Information report for HOS59
Gene Details
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Functional Descriptions
- KNOX II transcription factor HOS59 functions in regulating rice grain size.
- Meanwhile, our IP-MS datasets showed that HOS59 was closely associated with BELL family proteins, some grain size regulators (OsSPL13, OsSPL16, OsSPL18, SLG, etc.
- Compared with wild-type plants, the HOS59 mutants have longer grains and increased glume cell length, a loose plant architecture, and drooping leaves, while the overexpression lines showed smaller grain size, erect leaves, and lower plant height.
- The qRT-PCR results showed that mutation of the HOS59 gene led to upregulation of some grain size-related genes such as OsSPL13, OsSPL18, and PGL2.
- In summary, our results indicate that HOS59 may be a repressor of the downstream target genes, negatively regulating glume cell length, rice grain size, plant architecture, etc.
Functional Keywords
Literature and News
Homologs
- Gossypium arboreum: Cotton_A_09092_BGI-A2_v1.0
- Gossypium hirsutum: GhKNL1_D08, GhKNL1_A08, Gh_D03G1492
- Nicotiana benthamiana: Niben101Scf09454g00008.1
- Nicotiana tabacum: XP_016448514.1, XP_016448513.1
- Populus trichocarpa: Potri.018G114100.1
- Solanum lycopersicum: Solyc12g010410.1.1
- Solanum tuberosum: PGSC0003DMP400013897
- Triticum aestivum: LRD
Sequences
cDNA Sequence
- >LOC_Os06g43860.4
GAAATGACAATCTTCCTAAGGCAATTTTTTTTACTTAATAAAAAAATGTTTTTTTTTCTTGCAGACCCATTATGTATTGCTCCTTTGTTCGTTCAAGGAACAACTACAGCAACATGTGCGTGTTCATGCAATGGAAGCAGTAATGGCTTGCTGGGAACTTGAACAAACTTTACAGAGCCTTACAGGGGCATCTCCTCGTGAAGGTTCTGGAGCAACTATGTCTGATGACGAAGACAATCAGGTTGATAGTGAGAGCAACATGTTTGATGGAAATGATGGATCAGATGGTATGGGCTTTGGCCCCTTAATGCTGACGGAGGGCGAGAGATCATTAGTTGAGCGTGTACGGCAAGAGCTGAAACATGAGCTTAAACAGGGGTACAGAGAAAAGCTTGTGGACATTAGGGAAGAGATACTCCGAAAGCGAAGAGCTGGAAAACTCCCAGGAGATACAGCGTCTACTTTGAAAGCATGGTGGCAGGCTCACTCTAAATGGCCATACCCAACTGAGGAGGACAAGGCTCGCTTGGTGCAGGAAACAGGGTTGCAACTAAAACAGATCAATAATTGGTTTATCAACCAACGTAAACGGAACTGGCACAGCAATCCTGCTTCATCCTCATCAGACAAAAGCAAGAGAAAAAGGTATCGTGTCGTGGACTTCTAACAGAAATTCCTTTTACATATTTTTGGTTTCCATTTTCCTGTCTCTGTCTGTTTATGCCTAGAAAAAGAAGCAATGCAGGTGATGGCAAGGCCGAGCAATCTTGGTAGAACGTGGTTGGAGAAGAAGTATATATATGTAAATAATGCATCCATTGTGAAGAATGCCAGTATATTTATTGCTCCCAAGATGGCGATTCGGACAGAAGCTTCCTGGGGCTAATTTATACGAAAGAAATTATGTCATGTTATAATTTTAGTCATGTGAAGCTATAGTGCGTATATATAGTGACTTACCAGAGAGTAGTTTTTATGTTTGCTGTTGGCTAGTGTGCATTTGTAGTTGGGACGTGCTGGCTGTCTCTCTACAGCTCGGTACAACCATGTATTTATAACGTGTTGTGAAGCATATGTTGTAAAATCGTGGAATGGGAGTGTTCTGCGATCCCCATATGTTGTTGTAATGTTGTATATTGATGACCATGCTGCAACGGCAGCATGTTTGTAACTCGTTATATCCTCAGGCTCTTGTGTTGTTACAAATTACAGAACTATATTGTCTTTAACGAGCATCTCCTGTTGAATTAATAATAGCCAGACAGTCAGATTTTTGTTGGATA - >LOC_Os06g43860.1
