Information report for Sdt97
Gene Details
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Functional Descriptions
- Sequence of the candidate genes in the target region revealed that a base transversion from G to C occurred in the 5’ untranslated region of Sdt97 qRT-PCR results confirmed that the transversion induced obvious change in the expression pattern of Sdt97 at different growth and developmental stages.
- A semi- dwarf mutant gene Sdt97 was previously described.
Literature and News
Gene Resources
- UniProt: A0A0P0WZD8
- EMBL: AP014962
- AlphaFoldDB: A0A0P0WZD8
- EnsemblPlants: Os06t0649800-01
- Gramene: Os06t0649800-01
- KEGG: osa:4341682
- Orthologous matrix: IFMDFDP
- InterPro: IPR005019, IPR011257
- PANTHER: PTHR31116, PTHR31116:SF5
- SUPFAM: SSF48150
- Gene3D: 1.10.340.30
- OrthoDB: A0A0P0WZD8
- SWISS-MODEL: A0A0P0WZD8
- eggNOG: ENOG502QQTH
Sequences
cDNA Sequence
- >LOC_Os06g44050.1
CCTCTCCTCTCCTCTCACCACCAACCTCCTCGTCCTCCTCTCCTTGGATTCCACTCCTCTCGACCACCACCACCAGCAGCAGCAGTAGCTGTAGCTTGCTGCTGCAGCCTGCCTCTCCTCGATCTCCGGGCTCCCCTCTTGCCTCCGCCGTGGCGCCGTGGTGTGGTTTCTTGGTGAGCCGTGCAATGCGGGGCGGAAGCTGCCGAACCCTGGGCTGGGATTAGGGTTCTTGTCTCGGAGAGTCGGAGGCTTTGGTGTAGTTCTTGTTTGGATTTCGAGGCTGTGTGTTCTTGGGCTTCGAGGAGGAGCGGTTTTCTTTGGTATCGAAGATTTGATTCTTTCGGCGGCGGGAATGGCGGCTTCCATGGCCGGAGCGCCGAGGGTCCGGTCGCTGAACGTGGCGGAGACGGACGCGGACGCGAGGCCGGTGCTGGTGCCGGGTGGCAACAAGGCCAGGTCGGGCCCCGCCGCCGCCCGGAAGCCCTCGCCGAAGCCGCTGCGGAAGGCGGACACGGCGGCGAGGACGCCGGAGAAACCCGCCGCCGCCGCCGCCGCCGCCGCTCCTCCGGCCAAGGAGGAGGAGGGCGCCAAGAAGAATGCCGGCGGCGGCGTGGGCAAGGGCTCGTCCCCCTTGCCGTCGCCGAGGCGGGCGCAGCCGCAGCCGCCGCCGGCGAGGAAGGCGGCGCACGACGCGCCCGTGCACCTCAACCTGTCGCTCAACGCGTCCTGCTCCTCGGATGCCTCCGTGGAGTCGCTCCGCGGCCGGGACTCCTCCGGTGGGAGGCTGGAGAGGAGCTGGTCCAGGGTGGCGCCCGCCGTGCCGAGGCGGGGGAAGACTCCAGTGAAGGCGGCGGCGGCGGCGGCGGCGGCGGAGAAGGTTGCCGCCGATGCGGAGGTTGTCGCACCGGCCACACCGGAGGCGGGGAAGAGGAGGTGCGCGTGGGTGACTCCGACCAGTGATCCTTGCTATGTCATCTTCCATGATGAGGAGTGGGGTGTTCCAGTTCATGATGACAGGAGATTGTTTGAGCTGCTTGTACTGTCTGGTGCATTGGCCGAGCTCACATGGCCTGAAATTCTTAAAAGGAGGCAACTTTTCAGGGAAATTTTCGTGGACTTCGATCCTGTTGCTATCTCTAAAATAAATGAGAAGAAGCTTGTAGCACCAGGAAGTGTTGCCAACTCCCTTCTGTCAGAGCAAAAACTCCGAGCAGTTGTTGAAAATGCTCGACAGATACTTAAGATTGTAGATGAATTTGGATCCTTCGATCGATACTGTTGGGGCTTTTTGAACCACAAGCCAATAGTGAGCAAATTCCGATATCCAAGGCAAGTCCCTGTCAAGAGCCCCAAGGCAGACATGATCAGCAAAGACATGGTCCGAAGGGGTTTCCGAGGCGTGGGCCCAACAATCATATATTCCTTCATGCAGGCAGCAGGGCTGACCAATGATCACCTTGTCAGTTGCTTTCGGTTCAAAGAATGCAATGAAGCTCCAACTCTTTGCACGAGTGATACTAGCAATGCAAATTCAGAGGCAGATCTAAGTGCAGATGAACTGAGAACAAAAATCTGCAGCAAGGAGATGGCTGCAAAAGCAGAGCTGTTGAGGACGATCGGTACGCTTATCATTTCATAGGACCATGTGGAACAGTGATGCGGTTACTGTACCTGTATTGCCCATGTGTAGGTTGTGTGCTAGGTTATCCTCAAAATGAGTTTTAGGGATCAAAATGCTTTTGTGTATAAATCATTTGTGTCAGTAATGCAACCCAGTTTGTACATTGCTACCGGAGAGAAGGATGATGACCATTTTACTGATGCAGAAACTGTGAAAAATCTTCCTCAATCAGTTAACA
CDS Sequence
- >LOC_Os06g44050.1
ATGGCGGCTTCCATGGCCGGAGCGCCGAGGGTCCGGTCGCTGAACGTGGCGGAGACGGACGCGGACGCGAGGCCGGTGCTGGTGCCGGGTGGCAACAAGGCCAGGTCGGGCCCCGCCGCCGCCCGGAAGCCCTCGCCGAAGCCGCTGCGGAAGGCGGACACGGCGGCGAGGACGCCGGAGAAACCCGCCGCCGCCGCCGCCGCCGCCGCTCCTCCGGCCAAGGAGGAGGAGGGCGCCAAGAAGAATGCCGGCGGCGGCGTGGGCAAGGGCTCGTCCCCCTTGCCGTCGCCGAGGCGGGCGCAGCCGCAGCCGCCGCCGGCGAGGAAGGCGGCGCACGACGCGCCCGTGCACCTCAACCTGTCGCTCAACGCGTCCTGCTCCTCGGATGCCTCCGTGGAGTCGCTCCGCGGCCGGGACTCCTCCGGTGGGAGGCTGGAGAGGAGCTGGTCCAGGGTGGCGCCCGCCGTGCCGAGGCGGGGGAAGACTCCAGTGAAGGCGGCGGCGGCGGCGGCGGCGGCGGAGAAGGTTGCCGCCGATGCGGAGGTTGTCGCACCGGCCACACCGGAGGCGGGGAAGAGGAGGTGCGCGTGGGTGACTCCGACCAGTGATCCTTGCTATGTCATCTTCCATGATGAGGAGTGGGGTGTTCCAGTTCATGATGACAGGAGATTGTTTGAGCTGCTTGTACTGTCTGGTGCATTGGCCGAGCTCACATGGCCTGAAATTCTTAAAAGGAGGCAACTTTTCAGGGAAATTTTCGTGGACTTCGATCCTGTTGCTATCTCTAAAATAAATGAGAAGAAGCTTGTAGCACCAGGAAGTGTTGCCAACTCCCTTCTGTCAGAGCAAAAACTCCGAGCAGTTGTTGAAAATGCTCGACAGATACTTAAGATTGTAGATGAATTTGGATCCTTCGATCGATACTGTTGGGGCTTTTTGAACCACAAGCCAATAGTGAGCAAATTCCGATATCCAAGGCAAGTCCCTGTCAAGAGCCCCAAGGCAGACATGATCAGCAAAGACATGGTCCGAAGGGGTTTCCGAGGCGTGGGCCCAACAATCATATATTCCTTCATGCAGGCAGCAGGGCTGACCAATGATCACCTTGTCAGTTGCTTTCGGTTCAAAGAATGCAATGAAGCTCCAACTCTTTGCACGAGTGATACTAGCAATGCAAATTCAGAGGCAGATCTAAGTGCAGATGAACTGAGAACAAAAATCTGCAGCAAGGAGATGGCTGCAAAAGCAGAGCTGTTGAGGACGATCGGTACGCTTATCATTTCATAG
Protein Sequence
- >LOC_Os06g44050.1
MAASMAGAPRVRSLNVAETDADARPVLVPGGNKARSGPAAARKPSPKPLRKADTAARTPEKPAAAAAAAAPPAKEEEGAKKNAGGGVGKGSSPLPSPRRAQPQPPPARKAAHDAPVHLNLSLNASCSSDASVESLRGRDSSGGRLERSWSRVAPAVPRRGKTPVKAAAAAAAAEKVAADAEVVAPATPEAGKRRCAWVTPTSDPCYVIFHDEEWGVPVHDDRRLFELLVLSGALAELTWPEILKRRQLFREIFVDFDPVAISKINEKKLVAPGSVANSLLSEQKLRAVVENARQILKIVDEFGSFDRYCWGFLNHKPIVSKFRYPRQVPVKSPKADMISKDMVRRGFRGVGPTIIYSFMQAAGLTNDHLVSCFRFKECNEAPTLCTSDTSNANSEADLSADELRTKICSKEMAAKAELLRTIGTLIIS*