSKLPDKDQDKKYQYLWNCKEYLDPASRIILATDADPPGQALAEELARRLGKERCWRVNWPKKNENEICKDANEVLMFLGPQALRKVIEDAELYPIRGLFSFKDFFPEIDNYYLGIRGDELGVPTGWKSMDELYKVVPGELTVVTGVPNSGKSEWIDALLCNINDQVGWKFVLCSMENKVREHARKLLEKRIKKPFFDARYGGSAERMSLDEFEEGKQWLNETFHLIRCEDDCLPSVNWVLELAKAAVLRYGVRGLVIDPYNELDHQRPSNQTETEYVSQMLTKIKRFAQHHSCHVWFVAHPRQLHNWNGGPPNMYDISGSAHFINKCDNGIVIHRNRDPNSGPLDVVQVCVRKVRNKVIGQIGDAFLSYERVSGEFRDADKDTAKKAAVAAANVAKAPQRKG*