GAAATGACAATCTTCCTAAGGCAATTTTTTTTACTTAATAAAAAAATGTTTTTTTTTCTTGCAGACCCATTATGTATTGCTCCTTTGTTCGTTCAAGGAACAACTACAGCAACATGTGCGTGTTCATGCAATGGAAGCAGTAATGGCTTGCTGGGAACTTGAACAAACTTTACAGAGCCTTACAGGGGCATCTCCTCGTGAAGGTTCTGGAGCAACTATGTCTGATGACGAAGACAATCAGGTTGATAGTGAGAGCAACATGTTTGATGGAAATGATGGATCAGATGGTATGGGCTTTGGCCCCTTAATGCTGACGGAGGGCGAGAGATCATTAGTTGAGCGTGTACGGCAAGAGCTGAAACATGAGCTTAAACAGGGGTACAGAGAAAAGCTTGTGGACATTAGGGAAGAGATACTCCGAAAGCGAAGAGCTGGAAAACTCCCAGGAGATACAGCGTCTACTTTGAAAGCATGGTGGCAGGCTCACTCTAAATGGCCATACCCAACTGAGGAGGACAAGGCTCGCTTGGTGCAGGAAACAGGGTTGCAACTAAAACAGATCAATAATTGGTTTATCAACCAACGTAAACGGAACTGGCACAGCAATCCTGCTTCATCCTCATCAGACAAAAGCAAGAGAAAAAGGTATCGTGTCGTGGACTTCTAACAGAAATTCCTTTTACATATTTTTGGTTTCCATTTTCCTGTCTCTGTCTGTTTATGCCTAGAAAAAGAAGCAATGCAGGTGATGGCAAGGCCGAGCAATCTTGGTAGAACGTGGTTGGAGAAGAAGTATATATATGTAAATAATGCATCCATTGTGAAGAATGCCAGTATATTTATTGCTCCCAAGATGGCGATTCGGACAGAAGCTTCCTGGGGCTAATTTATACGAAAGAAATTATGTCATGTTATAATTTTAGTCATGTGAAGCTATAGTGCGTATATATAGTGACTTACCAGAGAGTAGTTTTTATGTTTGCTGTTGGCTAGTGTGCATTTGTAGTTGGGACGTGCTGGCTGTCTCTCTACAGCTCGGTACAACCATGTATTTATAACGTGTTGTGAAGCATATGTTGTAAAATCGTGGAATGGGAGTGTTCTGCGATCCCCATATGTTGTTGTAATGTTGTATATTGATGACCATGCTGCAACGGCAGCATGTTTGTAACTCGTTATATCCTCAGGCTCTTGTGTTGTTACAAATTACAGAACTATATTGTCTTTAACGAGCATCTCCTGTTGAATTAATAATAGCCAGACAGTCAGATTTTTGTTGGATA - >LOC_Os06g43860.2
GAAATGACAATCTTCCTAAGGCAATTTTTTTTACTTAATAAAAAAATGTTTTTTTTTCTTGCAGACCCATTATGTATTGCTCCTTTGTTCGTTCAAGGAACAACTACAGCAACATGTGCGTGTTCATGCAATGGAAGCAGTAATGGCTTGCTGGGAACTTGAACAAACTTTACAGAGCCTTACAGGGGCATCTCCTCGTGAAGGTTCTGGAGCAACTATGTCTGATGACGAAGACAATCAGGTTGATAGTGAGAGCAACATGTTTGATGGAAATGATGGATCAGATGGTATGGGCTTTGGCCCCTTAATGCTGACGGAGGGCGAGAGATCATTAGTTGAGCGTGTACGGCAAGAGCTGAAACATGAGCTTAAACAGGGGTACAGAGAAAAGCTTGTGGACATTAGGGAAGAGATACTCCGAAAGCGAAGAGCTGGAAAACTCCCAGGAGATACAGCGTCTACTTTGAAAGCATGGTGGCAGGCTCACTCTAAATGGCCATACCCAACTGAGGAGGACAAGGCTCGCTTGGTGCAGGAAACAGGGTTGCAACTAAAACAGATCAATAATTGGTTTATCAACCAACGTAAACGGAACTGGCACAGCAATCCTGCTTCATCCTCATCAGACAAAAGCAAGAGAAAAAGGTATCGTGTCGTGGACTTCTAACAGAAATTCCTTTTACATATTTTTGGTTTCCATTTTCCTGTCTCTGTCTGTTTATGCCTAGAAAAAGAAGCAATGCAGGTGATGGCAAGGCCGAGCAATCTTGGTAGAACGTGGTTGGAGAAGAAGTATATATATGTAAATAATGCATCCATTGTGAAGAATGCCAGTATATTTATTGCTCCCAAGATGGCGATTCGGACAGAAGCTTCCTGGGGCTAATTTATACGAAAGAAATTATGTCATGTTATAATTTTAGTCATGTGAAGCTATAGTGCGTATATATAGTGACTTACCAGAGAGTAGTTTTTATGTTTGCTGTTGGCTAGTGTGCATTTGTAGTTGGGACGTGCTGGCTGTCTCTCTACAGCTCGGTACAACCATGTATTTATAACGTGTTGTGAAGCATATGTTGTAAAATCGTGGAATGGGAGTGTTCTGCGATCCCCATATGTTGTTGTAATGTTGTATATTGATGACCATGCTGCAACGGCAGCATGTTTGTAACTCGTTATATCCTCAGGCTCTTGTGTTGTTACAAATTACAGAACTATATTGTCTTTAACGAGCATCTCCTGTTGAATTAATAATAGCCAGACAGTCAGATTTTTGTTGGATA
CDS Sequence
- >LOC_Os06g43860.4
ATGGAAGCAGTAATGGCTTGCTGGGAACTTGAACAAACTTTACAGAGCCTTACAGGGGCATCTCCTCGTGAAGGTTCTGGAGCAACTATGTCTGATGACGAAGACAATCAGGTTGATAGTGAGAGCAACATGTTTGATGGAAATGATGGATCAGATGGTATGGGCTTTGGCCCCTTAATGCTGACGGAGGGCGAGAGATCATTAGTTGAGCGTGTACGGCAAGAGCTGAAACATGAGCTTAAACAGGGGTACAGAGAAAAGCTTGTGGACATTAGGGAAGAGATACTCCGAAAGCGAAGAGCTGGAAAACTCCCAGGAGATACAGCGTCTACTTTGAAAGCATGGTGGCAGGCTCACTCTAAATGGCCATACCCAACTGAGGAGGACAAGGCTCGCTTGGTGCAGGAAACAGGGTTGCAACTAAAACAGATCAATAATTGGTTTATCAACCAACGTAAACGGAACTGGCACAGCAATCCTGCTTCATCCTCATCAGACAAAAGCAAGAGAAAAAGGTATCGTGTCGTGGACTTCTAA - >LOC_Os06g43860.1
ATGGAAGCAGTAATGGCTTGCTGGGAACTTGAACAAACTTTACAGAGCCTTACAGGGGCATCTCCTCGTGAAGGTTCTGGAGCAACTATGTCTGATGACGAAGACAATCAGGTTGATAGTGAGAGCAACATGTTTGATGGAAATGATGGATCAGATGGTATGGGCTTTGGCCCCTTAATGCTGACGGAGGGCGAGAGATCATTAGTTGAGCGTGTACGGCAAGAGCTGAAACATGAGCTTAAACAGGGGTACAGAGAAAAGCTTGTGGACATTAGGGAAGAGATACTCCGAAAGCGAAGAGCTGGAAAACTCCCAGGAGATACAGCGTCTACTTTGAAAGCATGGTGGCAGGCTCACTCTAAATGGCCATACCCAACTGAGGAGGACAAGGCTCGCTTGGTGCAGGAAACAGGGTTGCAACTAAAACAGATCAATAATTGGTTTATCAACCAACGTAAACGGAACTGGCACAGCAATCCTGCTTCATCCTCATCAGACAAAAGCAAGAGAAAAAGGTATCGTGTCGTGGACTTCTAA - >LOC_Os06g43860.2
ATGGAAGCAGTAATGGCTTGCTGGGAACTTGAACAAACTTTACAGAGCCTTACAGGGGCATCTCCTCGTGAAGGTTCTGGAGCAACTATGTCTGATGACGAAGACAATCAGGTTGATAGTGAGAGCAACATGTTTGATGGAAATGATGGATCAGATGGTATGGGCTTTGGCCCCTTAATGCTGACGGAGGGCGAGAGATCATTAGTTGAGCGTGTACGGCAAGAGCTGAAACATGAGCTTAAACAGGGGTACAGAGAAAAGCTTGTGGACATTAGGGAAGAGATACTCCGAAAGCGAAGAGCTGGAAAACTCCCAGGAGATACAGCGTCTACTTTGAAAGCATGGTGGCAGGCTCACTCTAAATGGCCATACCCAACTGAGGAGGACAAGGCTCGCTTGGTGCAGGAAACAGGGTTGCAACTAAAACAGATCAATAATTGGTTTATCAACCAACGTAAACGGAACTGGCACAGCAATCCTGCTTCATCCTCATCAGACAAAAGCAAGAGAAAAAGGTATCGTGTCGTGGACTTCTAA
Protein Sequence
- >LOC_Os06g43860.4
MEAVMACWELEQTLQSLTGASPREGSGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPASSSSDKSKRKRYRVVDF* - >LOC_Os06g43860.1
MEAVMACWELEQTLQSLTGASPREGSGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPASSSSDKSKRKRYRVVDF* - >LOC_Os06g43860.2
MEAVMACWELEQTLQSLTGASPREGSGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPASSSSDKSKRKRYRVVDF*