Gene Details:
- MSU gene ID: LOC_Os06g44840
- RAPdb gene ID: Os06g0658900
- Gene Symbol: OsHGGT HGGT SGD1 RTD1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- cDNAs encoding homogentisic acid geranylgeranyl transferase (HGGT), which catalyzes the committed step of tocotrienol biosynthesis, were isolated from barley, wheat and rice seeds.
- Overexpression of the barley HGGT in corn seeds resulted in an increase in tocotrienol and tocopherol content of as much as six-fold.
- Our results indicate that SGD1 is essential for plant development and cold tolerance in rice.
- A map-based cloning strategy and subsequent complementation test showed that SGD1 encodes homogentisate phytyltransferase (HPT), a key enzyme in tocopherol biosynthesis.
- The RTD1 mutant showed overall growth retardation throughout the growth period.
- The cold-related C-repeat-binding factor (CBF)/dehydration-responsive element-binding protein 1 (DREB1) genes were significantly upregulated in RTD1 under natural growth conditions.
- RTD1 encodes a homogentisate phytyltransferase catalyzing a key step in rice tocopherol biosynthesis, confers cold tolerance and regulates rice development by affecting the accumulation of DELLA protein SLENDER RICE1.
- Map-based cloning revealed that the RTD1 gene encoded a homogentisate phytyltransferase, a key enzyme catalyzing the committed step in tocopherol biosynthesis.
- Cold tolerance was found to be reduced in RTD1.
- Moreover, RTD1 exhibited a reduced response to gibberellin (GA).
- Therefore, it appears that the antioxidant potential of transgenic oil-producing plants such as soybean, sunflower, and corn may be enhanced by overexpressing OsHGGT during seed germination.
Function-related keywords:
- seed , development , map-based-cloning , tolerance , cold-tolerance , plant-development , growth , gibberellin , Gibberellin , seed-germination
Literature:
- Metabolic redesign of vitamin E biosynthesis in plants for tocotrienol production and increased antioxidant content . DOI: 10.1038/nbt853 ; PMID: 12897790
- SGD1, a key enzyme in tocopherol biosynthesis, is essential for plant development and cold tolerance in rice . DOI: 10.1016/j.plantsci.2017.04.008 ; PMID: 28554480
- Rice tocopherol deficiency 1 encodes a homogentisate phytyltransferase essential for tocopherol biosynthesis and plant development in rice . DOI: 10.1007/s00299-018-2266-9 ; PMID: 29427065
- Antioxidant activity and inhibition of lipid peroxidation in germinating seeds of transgenic soybean expressing OsHGGT . DOI: 10.1021/jf104012z ; PMID: 21175184
Related News:
Gene Resources:
- NCBI ID: AX046728
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os06g44840.1
AAAATTTCTGAAGAGCGAGAGCCAAGAGGCCAACAGTGCTTTGCACTCCGCAGTGTTGGACTGCACAAAGCGCCGCCTCGCTATCCGACGAGCGCCACCTCCTCTTCTCCTGCAGCGTCCACGCCTCCCTCCCTCACGCCTCGCCTCGCCTCGCCCGCCCACTCACTCCACTCCCCCCCGCAGCCGCCGCGCGCGCCCGGCCGCCGCGGTGGTGGCGGCGGCGGCGATGGATTCGCTGCGCCTCCGGCCGTCGCTCCTCGCCGCGCGGGCCCCCGGCGCGGCCTCGCTGCCGCCTCTCCGGCGAGATCACTTTCTACCACCTTTATGTTCTATCCATAGAAATGGTAAACGGCCAGTTTCTTTGTCCAGCCAAAGGACCCAAGGTCCTTCCTTCGATCAATGTCAGAAATTCTTTGGTTGGAAATCCTCCCACCACAGGATACCACATCGACCAACATCTAGTTCCGCTGACGCTTCGGGACAACCTCTACAATCTTCAGCTGAAGCACATGATTCATCAAGTATATGGAAGCCAATATCATCTTCTCTGGATGCATTTTACAGGTTTTCTCGGCCACATACTGTCATAGGAACAGCACTTAGCATAGTCTCAGTTTCGCTGCTAGCTGTTGAGAATTTGTCCGATGTGTCTCCCTTGTTCCTCACTGGTTTGCTGGAGGCAGTGGTAGCAGCTCTTTTCATGAACATCTATATCGTTGGATTGAATCAGTTGTTCGACATTGAGATAGATAAGGTTAACAAGCCAACTCTTCCATTAGCATCTGGGGAATATTCTCCTGCAACTGGAGTTGCACTTGTATCAGCCTTCGCTGCTATGAGCTTTGGCCTTGGATGGGCTGTTGGATCACAGCCTCTGTTCCTGGCTCTTTTCATTAGCTTTATTCTTGGAACAGCATATTCGATTAATCTGCCATTCCTGAGATGGAAGAGATCTGCTGTTGTTGCAGCACTTTGCATATTAGCAGTCCGTGCAGTGATTGTTCAGCTGGCATTTTTTCTCCACATTCAGACATTCGTATTCAGAAGACCAGCAGTCTTTACCAGGCCATTGATTTTTGCAACTGCATTCATGACCTTTTTCTCCGTTGTAATAGCATTGTTCAAGGATATACCTGATATTGAAGGAGACCGTATTTTTGGTATCAAATCTTTCAGTGTTCGATTAGGTCAAAAGAAGGTTTTCTGGATTTGTGTTGGTCTGCTCGAGATGGCTTATTGTGTTGCAATATTGATGGGAGCTACTTCTGCCTGTTTGTGGAGCAAATACGCAACTGTGGTGGGACATGCAATCCTTGCGGCAATCCTATGGAACCGCTCACGGTCGATTGATCTGACAAGCAAAACTGCAATCACTTCTTTCTACATGTTTATCTGGAAGCTGTTCTACGCGGAATACCTTCTCATTCCTCTTGTAAGGTGACAAAGGCGATTACTCCAGGGACGCAGGTAGATTGGAATTGGATCATGGCTGGATGGATGAACGGACGGCGCCCCATAAAATCACCTGCAAATCACCCGGTACACATGTTGACATCCTGCATCCAGATATGATATTGATAGATCATCGTCGGCACCATCATTCCTCTGAAAGATTTCGCACGGCATTTCAACCTCCAACTCCCAACGTACCCCAAAAAAAGTAACTAGGCCAGGTGAGCATCTGCTAGCCTATAGTAGACGTTATTGGAACAGTGGTAGTACTTGTTAGCAGCAGTAATAATAATCATCATAATAAAGCTCTGGGTTACTGTCCGCTCAG - >LOC_Os06g44840.2
AAAATTTCTGAAGAGCGAGAGCCAAGAGGCCAACAGTGCTTTGCACTCCGCAGTGTTGGACTGCACAAAGCGCCGCCTCGCTATCCGACGAGCGCCACCTCCTCTTCTCCTGCAGCGTCCACGCCTCCCTCCCTCACGCCTCGCCTCGCCTCGCCCGCCCACTCACTCCACTCCCCCCCGCAGCCGCCGCGCGCGCCCGGCCGCCGCGGTGGTGGCGGCGGCGGCGATGGATTCGCTGCGCCTCCGGCCGTCGCTCCTCGCCGCGCGGGCCCCCGGCGCGGCCTCGCTGCCGCCTCTCCGGCGAGATCACTTTCTACCACCTTTATGTTCTATCCATAGAAATGGTAAACGGCCAGTTTCTTTGTCCAGCCAAAGGACCCAAGGTCCTTCCTTCGATCAATGTCAGAAATTCTTTGGTTGGAAATCCTCCCACCACAGGATACCACATCGACCAACATCTAGTTCCGCTGACGCTTCGGGACAACCTCTACAATCTTCAGCTGAAGCACATGATTCATCAAGTATATGGAAGCCAATATCATCTTCTCTGGATGCATTTTACAGGTTTTCTCGGCCACATACTGTCATAGGAACAGCACTTAGCATAGTCTCAGTTTCGCTGCTAGCTGTTGAGAATTTGTCCGATGTGTCTCCCTTGTTCCTCACTGGTTTGCTGGAGGCAGTGGTAGCAGCTCTTTTCATGAACATCTATATCGTTGGATTGAATCAGTTGTTCGACATTGAGATAGATAAGGTTAACAAGCCAACTCTTCCATTAGCATCTGGGGAATATTCTCCTGCAACTGGAGTTGCACTTGTATCAGCCTTCGCTGCTATGAGCTTTGGCCTTGGATGGGCTGTTGGATCACAGCCTCTGTTCCTGGCTCTTTTCATTAGCTTTATTCTTGGAACAGCATATTCGATTAATCTGCCATTCCTGAGATGGAAGAGATCTGCTGTTGTTGCAGCACTTTGCATATTAGCAGTCCGTGCAGTGATTGTTCAGCTGGCATTTTTTCTCCACATTCAGACATTCGTATTCAGAAGACCAGCAGTCTTTACCAGGCCATTGATTTTTGCAACTGCATTCATGACCTTTTTCTCCGTTGTAATAGCATTGTTCAAGGATATACCTGATATTGAAGGAGACCGTATTTTTGGTATCAAATCTTTCAGTGTTCGATTAGGTCAAAAGAAGGTTTTCTGGATTTGTGTTGGTCTGCTCGAGATGGCTTATTGTGTTGCAATATTGATGGGAGCTACTTCTGCCTGTTTGTGGAGCAAATACGCAACTGTGGTGGGACATGCAATCCTTGCGGCAATCCTATGGAACCGCTCACGGTCGATTGATCTGACAAGCAAAACTGCAATCACTTCTTTCTACATGTTTATCTGGAAGCTGTTCTACGCGGAATACCTTCTCATTCCTCTTGTAAGGTGACAAAGGCGATTACTCCAGGGACGCAGGTAGATTGGAATTGGATCATGGCTGGATGGATGAACGGACGGCGCCCCATAAAATCACCTGCAAATCACCCGGTACACATGTTGACATCCTGCATCCAGATATGATATTGATAGATCATCGTCGGCACCATCATTCCTCTGAAAGATTTCGCACGGCATTTCAACCTCCAACTCCCAACGTACCCCAAAAAAAGTAACTAGGCCAGGTGAGCATCTGCTAGCCTATAGTAGACGTTATTGGAACAGTGGTAGTACTTGTTAGCAGCAGTAATAATAATCATCATAATAAAGCTCTGGGTTACTGTCCGCTCAG
CDS Sequence
- >LOC_Os06g44840.1
ATGGATTCGCTGCGCCTCCGGCCGTCGCTCCTCGCCGCGCGGGCCCCCGGCGCGGCCTCGCTGCCGCCTCTCCGGCGAGATCACTTTCTACCACCTTTATGTTCTATCCATAGAAATGGTAAACGGCCAGTTTCTTTGTCCAGCCAAAGGACCCAAGGTCCTTCCTTCGATCAATGTCAGAAATTCTTTGGTTGGAAATCCTCCCACCACAGGATACCACATCGACCAACATCTAGTTCCGCTGACGCTTCGGGACAACCTCTACAATCTTCAGCTGAAGCACATGATTCATCAAGTATATGGAAGCCAATATCATCTTCTCTGGATGCATTTTACAGGTTTTCTCGGCCACATACTGTCATAGGAACAGCACTTAGCATAGTCTCAGTTTCGCTGCTAGCTGTTGAGAATTTGTCCGATGTGTCTCCCTTGTTCCTCACTGGTTTGCTGGAGGCAGTGGTAGCAGCTCTTTTCATGAACATCTATATCGTTGGATTGAATCAGTTGTTCGACATTGAGATAGATAAGGTTAACAAGCCAACTCTTCCATTAGCATCTGGGGAATATTCTCCTGCAACTGGAGTTGCACTTGTATCAGCCTTCGCTGCTATGAGCTTTGGCCTTGGATGGGCTGTTGGATCACAGCCTCTGTTCCTGGCTCTTTTCATTAGCTTTATTCTTGGAACAGCATATTCGATTAATCTGCCATTCCTGAGATGGAAGAGATCTGCTGTTGTTGCAGCACTTTGCATATTAGCAGTCCGTGCAGTGATTGTTCAGCTGGCATTTTTTCTCCACATTCAGACATTCGTATTCAGAAGACCAGCAGTCTTTACCAGGCCATTGATTTTTGCAACTGCATTCATGACCTTTTTCTCCGTTGTAATAGCATTGTTCAAGGATATACCTGATATTGAAGGAGACCGTATTTTTGGTATCAAATCTTTCAGTGTTCGATTAGGTCAAAAGAAGGTTTTCTGGATTTGTGTTGGTCTGCTCGAGATGGCTTATTGTGTTGCAATATTGATGGGAGCTACTTCTGCCTGTTTGTGGAGCAAATACGCAACTGTGGTGGGACATGCAATCCTTGCGGCAATCCTATGGAACCGCTCACGGTCGATTGATCTGACAAGCAAAACTGCAATCACTTCTTTCTACATGTTTATCTGGAAGCTGTTCTACGCGGAATACCTTCTCATTCCTCTTGTAAGGTGA - >LOC_Os06g44840.2
ATGGATTCGCTGCGCCTCCGGCCGTCGCTCCTCGCCGCGCGGGCCCCCGGCGCGGCCTCGCTGCCGCCTCTCCGGCGAGATCACTTTCTACCACCTTTATGTTCTATCCATAGAAATGGTAAACGGCCAGTTTCTTTGTCCAGCCAAAGGACCCAAGGTCCTTCCTTCGATCAATGTCAGAAATTCTTTGGTTGGAAATCCTCCCACCACAGGATACCACATCGACCAACATCTAGTTCCGCTGACGCTTCGGGACAACCTCTACAATCTTCAGCTGAAGCACATGATTCATCAAGTATATGGAAGCCAATATCATCTTCTCTGGATGCATTTTACAGGTTTTCTCGGCCACATACTGTCATAGGAACAGCACTTAGCATAGTCTCAGTTTCGCTGCTAGCTGTTGAGAATTTGTCCGATGTGTCTCCCTTGTTCCTCACTGGTTTGCTGGAGGCAGTGGTAGCAGCTCTTTTCATGAACATCTATATCGTTGGATTGAATCAGTTGTTCGACATTGAGATAGATAAGGTTAACAAGCCAACTCTTCCATTAGCATCTGGGGAATATTCTCCTGCAACTGGAGTTGCACTTGTATCAGCCTTCGCTGCTATGAGCTTTGGCCTTGGATGGGCTGTTGGATCACAGCCTCTGTTCCTGGCTCTTTTCATTAGCTTTATTCTTGGAACAGCATATTCGATTAATCTGCCATTCCTGAGATGGAAGAGATCTGCTGTTGTTGCAGCACTTTGCATATTAGCAGTCCGTGCAGTGATTGTTCAGCTGGCATTTTTTCTCCACATTCAGACATTCGTATTCAGAAGACCAGCAGTCTTTACCAGGCCATTGATTTTTGCAACTGCATTCATGACCTTTTTCTCCGTTGTAATAGCATTGTTCAAGGATATACCTGATATTGAAGGAGACCGTATTTTTGGTATCAAATCTTTCAGTGTTCGATTAGGTCAAAAGAAGGTTTTCTGGATTTGTGTTGGTCTGCTCGAGATGGCTTATTGTGTTGCAATATTGATGGGAGCTACTTCTGCCTGTTTGTGGAGCAAATACGCAACTGTGGTGGGACATGCAATCCTTGCGGCAATCCTATGGAACCGCTCACGGTCGATTGATCTGACAAGCAAAACTGCAATCACTTCTTTCTACATGTTTATCTGGAAGCTGTTCTACGCGGAATACCTTCTCATTCCTCTTGTAAGGTGA
Protein Sequence
- >LOC_Os06g44840.1
MDSLRLRPSLLAARAPGAASLPPLRRDHFLPPLCSIHRNGKRPVSLSSQRTQGPSFDQCQKFFGWKSSHHRIPHRPTSSSADASGQPLQSSAEAHDSSSIWKPISSSLDAFYRFSRPHTVIGTALSIVSVSLLAVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLASGEYSPATGVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILAVRAVIVQLAFFLHIQTFVFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFGIKSFSVRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHAILAAILWNRSRSIDLTSKTAITSFYMFIWKLFYAEYLLIPLVR* - >LOC_Os06g44840.2
MDSLRLRPSLLAARAPGAASLPPLRRDHFLPPLCSIHRNGKRPVSLSSQRTQGPSFDQCQKFFGWKSSHHRIPHRPTSSSADASGQPLQSSAEAHDSSSIWKPISSSLDAFYRFSRPHTVIGTALSIVSVSLLAVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLASGEYSPATGVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILAVRAVIVQLAFFLHIQTFVFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFGIKSFSVRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHAILAAILWNRSRSIDLTSKTAITSFYMFIWKLFYAEYLLIPLVR*